RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 KLHDC4Q8TBB5 520 aa19.5■□□□□ 0.71
SDF4-204ENST00000459994 CDCA5Q96FF9 252 aa19.5■□□□□ 0.71
SDF4-204ENST00000459994 CNNM1Q9NRU3 951 aa19.5■□□□□ 0.71
SDF4-204ENST00000459994 PCDHAC2Q9Y5I4 1007 aa19.5■□□□□ 0.71
SDF4-204ENST00000459994 SASH1O94885 1247 aa19.49■□□□□ 0.71
SDF4-204ENST00000459994 HSPA8P11142 646 aaKnown RBP19.49■□□□□ 0.71
SDF4-204ENST00000459994 ECE1P42892 770 aa19.49■□□□□ 0.71
SDF4-204ENST00000459994 LBX1P52954 281 aa19.49■□□□□ 0.71
SDF4-204ENST00000459994 HUNKP57058 714 aa19.49■□□□□ 0.71
SDF4-204ENST00000459994 MVPQ14764 893 aaKnown RBP19.49■□□□□ 0.71
SDF4-204ENST00000459994 LRRC24Q50LG9 513 aa19.49■□□□□ 0.71
SDF4-204ENST00000459994 PRAMEF18Q5VWM3 479 aa19.49■□□□□ 0.71
SDF4-204ENST00000459994 GBA2Q9HCG7 927 aaPredicted RBP19.49■□□□□ 0.71
SDF4-204ENST00000459994 PAPPA2Q9BXP8 1791 aa19.49■□□□□ 0.71
SDF4-204ENST00000459994 CASP8AP2Q9UKL3 1982 aa19.48■□□□□ 0.71
SDF4-204ENST00000459994 WNT10BO00744 389 aa19.48■□□□□ 0.71
SDF4-204ENST00000459994 SULF1Q8IWU6 871 aa19.48■□□□□ 0.71
SDF4-204ENST00000459994 TSKSQ9UJT2 592 aa19.48■□□□□ 0.71
SDF4-204ENST00000459994 COG6Q9Y2V7 657 aa19.48■□□□□ 0.71
SDF4-204ENST00000459994 RIPOR2Q9Y4F9 1068 aa19.48■□□□□ 0.71
SDF4-204ENST00000459994 AKAP11Q9UKA4 1901 aa19.48■□□□□ 0.71
SDF4-204ENST00000459994 IL1R1P14778 569 aa19.47■□□□□ 0.71
SDF4-204ENST00000459994 CTCFP49711 727 aaPredicted RBP19.47■□□□□ 0.71
SDF4-204ENST00000459994 MOB2Q70IA6 237 aa19.47■□□□□ 0.71
SDF4-204ENST00000459994 ITPRIPQ8IWB1 547 aa19.47■□□□□ 0.71
SDF4-204ENST00000459994 AIDAQ96BJ3 306 aa19.47■□□□□ 0.71
SDF4-204ENST00000459994 HHIPL1Q96JK4 782 aa19.47■□□□□ 0.71
SDF4-204ENST00000459994 DDX19BQ9UMR2 479 aa19.47■□□□□ 0.71
SDF4-204ENST00000459994 AOX1Q06278 1338 aa19.47■□□□□ 0.71
SDF4-204ENST00000459994 FAM155AB1AL88 458 aaPredicted RBP19.46■□□□□ 0.71
SDF4-204ENST00000459994 NEFLP07196 543 aa19.46■□□□□ 0.71
SDF4-204ENST00000459994 GYG1P46976 350 aa19.46■□□□□ 0.71
SDF4-204ENST00000459994 ZBED3Q96IU2 234 aaPredicted RBP19.46■□□□□ 0.71
SDF4-204ENST00000459994 CHMP4BQ9H444 224 aaKnown RBP19.46■□□□□ 0.71
SDF4-204ENST00000459994 MYO3BQ8WXR4 1341 aa19.46■□□□□ 0.71
SDF4-204ENST00000459994 CAPN15O75808 1086 aa19.45■□□□□ 0.7
SDF4-204ENST00000459994 MAP2K1Q02750 393 aaPredicted RBP19.45■□□□□ 0.7
SDF4-204ENST00000459994 CRBNQ96SW2 442 aa19.45■□□□□ 0.7
SDF4-204ENST00000459994 PITPNM2Q9BZ72 1349 aa19.45■□□□□ 0.7
SDF4-204ENST00000459994 F8W031 263 aaPredicted RBP19.44■□□□□ 0.7
SDF4-204ENST00000459994 ZBTB7BO15156 539 aaPredicted RBP19.44■□□□□ 0.7
SDF4-204ENST00000459994 ZNF804AQ7Z570 1209 aa19.44■□□□□ 0.7
SDF4-204ENST00000459994 C2orf69Q8N8R5 385 aa19.44■□□□□ 0.7
SDF4-204ENST00000459994 PRDM10Q9NQV6 1147 aa19.44■□□□□ 0.7
SDF4-204ENST00000459994 MAP2K2P36507 400 aa19.43■□□□□ 0.7
SDF4-204ENST00000459994 RFX5P48382 616 aaPredicted RBP19.43■□□□□ 0.7
SDF4-204ENST00000459994 RGMBQ6NW40 437 aa19.43■□□□□ 0.7
SDF4-204ENST00000459994 OGFOD1Q8N543 542 aa19.43■□□□□ 0.7
SDF4-204ENST00000459994 VGLL2Q8N8G2 317 aa19.43■□□□□ 0.7
SDF4-204ENST00000459994 FAM84BQ96KN1 310 aaPredicted RBP19.43■□□□□ 0.7
SDF4-204ENST00000459994 IRX6P78412 446 aaPredicted RBP19.42■□□□□ 0.7
SDF4-204ENST00000459994 AAMPQ13685 434 aa19.42■□□□□ 0.7
SDF4-204ENST00000459994 UBE4AQ14139 1066 aa19.42■□□□□ 0.7
SDF4-204ENST00000459994 TDRD7Q8NHU6 1098 aaKnown RBP19.42■□□□□ 0.7
SDF4-204ENST00000459994 GNAI3P08754 354 aa19.41■□□□□ 0.7
SDF4-204ENST00000459994 GRIK5Q16478 980 aa19.41■□□□□ 0.7
SDF4-204ENST00000459994 FZD1Q9UP38 647 aa19.41■□□□□ 0.7
SDF4-204ENST00000459994 IQSEC3Q9UPP2 1182 aaPredicted RBP19.41■□□□□ 0.7
SDF4-204ENST00000459994 OTOFQ9HC10 1997 aa19.41■□□□□ 0.7
SDF4-204ENST00000459994 ZNF157P51786 506 aaPredicted RBP19.4■□□□□ 0.7
SDF4-204ENST00000459994 EXOC6Q8TAG9 804 aa19.4■□□□□ 0.7
SDF4-204ENST00000459994 MEIS3Q99687 375 aa19.4■□□□□ 0.7
SDF4-204ENST00000459994 ZBTB40Q9NUA8 1239 aa19.4■□□□□ 0.7
SDF4-204ENST00000459994 HDAC5Q9UQL6 1122 aa19.4■□□□□ 0.7
SDF4-204ENST00000459994 MROH5Q6ZUA9 1318 aa19.4■□□□□ 0.7
SDF4-204ENST00000459994 SSC5DA1L4H1 1573 aa19.4■□□□□ 0.7
SDF4-204ENST00000459994 HIBADHP31937 336 aaKnown RBP19.39■□□□□ 0.69
SDF4-204ENST00000459994 PTPN12Q05209 780 aaKnown RBP19.39■□□□□ 0.69
SDF4-204ENST00000459994 CFAP100Q494V2 611 aa19.39■□□□□ 0.69
SDF4-204ENST00000459994 METTL24Q5JXM2 366 aa19.39■□□□□ 0.69
SDF4-204ENST00000459994 ERICH6BQ5W0A0 696 aa19.39■□□□□ 0.69
SDF4-204ENST00000459994 HDAC9Q9UKV0 1011 aa19.39■□□□□ 0.69
SDF4-204ENST00000459994 FAM205AQ6ZU69 1335 aa19.39■□□□□ 0.69
SDF4-204ENST00000459994 UBE2Q2LH0YL09 131 aa19.38■□□□□ 0.69
SDF4-204ENST00000459994 SLC10A3P09131 477 aa19.38■□□□□ 0.69
SDF4-204ENST00000459994 KIF23Q02241 960 aaPredicted RBP19.38■□□□□ 0.69
SDF4-204ENST00000459994 NOGQ13253 232 aa19.38■□□□□ 0.69
SDF4-204ENST00000459994 FBXO33Q7Z6M2 555 aa19.38■□□□□ 0.69
SDF4-204ENST00000459994 RASAL3Q86YV0 1011 aa19.38■□□□□ 0.69
SDF4-204ENST00000459994 PRMT6Q96LA8 375 aaPredicted RBP19.38■□□□□ 0.69
SDF4-204ENST00000459994 CLRN2A0PK11 232 aa19.37■□□□□ 0.69
SDF4-204ENST00000459994 PDE8BO95263 885 aa19.37■□□□□ 0.69
SDF4-204ENST00000459994 UBTFL1P0CB47 393 aaPredicted RBP19.37■□□□□ 0.69
SDF4-204ENST00000459994 FKBP1AP62942 108 aaKnown RBP19.37■□□□□ 0.69
SDF4-204ENST00000459994 PRKG1Q13976 671 aa19.37■□□□□ 0.69
SDF4-204ENST00000459994 DLGAP5Q15398 846 aa19.37■□□□□ 0.69
SDF4-204ENST00000459994 ATG9AQ7Z3C6 839 aa19.37■□□□□ 0.69
SDF4-204ENST00000459994 LRRFIP2Q9Y608 721 aaKnown RBP19.37■□□□□ 0.69
SDF4-204ENST00000459994 LAMB1P07942 1786 aa19.37■□□□□ 0.69
SDF4-204ENST00000459994 FGFR2P21802 821 aa19.36■□□□□ 0.69
SDF4-204ENST00000459994 BCAMP50895 628 aa19.36■□□□□ 0.69
SDF4-204ENST00000459994 MFSD14BQ5SR56 506 aa19.36■□□□□ 0.69
SDF4-204ENST00000459994 MTMR14Q8NCE2 650 aa19.36■□□□□ 0.69
SDF4-204ENST00000459994 BEGAINQ9BUH8 593 aa19.36■□□□□ 0.69
SDF4-204ENST00000459994 COL1A1P02452 1464 aaPredicted RBP19.35■□□□□ 0.69
SDF4-204ENST00000459994 SPDYE2BA6NHP3 402 aa19.35■□□□□ 0.69
SDF4-204ENST00000459994 EYA2O00167 538 aa19.35■□□□□ 0.69
SDF4-204ENST00000459994 GNAI2P04899 355 aa19.35■□□□□ 0.69
SDF4-204ENST00000459994 SPDYE6P0CI01 402 aa19.35■□□□□ 0.69
SDF4-204ENST00000459994 SIL1Q9H173 461 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms