RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 FAM8A1Q9UBU6 413 aa10.67□□□□□ -0.7
CKAP2-204ENST00000459902 UNCXA6NJT0 531 aa10.66□□□□□ -0.7
CKAP2-204ENST00000459902 FAM177BA6PVY3 158 aa10.66□□□□□ -0.7
CKAP2-204ENST00000459902 PIK3R2O00459 728 aa10.66□□□□□ -0.7
CKAP2-204ENST00000459902 USP17L7P0C7H9 530 aa10.66□□□□□ -0.7
CKAP2-204ENST00000459902 TXNDC11Q6PKC3 985 aa10.66□□□□□ -0.7
CKAP2-204ENST00000459902 ZNF576Q9H609 170 aa10.66□□□□□ -0.7
CKAP2-204ENST00000459902 MRS2Q9HD23 443 aa10.66□□□□□ -0.7
CKAP2-204ENST00000459902 XRCC5P13010 732 aaKnown RBP10.65□□□□□ -0.7
CKAP2-204ENST00000459902 GSTT1P30711 240 aa10.65□□□□□ -0.7
CKAP2-204ENST00000459902 CABP4P57796 275 aa10.65□□□□□ -0.7
CKAP2-204ENST00000459902 CLEC4MQ9H2X3 399 aaPredicted RBP10.65□□□□□ -0.7
CKAP2-204ENST00000459902 STK17AQ9UEE5 414 aa10.65□□□□□ -0.7
CKAP2-204ENST00000459902 AKAP2Q9Y2D5 859 aa10.65□□□□□ -0.7
CKAP2-204ENST00000459902 A0A0A0MRY4 1105 aa10.64□□□□□ -0.71
CKAP2-204ENST00000459902 H3BRJ5 948 aa10.64□□□□□ -0.71
CKAP2-204ENST00000459902 SOX1O00570 391 aaPredicted RBP10.64□□□□□ -0.71
CKAP2-204ENST00000459902 CTSHP09668 335 aa10.64□□□□□ -0.71
CKAP2-204ENST00000459902 MRPL58Q14197 206 aaKnown RBP10.64□□□□□ -0.71
CKAP2-204ENST00000459902 ZNF423Q2M1K9 1284 aa10.64□□□□□ -0.71
CKAP2-204ENST00000459902 VTI1BQ9UEU0 232 aa10.64□□□□□ -0.71
CKAP2-204ENST00000459902 DEAF1O75398 565 aaPredicted RBP10.63□□□□□ -0.71
CKAP2-204ENST00000459902 ESRRAP11474 423 aaPredicted RBP10.63□□□□□ -0.71
CKAP2-204ENST00000459902 PCDH1Q08174 1060 aa10.63□□□□□ -0.71
CKAP2-204ENST00000459902 IKBKEQ14164 716 aa10.63□□□□□ -0.71
CKAP2-204ENST00000459902 SETDB1Q15047 1291 aa10.63□□□□□ -0.71
CKAP2-204ENST00000459902 HGSNATQ68CP4 663 aa10.63□□□□□ -0.71
CKAP2-204ENST00000459902 FSCN2O14926 492 aa10.62□□□□□ -0.71
CKAP2-204ENST00000459902 FAAP100Q0VG06 881 aa10.62□□□□□ -0.71
CKAP2-204ENST00000459902 RPS26P11Q5JNZ5 115 aaPredicted RBP10.62□□□□□ -0.71
CKAP2-204ENST00000459902 DTWD1Q8N5C7 304 aa10.62□□□□□ -0.71
CKAP2-204ENST00000459902 MRRFQ96E11 262 aaKnown RBP10.62□□□□□ -0.71
CKAP2-204ENST00000459902 CARD10Q9BWT7 1032 aa10.62□□□□□ -0.71
CKAP2-204ENST00000459902 ZFYVE1Q9HBF4 777 aa10.62□□□□□ -0.71
CKAP2-204ENST00000459902 NOP53Q9NZM5 478 aaKnown RBP10.62□□□□□ -0.71
CKAP2-204ENST00000459902 SPDYE3A6NKU9 549 aa10.61□□□□□ -0.71
CKAP2-204ENST00000459902 FAM229AH3BQW9 127 aa10.61□□□□□ -0.71
CKAP2-204ENST00000459902 TRIM28Q13263 835 aaKnown RBP10.61□□□□□ -0.71
CKAP2-204ENST00000459902 FAM117BQ6P1L5 589 aa10.61□□□□□ -0.71
CKAP2-204ENST00000459902 FMR1NBQ8N0W7 255 aaPredicted RBP10.61□□□□□ -0.71
CKAP2-204ENST00000459902 SLC7A3Q8WY07 619 aa10.61□□□□□ -0.71
CKAP2-204ENST00000459902 BCL11AQ9H165 835 aa10.61□□□□□ -0.71
CKAP2-204ENST00000459902 KIAA1522Q9P206 1035 aaPredicted RBP10.61□□□□□ -0.71
CKAP2-204ENST00000459902 TM4SF5O14894 197 aa10.6□□□□□ -0.71
CKAP2-204ENST00000459902 COL8A1P27658 744 aa10.6□□□□□ -0.71
CKAP2-204ENST00000459902 RBM25P49756 843 aaKnown RBP10.6□□□□□ -0.71
CKAP2-204ENST00000459902 PIP4K2BP78356 416 aa10.6□□□□□ -0.71
CKAP2-204ENST00000459902 FBXO11Q86XK2 927 aa10.6□□□□□ -0.71
CKAP2-204ENST00000459902 GALNT11Q8NCW6 608 aa10.6□□□□□ -0.71
CKAP2-204ENST00000459902 B3GALT4O96024 378 aa10.59□□□□□ -0.71
CKAP2-204ENST00000459902 ITGAEP38570 1179 aa10.59□□□□□ -0.71
CKAP2-204ENST00000459902 ZNF157P51786 506 aaPredicted RBP10.59□□□□□ -0.71
CKAP2-204ENST00000459902 RAC1P63000 192 aa10.59□□□□□ -0.71
CKAP2-204ENST00000459902 MEI1Q5TIA1 1274 aa10.59□□□□□ -0.71
CKAP2-204ENST00000459902 MAP4K3Q8IVH8 894 aa10.59□□□□□ -0.71
CKAP2-204ENST00000459902 WNT8BQ93098 351 aa10.59□□□□□ -0.71
CKAP2-204ENST00000459902 KLHDC7BQ96G42 594 aa10.59□□□□□ -0.71
CKAP2-204ENST00000459902 SRA1Q9HD15 236 aaKnown RBP10.59□□□□□ -0.71
CKAP2-204ENST00000459902 SEC31BQ9NQW1 1179 aa10.59□□□□□ -0.71
CKAP2-204ENST00000459902 PPM1HQ9ULR3 514 aa10.59□□□□□ -0.71
CKAP2-204ENST00000459902 LDLRAD1Q5T700 205 aa10.58□□□□□ -0.72
CKAP2-204ENST00000459902 KLHL23Q8NBE8 558 aa10.58□□□□□ -0.72
CKAP2-204ENST00000459902 CRELD1Q96HD1 420 aa10.58□□□□□ -0.72
CKAP2-204ENST00000459902 OSGEPQ9NPF4 335 aa10.58□□□□□ -0.72
CKAP2-204ENST00000459902 VAMP1P23763 118 aa10.57□□□□□ -0.72
CKAP2-204ENST00000459902 C19orf57Q0VDD7 668 aa10.57□□□□□ -0.72
CKAP2-204ENST00000459902 PRRT3Q5FWE3 981 aa10.57□□□□□ -0.72
CKAP2-204ENST00000459902 TPTE2Q6XPS3 522 aa10.57□□□□□ -0.72
CKAP2-204ENST00000459902 ANKRD24Q8TF21 1146 aa10.57□□□□□ -0.72
CKAP2-204ENST00000459902 BACH2Q9BYV9 841 aa10.57□□□□□ -0.72
CKAP2-204ENST00000459902 SOX17Q9H6I2 414 aaPredicted RBP10.57□□□□□ -0.72
CKAP2-204ENST00000459902 USP31Q70CQ4 1352 aa10.56□□□□□ -0.72
CKAP2-204ENST00000459902 DLL1O00548 723 aa10.56□□□□□ -0.72
CKAP2-204ENST00000459902 FBXO24O75426 580 aa10.56□□□□□ -0.72
CKAP2-204ENST00000459902 ARL4DP49703 201 aa10.56□□□□□ -0.72
CKAP2-204ENST00000459902 TAF1CQ15572 869 aaPredicted RBP10.56□□□□□ -0.72
CKAP2-204ENST00000459902 TTF2Q9UNY4 1162 aaKnown RBP10.56□□□□□ -0.72
CKAP2-204ENST00000459902 DDX3YO15523 660 aaKnown RBP10.55□□□□□ -0.72
CKAP2-204ENST00000459902 ELNP15502 786 aa10.55□□□□□ -0.72
CKAP2-204ENST00000459902 CD68P34810 354 aaPredicted RBP10.55□□□□□ -0.72
CKAP2-204ENST00000459902 SUZ12Q15022 739 aaKnown RBP10.55□□□□□ -0.72
CKAP2-204ENST00000459902 GRIK4Q16099 956 aa10.55□□□□□ -0.72
CKAP2-204ENST00000459902 NECAB3Q96P71 396 aaPredicted RBP10.55□□□□□ -0.72
CKAP2-204ENST00000459902 TMEM39AQ9NV64 488 aa10.55□□□□□ -0.72
CKAP2-204ENST00000459902 KCNK4Q9NYG8 393 aa10.55□□□□□ -0.72
CKAP2-204ENST00000459902 GPN3Q9UHW5 284 aaPredicted RBP10.55□□□□□ -0.72
CKAP2-204ENST00000459902 SPATA31C1P0DKV0 1188 aa10.54□□□□□ -0.72
CKAP2-204ENST00000459902 GSTM4Q03013 218 aa10.54□□□□□ -0.72
CKAP2-204ENST00000459902 FOXD4L6Q3SYB3 417 aaPredicted RBP10.54□□□□□ -0.72
CKAP2-204ENST00000459902 FOXD4L3Q6VB84 417 aaPredicted RBP10.54□□□□□ -0.72
CKAP2-204ENST00000459902 RNF225M0QZC1 329 aaPredicted RBP10.53□□□□□ -0.72
CKAP2-204ENST00000459902 RECKO95980 971 aa10.53□□□□□ -0.72
CKAP2-204ENST00000459902 ST13P50502 369 aaKnown RBP10.53□□□□□ -0.72
CKAP2-204ENST00000459902 TSNAXIP1Q2TAA8 658 aa10.53□□□□□ -0.72
CKAP2-204ENST00000459902 TMEM87AQ8NBN3 555 aa10.53□□□□□ -0.72
CKAP2-204ENST00000459902 CEP44Q9C0F1 390 aa10.53□□□□□ -0.72
CKAP2-204ENST00000459902 ENC1O14682 589 aa10.52□□□□□ -0.73
CKAP2-204ENST00000459902 ADAM11O75078 769 aa10.52□□□□□ -0.73
CKAP2-204ENST00000459902 NLRP12P59046 1061 aa10.52□□□□□ -0.73
CKAP2-204ENST00000459902 SHISA2Q6UWI4 295 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms