RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 KRT32Q14532 448 aa6.99□□□□□ -1.29
RNU1-88P-201ENST00000459274 R3HDM1Q15032 1099 aaKnown RBP6.99□□□□□ -1.29
RNU1-88P-201ENST00000459274 DZIP1Q86YF9 867 aaKnown RBP6.99□□□□□ -1.29
RNU1-88P-201ENST00000459274 UPF1Q92900 1129 aaKnown RBP eCLIP6.99□□□□□ -1.29
RNU1-88P-201ENST00000459274 FBXW7Q969H0 707 aa6.99□□□□□ -1.29
RNU1-88P-201ENST00000459274 SPON1Q9HCB6 807 aa6.99□□□□□ -1.29
RNU1-88P-201ENST00000459274 SNRKQ9NRH2 765 aa6.99□□□□□ -1.29
RNU1-88P-201ENST00000459274 TLR7Q9NYK1 1049 aaKnown RBP6.99□□□□□ -1.29
RNU1-88P-201ENST00000459274 ATF5Q9Y2D1 282 aaPredicted RBP6.99□□□□□ -1.29
RNU1-88P-201ENST00000459274 U3KPZ7 1027 aaPredicted RBP6.99□□□□□ -1.29
RNU1-88P-201ENST00000459274 MAST3O60307 1309 aa6.99□□□□□ -1.29
RNU1-88P-201ENST00000459274 SALL3Q9BXA9 1300 aa6.99□□□□□ -1.29
RNU1-88P-201ENST00000459274 ARAP2Q8WZ64 1704 aa6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 KLRG2A4D1S0 409 aaPredicted RBP6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 ZBTB7AO95365 584 aa6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 BAG3O95817 575 aa6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 LDHBP07195 334 aaKnown RBP6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 SLC3A2P08195 630 aaKnown RBP6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 PLCG2P16885 1265 aa6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 FGFR2P21802 821 aa6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 ZAP70P43403 619 aa6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 GYG1P46976 350 aa6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 MCM2P49736 904 aa6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 BCAMP50895 628 aa6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 ANAPC15P60006 121 aa6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 CHAF1AQ13111 956 aaPredicted RBP6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 RABEP1Q15276 862 aa6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 IMMTQ16891 758 aaKnown RBP6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 AMIGO3Q86WK7 504 aa6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 VGLL2Q8N8G2 317 aa6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 APPBP2Q92624 585 aa6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 IPO9Q96P70 1041 aaKnown RBP6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 COA1Q9GZY4 146 aa6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 ANO8Q9HCE9 1232 aaPredicted RBP6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 PODXL2Q9NZ53 605 aa6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 HMG20BQ9P0W2 317 aa6.98□□□□□ -1.29
RNU1-88P-201ENST00000459274 SGSM2O43147 1006 aa6.97□□□□□ -1.29
RNU1-88P-201ENST00000459274 HMGB1P09429 215 aaKnown RBP6.97□□□□□ -1.29
RNU1-88P-201ENST00000459274 ADORA1P30542 326 aa6.97□□□□□ -1.29
RNU1-88P-201ENST00000459274 MCAMP43121 646 aa6.97□□□□□ -1.29
RNU1-88P-201ENST00000459274 PHKA1P46020 1223 aa6.97□□□□□ -1.29
RNU1-88P-201ENST00000459274 RBM25P49756 843 aaKnown RBP6.97□□□□□ -1.29
RNU1-88P-201ENST00000459274 NMIQ13287 307 aaPredicted RBP6.97□□□□□ -1.29
RNU1-88P-201ENST00000459274 UBE3CQ15386 1083 aa6.97□□□□□ -1.29
RNU1-88P-201ENST00000459274 CCDC93Q567U6 631 aa6.97□□□□□ -1.29
RNU1-88P-201ENST00000459274 DALRD3Q5D0E6 543 aaKnown RBP6.97□□□□□ -1.29
RNU1-88P-201ENST00000459274 NAA16Q6N069 864 aaPredicted RBP6.97□□□□□ -1.29
RNU1-88P-201ENST00000459274 PRPF40BQ6NWY9 871 aaKnown RBP6.97□□□□□ -1.29
RNU1-88P-201ENST00000459274 JDP2Q8WYK2 163 aa6.97□□□□□ -1.29
RNU1-88P-201ENST00000459274 TBC1D32Q96NH3 1257 aa6.97□□□□□ -1.29
RNU1-88P-201ENST00000459274 USP26Q9BXU7 913 aa6.97□□□□□ -1.29
RNU1-88P-201ENST00000459274 VPS33BQ9H267 617 aa6.97□□□□□ -1.29
RNU1-88P-201ENST00000459274 NRXN2Q9P2S2 1712 aa6.97□□□□□ -1.29
RNU1-88P-201ENST00000459274 ZNF219Q9P2Y4 722 aaPredicted RBP6.97□□□□□ -1.29
RNU1-88P-201ENST00000459274 CD2APQ9Y5K6 639 aa6.97□□□□□ -1.29
RNU1-88P-201ENST00000459274 CCDC171Q6TFL3 1326 aa6.97□□□□□ -1.29
RNU1-88P-201ENST00000459274 ANKRD31Q8N7Z5 1873 aa6.96□□□□□ -1.29
RNU1-88P-201ENST00000459274 MAGEB6P1A0A0J9YX57 407 aa6.96□□□□□ -1.3
RNU1-88P-201ENST00000459274 RIMBP2O15034 1052 aa6.96□□□□□ -1.3
RNU1-88P-201ENST00000459274 CYP7A1P22680 504 aa6.96□□□□□ -1.3
RNU1-88P-201ENST00000459274 GPSM2P81274 684 aa6.96□□□□□ -1.3
RNU1-88P-201ENST00000459274 RASGRF1Q13972 1273 aa6.96□□□□□ -1.3
RNU1-88P-201ENST00000459274 ANKRD1Q15327 319 aa6.96□□□□□ -1.3
RNU1-88P-201ENST00000459274 C15orf52Q6ZUT6 534 aaKnown RBP6.96□□□□□ -1.3
RNU1-88P-201ENST00000459274 C3orf67Q6ZVT6 689 aa6.96□□□□□ -1.3
RNU1-88P-201ENST00000459274 PODNQ7Z5L7 613 aa6.96□□□□□ -1.3
RNU1-88P-201ENST00000459274 FBXO33Q7Z6M2 555 aa6.96□□□□□ -1.3
RNU1-88P-201ENST00000459274 RALYLQ86SE5 291 aaKnown RBP6.96□□□□□ -1.3
RNU1-88P-201ENST00000459274 MAGEB6Q8N7X4 407 aa6.96□□□□□ -1.3
RNU1-88P-201ENST00000459274 FAM84BQ96KN1 310 aaPredicted RBP6.96□□□□□ -1.3
RNU1-88P-201ENST00000459274 DSCC1Q9BVC3 393 aa6.96□□□□□ -1.3
RNU1-88P-201ENST00000459274 ZNF287Q9HBT7 754 aa6.96□□□□□ -1.3
RNU1-88P-201ENST00000459274 IQSEC3Q9UPP2 1182 aaPredicted RBP6.96□□□□□ -1.3
RNU1-88P-201ENST00000459274 CYP46A1Q9Y6A2 500 aa6.96□□□□□ -1.3
RNU1-88P-201ENST00000459274 PDS5AQ29RF7 1337 aaKnown RBP6.96□□□□□ -1.3
RNU1-88P-201ENST00000459274 AKAP11Q9UKA4 1901 aa6.95□□□□□ -1.3
RNU1-88P-201ENST00000459274 MED23Q9ULK4 1368 aa6.95□□□□□ -1.3
RNU1-88P-201ENST00000459274 ERICH2A1L162 156 aa6.95□□□□□ -1.3
RNU1-88P-201ENST00000459274 ZNF213O14771 459 aa6.95□□□□□ -1.3
RNU1-88P-201ENST00000459274 CYP2E1P05181 493 aaPredicted RBP6.95□□□□□ -1.3
RNU1-88P-201ENST00000459274 TDO2P48775 406 aa6.95□□□□□ -1.3
RNU1-88P-201ENST00000459274 NEK4P51957 841 aa6.95□□□□□ -1.3
RNU1-88P-201ENST00000459274 SART3Q15020 963 aaKnown RBP6.95□□□□□ -1.3
RNU1-88P-201ENST00000459274 ZMYM1Q5SVZ6 1142 aa6.95□□□□□ -1.3
RNU1-88P-201ENST00000459274 TTLL5Q6EMB2 1281 aa6.95□□□□□ -1.3
RNU1-88P-201ENST00000459274 OGFOD1Q8N543 542 aa6.95□□□□□ -1.3
RNU1-88P-201ENST00000459274 TBC1D16Q8TBP0 767 aa6.95□□□□□ -1.3
RNU1-88P-201ENST00000459274 CRNKL1Q9BZJ0 848 aaKnown RBP6.95□□□□□ -1.3
RNU1-88P-201ENST00000459274 NAPBQ9H115 298 aa6.95□□□□□ -1.3
RNU1-88P-201ENST00000459274 HDAC9Q9UKV0 1011 aa6.95□□□□□ -1.3
RNU1-88P-201ENST00000459274 SUGT1Q9Y2Z0 365 aa6.95□□□□□ -1.3
RNU1-88P-201ENST00000459274 TNRC6CQ9HCJ0 1690 aaKnown RBP6.95□□□□□ -1.3
RNU1-88P-201ENST00000459274 A0A1B0GUL6 1792 aa6.95□□□□□ -1.3
RNU1-88P-201ENST00000459274 RPAP1Q9BWH6 1393 aaPredicted RBP6.95□□□□□ -1.3
RNU1-88P-201ENST00000459274 MYH2Q9UKX2 1941 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 A0A0G2JLW4 131 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 PSDA5PKW4 1024 aaPredicted RBP6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 PATL2C9JE40 543 aaKnown RBP6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 PPIP5K2O43314 1243 aa6.94□□□□□ -1.3
RNU1-88P-201ENST00000459274 C21orf2O43822 256 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms