RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 CCDC183Q5T5S1 534 aa12.25□□□□□ -0.45
AMBRA1-202ENST00000458649 CCDC174Q6PII3 467 aa12.25□□□□□ -0.45
AMBRA1-202ENST00000458649 CRACR2AQ9BSW2 395 aa12.25□□□□□ -0.45
AMBRA1-202ENST00000458649 ORC3Q9UBD5 711 aaPredicted RBP12.25□□□□□ -0.45
AMBRA1-202ENST00000458649 PLEKHF1Q96S99 279 aa12.25□□□□□ -0.45
AMBRA1-202ENST00000458649 ATP7BP35670 1465 aa12.25□□□□□ -0.45
AMBRA1-202ENST00000458649 RTN1Q16799 776 aa12.25□□□□□ -0.45
AMBRA1-202ENST00000458649 FAM114A1Q8IWE2 563 aa12.25□□□□□ -0.45
AMBRA1-202ENST00000458649 METTL22Q9BUU2 404 aaPredicted RBP12.25□□□□□ -0.45
AMBRA1-202ENST00000458649 POLR3GO15318 223 aaPredicted RBP12.24□□□□□ -0.45
AMBRA1-202ENST00000458649 CCT2P78371 535 aaKnown RBP12.24□□□□□ -0.45
AMBRA1-202ENST00000458649 SYCP3Q8IZU3 236 aa12.24□□□□□ -0.45
AMBRA1-202ENST00000458649 RRP36Q96EU6 259 aaKnown RBP12.24□□□□□ -0.45
AMBRA1-202ENST00000458649 TEX11Q8IYF3 940 aa12.24□□□□□ -0.45
AMBRA1-202ENST00000458649 KIF18AQ8NI77 898 aa12.24□□□□□ -0.45
AMBRA1-202ENST00000458649 ARHGAP31Q2M1Z3 1444 aa12.24□□□□□ -0.45
AMBRA1-202ENST00000458649 KRT222Q8N1A0 295 aa12.24□□□□□ -0.45
AMBRA1-202ENST00000458649 HAND2P61296 217 aa12.24□□□□□ -0.45
AMBRA1-202ENST00000458649 SLC26A6Q9BXS9 759 aa12.24□□□□□ -0.45
AMBRA1-202ENST00000458649 USP19O94966 1318 aa12.24□□□□□ -0.45
AMBRA1-202ENST00000458649 ERBB4Q15303 1308 aa12.24□□□□□ -0.45
AMBRA1-202ENST00000458649 RNF113AO15541 343 aaKnown RBP12.24□□□□□ -0.45
AMBRA1-202ENST00000458649 BMS1Q14692 1282 aaKnown RBP12.24□□□□□ -0.45
AMBRA1-202ENST00000458649 PTPN14Q15678 1187 aa12.24□□□□□ -0.45
AMBRA1-202ENST00000458649 CLGNO14967 610 aa12.23□□□□□ -0.45
AMBRA1-202ENST00000458649 CHMLP26374 656 aa12.23□□□□□ -0.45
AMBRA1-202ENST00000458649 CACNA2D4Q7Z3S7 1137 aa12.23□□□□□ -0.45
AMBRA1-202ENST00000458649 BICD1Q96G01 975 aa12.23□□□□□ -0.45
AMBRA1-202ENST00000458649 GLT8D2Q9H1C3 349 aa12.23□□□□□ -0.45
AMBRA1-202ENST00000458649 BICC1Q9H694 974 aaKnown RBP12.23□□□□□ -0.45
AMBRA1-202ENST00000458649 ANO10Q9NW15 660 aa12.23□□□□□ -0.45
AMBRA1-202ENST00000458649 ZNF521Q96K83 1311 aa12.23□□□□□ -0.45
AMBRA1-202ENST00000458649 MAP3K9P80192 1104 aa12.23□□□□□ -0.45
AMBRA1-202ENST00000458649 GUCY1B3Q02153 619 aa12.23□□□□□ -0.45
AMBRA1-202ENST00000458649 UNC13BO14795 1591 aa12.23□□□□□ -0.45
AMBRA1-202ENST00000458649 GNA11P29992 359 aa12.23□□□□□ -0.45
AMBRA1-202ENST00000458649 FAM193AP78312 1265 aa12.23□□□□□ -0.45
AMBRA1-202ENST00000458649 CAMK4Q16566 473 aa12.23□□□□□ -0.45
AMBRA1-202ENST00000458649 PAIP2Q9BPZ3 127 aaKnown RBP12.23□□□□□ -0.45
AMBRA1-202ENST00000458649 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.23□□□□□ -0.457e-7■■□□□ 12.6
AMBRA1-202ENST00000458649 ANKRD62A6NC57 917 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 EYA2O00167 538 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 EPB41L2O43491 1005 aaKnown RBP12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 LIG1P18858 919 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 NAPAP54920 295 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 FERMT1Q9BQL6 677 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 RAD50Q92878 1312 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 SEPT7Q16181 437 aaKnown RBP12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 KLHL40Q2TBA0 621 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 KRT27Q7Z3Y8 459 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 GDPD2Q9HCC8 539 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 SLC5A4Q9NY91 659 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 BCS1LQ9Y276 419 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 ITGA6P23229 1130 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 EIF4A1P60842 406 aaKnown RBP12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 NMIQ13287 307 aaPredicted RBP12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 SPA17Q15506 151 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 USP48Q86UV5 1035 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 BRF1Q92994 677 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 USP26Q9BXU7 913 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 ZNF408Q9H9D4 720 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 FBXO3Q9UK99 471 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 WWC3Q9ULE0 1092 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 KIF24Q5T7B8 1368 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 IDEP14735 1019 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 KIF22Q14807 665 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 TMC4Q7Z404 712 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 KIAA1328Q86T90 577 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 CARD10Q9BWT7 1032 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 RMND1Q9NWS8 449 aa12.22□□□□□ -0.45
AMBRA1-202ENST00000458649 KLF18A0A0U1RQI7 1052 aa12.21□□□□□ -0.45
AMBRA1-202ENST00000458649 PPIP5K2O43314 1243 aa12.21□□□□□ -0.45
AMBRA1-202ENST00000458649 CCDC172P0C7W6 258 aa12.21□□□□□ -0.45
AMBRA1-202ENST00000458649 CNNM3Q8NE01 707 aa12.21□□□□□ -0.45
AMBRA1-202ENST00000458649 ROBO2Q9HCK4 1378 aa12.21□□□□□ -0.45
AMBRA1-202ENST00000458649 MROH5Q6ZUA9 1318 aa12.21□□□□□ -0.45
AMBRA1-202ENST00000458649 DLGAP5Q15398 846 aa12.21□□□□□ -0.45
AMBRA1-202ENST00000458649 CLASP1Q7Z460 1538 aa12.21□□□□□ -0.45
AMBRA1-202ENST00000458649 ABCC4O15439 1325 aa12.21□□□□□ -0.45
AMBRA1-202ENST00000458649 DNAJC10Q8IXB1 793 aa12.21□□□□□ -0.45
AMBRA1-202ENST00000458649 MAGEB6Q8N7X4 407 aa12.21□□□□□ -0.45
AMBRA1-202ENST00000458649 OTUD7AQ8TE49 926 aaPredicted RBP12.21□□□□□ -0.45
AMBRA1-202ENST00000458649 TFIP11Q9UBB9 837 aaKnown RBP12.21□□□□□ -0.45
AMBRA1-202ENST00000458649 HEATR3Q7Z4Q2 680 aa12.21□□□□□ -0.46
AMBRA1-202ENST00000458649 IL17REQ8NFR9 667 aa12.21□□□□□ -0.46
AMBRA1-202ENST00000458649 ZSCAN16Q9H4T2 348 aaPredicted RBP12.21□□□□□ -0.46
AMBRA1-202ENST00000458649 IVLP07476 585 aa12.2□□□□□ -0.46
AMBRA1-202ENST00000458649 TFCP2Q12800 502 aa12.2□□□□□ -0.46
AMBRA1-202ENST00000458649 PABPC4Q13310 644 aaKnown RBP eCLIP12.2□□□□□ -0.464e-7■■■■■ 37.3
AMBRA1-202ENST00000458649 CCDC91Q7Z6B0 441 aa12.2□□□□□ -0.46
AMBRA1-202ENST00000458649 THRAP3Q9Y2W1 955 aaKnown RBP12.2□□□□□ -0.46
AMBRA1-202ENST00000458649 DKC1O60832 514 aaKnown RBP eCLIP12.2□□□□□ -0.464e-8■■■■■ 36.5
AMBRA1-202ENST00000458649 GBP2P32456 591 aaPredicted RBP12.2□□□□□ -0.46
AMBRA1-202ENST00000458649 ENOX2Q16206 610 aaKnown RBP12.2□□□□□ -0.46
AMBRA1-202ENST00000458649 SLC4A8Q2Y0W8 1093 aa12.2□□□□□ -0.46
AMBRA1-202ENST00000458649 MAP9Q49MG5 647 aa12.2□□□□□ -0.46
AMBRA1-202ENST00000458649 FAM177A1Q8N128 213 aaPredicted RBP12.2□□□□□ -0.46
AMBRA1-202ENST00000458649 GPHNQ9NQX3 736 aaPredicted RBP12.2□□□□□ -0.46
AMBRA1-202ENST00000458649 RBM28Q9NW13 759 aaKnown RBP12.2□□□□□ -0.46
AMBRA1-202ENST00000458649 NOD1Q9Y239 953 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms