RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 SKAP1Q86WV1 359 aa20.6■□□□□ 0.89
TRIM39-211ENST00000458516 PLEKHM2Q8IWE5 1019 aa20.6■□□□□ 0.89
TRIM39-211ENST00000458516 KCNQ5Q9NR82 932 aa20.6■□□□□ 0.89
TRIM39-211ENST00000458516 ECHDC1Q9NTX5 307 aa20.6■□□□□ 0.89
TRIM39-211ENST00000458516 STAP2Q9UGK3 403 aa20.6■□□□□ 0.89
TRIM39-211ENST00000458516 PDE1AP54750 535 aa20.59■□□□□ 0.89
TRIM39-211ENST00000458516 PI4K2BQ8TCG2 481 aa20.59■□□□□ 0.89
TRIM39-211ENST00000458516 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.59■□□□□ 0.89
TRIM39-211ENST00000458516 GPATCH3Q96I76 525 aa20.59■□□□□ 0.89
TRIM39-211ENST00000458516 AK9Q5TCS8 1911 aa20.59■□□□□ 0.89
TRIM39-211ENST00000458516 PDS5AQ29RF7 1337 aaKnown RBP20.58■□□□□ 0.89
TRIM39-211ENST00000458516 FAM205AQ6ZU69 1335 aa20.58■□□□□ 0.89
TRIM39-211ENST00000458516 ZNF541Q9H0D2 1346 aa20.58■□□□□ 0.89
TRIM39-211ENST00000458516 ATP5JP18859 108 aa20.58■□□□□ 0.89
TRIM39-211ENST00000458516 PI16Q6UXB8 463 aa20.58■□□□□ 0.89
TRIM39-211ENST00000458516 HMG20BQ9P0W2 317 aa20.58■□□□□ 0.89
TRIM39-211ENST00000458516 DENND2AQ9ULE3 1009 aa20.58■□□□□ 0.89
TRIM39-211ENST00000458516 MYH7P12883 1935 aa20.58■□□□□ 0.88
TRIM39-211ENST00000458516 AOX1Q06278 1338 aa20.57■□□□□ 0.88
TRIM39-211ENST00000458516 FRAT2O75474 233 aaPredicted RBP20.57■□□□□ 0.88
TRIM39-211ENST00000458516 GTF2IP78347 998 aa20.57■□□□□ 0.88
TRIM39-211ENST00000458516 CHAF1AQ13111 956 aaPredicted RBP20.57■□□□□ 0.88
TRIM39-211ENST00000458516 OSBPL3Q9H4L5 887 aa20.57■□□□□ 0.88
TRIM39-211ENST00000458516 JAG2Q9Y219 1238 aa20.57■□□□□ 0.88
TRIM39-211ENST00000458516 ZC3H4Q9UPT8 1303 aaKnown RBP20.56■□□□□ 0.88
TRIM39-211ENST00000458516 RAD17O75943 681 aa20.56■□□□□ 0.88
TRIM39-211ENST00000458516 CXCL9Q07325 125 aa20.56■□□□□ 0.88
TRIM39-211ENST00000458516 STRIP1Q5VSL9 837 aa20.56■□□□□ 0.88
TRIM39-211ENST00000458516 SPATA5Q8NB90 893 aa20.56■□□□□ 0.88
TRIM39-211ENST00000458516 BOLA2Q9H3K6 86 aa20.56■□□□□ 0.88
TRIM39-211ENST00000458516 SNRKQ9NRH2 765 aa20.56■□□□□ 0.88
TRIM39-211ENST00000458516 NDUFB9Q9Y6M9 179 aa20.56■□□□□ 0.88
TRIM39-211ENST00000458516 MAST2Q6P0Q8 1798 aa20.56■□□□□ 0.88
TRIM39-211ENST00000458516 USP17L3A6NCW0 530 aa20.55■□□□□ 0.88
TRIM39-211ENST00000458516 USP17L4A6NCW7 530 aa20.55■□□□□ 0.88
TRIM39-211ENST00000458516 PSMD14O00487 310 aa20.55■□□□□ 0.88
TRIM39-211ENST00000458516 ERC2O15083 957 aa20.55■□□□□ 0.88
TRIM39-211ENST00000458516 ZAP70P43403 619 aa20.55■□□□□ 0.88
TRIM39-211ENST00000458516 EIF6P56537 245 aaKnown RBP20.55■□□□□ 0.88
TRIM39-211ENST00000458516 DACT2Q5SW24 774 aa20.55■□□□□ 0.88
TRIM39-211ENST00000458516 TTLL5Q6EMB2 1281 aa20.55■□□□□ 0.88
TRIM39-211ENST00000458516 CIAPIN1Q6FI81 312 aa20.55■□□□□ 0.88
TRIM39-211ENST00000458516 USP17L1Q7RTZ2 530 aa20.55■□□□□ 0.88
TRIM39-211ENST00000458516 FBXW7Q969H0 707 aa20.55■□□□□ 0.88
TRIM39-211ENST00000458516 GLRX3O76003 335 aaKnown RBP20.54■□□□□ 0.88
TRIM39-211ENST00000458516 VIL1P09327 827 aaKnown RBP20.54■□□□□ 0.88
TRIM39-211ENST00000458516 HAUS7Q99871 368 aa20.54■□□□□ 0.88
TRIM39-211ENST00000458516 SALL1Q9NSC2 1324 aa20.53■□□□□ 0.88
TRIM39-211ENST00000458516 CERS5Q8N5B7 392 aa20.53■□□□□ 0.88
TRIM39-211ENST00000458516 WDR66Q8TBY9 1149 aa20.53■□□□□ 0.88
TRIM39-211ENST00000458516 MXD3Q9BW11 206 aa20.53■□□□□ 0.88
TRIM39-211ENST00000458516 CYP2E1P05181 493 aaPredicted RBP20.52■□□□□ 0.88
TRIM39-211ENST00000458516 FKBP1AP62942 108 aaKnown RBP20.52■□□□□ 0.88
TRIM39-211ENST00000458516 TNIP1Q15025 636 aa20.52■□□□□ 0.88
TRIM39-211ENST00000458516 TBC1D22AQ8WUA7 517 aa20.52■□□□□ 0.88
TRIM39-211ENST00000458516 EDC3Q96F86 508 aaKnown RBP20.52■□□□□ 0.88
TRIM39-211ENST00000458516 DNAJC2Q99543 621 aaKnown RBP20.52■□□□□ 0.88
TRIM39-211ENST00000458516 MYH2Q9UKX2 1941 aa20.51■□□□□ 0.87
TRIM39-211ENST00000458516 RGS3P49796 1198 aa20.51■□□□□ 0.87
TRIM39-211ENST00000458516 MFSD14BQ5SR56 506 aa20.51■□□□□ 0.87
TRIM39-211ENST00000458516 RSBN1LQ6PCB5 846 aaPredicted RBP20.51■□□□□ 0.87
TRIM39-211ENST00000458516 ANTXR1Q9H6X2 564 aa20.51■□□□□ 0.87
TRIM39-211ENST00000458516 ADAMTSL1Q8N6G6 1762 aa20.51■□□□□ 0.87
TRIM39-211ENST00000458516 GRIK5Q16478 980 aa20.5■□□□□ 0.87
TRIM39-211ENST00000458516 TBC1D9Q6ZT07 1266 aa20.5■□□□□ 0.87
TRIM39-211ENST00000458516 GPC2Q8N158 579 aa20.5■□□□□ 0.87
TRIM39-211ENST00000458516 PIH1D3Q9NQM4 214 aaKnown RBP20.5■□□□□ 0.87
TRIM39-211ENST00000458516 PAG1Q9NWQ8 432 aa20.5■□□□□ 0.87
TRIM39-211ENST00000458516 WDR90Q96KV7 1748 aa20.5■□□□□ 0.87
TRIM39-211ENST00000458516 GOLIM4O00461 696 aa20.49■□□□□ 0.87
TRIM39-211ENST00000458516 TTC22Q5TAA0 569 aa20.49■□□□□ 0.87
TRIM39-211ENST00000458516 GMLQ99445 158 aa20.49■□□□□ 0.87
TRIM39-211ENST00000458516 ZBTB12Q9Y330 459 aaPredicted RBP20.49■□□□□ 0.87
TRIM39-211ENST00000458516 GJA3Q9Y6H8 435 aa20.49■□□□□ 0.87
TRIM39-211ENST00000458516 MYO3BQ8WXR4 1341 aa20.49■□□□□ 0.87
TRIM39-211ENST00000458516 DDNO94850 711 aaPredicted RBP20.48■□□□□ 0.87
TRIM39-211ENST00000458516 MAP4K4O95819 1239 aaPredicted RBP20.48■□□□□ 0.87
TRIM39-211ENST00000458516 GSPT1P15170 499 aaKnown RBP20.48■□□□□ 0.87
TRIM39-211ENST00000458516 PRDX5P30044 214 aa20.48■□□□□ 0.87
TRIM39-211ENST00000458516 ZGPATQ8N5A5 531 aaKnown RBP20.48■□□□□ 0.87
TRIM39-211ENST00000458516 AGBL3Q8NEM8 1001 aa20.48■□□□□ 0.87
TRIM39-211ENST00000458516 ABCF2Q9UG63 623 aa20.48■□□□□ 0.87
TRIM39-211ENST00000458516 SCN4AP35499 1836 aa20.48■□□□□ 0.87
TRIM39-211ENST00000458516 GLTPD2A6NH11 291 aa20.47■□□□□ 0.87
TRIM39-211ENST00000458516 GMPSP49915 693 aaPredicted RBP20.47■□□□□ 0.87
TRIM39-211ENST00000458516 TTF1Q15361 905 aaPredicted RBP20.47■□□□□ 0.87
TRIM39-211ENST00000458516 SUGT1Q9Y2Z0 365 aa20.47■□□□□ 0.87
TRIM39-211ENST00000458516 RPS12P25398 132 aaKnown RBP20.46■□□□□ 0.87
TRIM39-211ENST00000458516 LDHBP07195 334 aaKnown RBP20.45■□□□□ 0.86
TRIM39-211ENST00000458516 SPTY2D1Q68D10 685 aaPredicted RBP20.45■□□□□ 0.86
TRIM39-211ENST00000458516 DPY19L2Q6NUT2 758 aa20.45■□□□□ 0.86
TRIM39-211ENST00000458516 ERICH6Q7L0X2 663 aa20.45■□□□□ 0.86
TRIM39-211ENST00000458516 KIAA0825Q8IV33 1275 aa20.45■□□□□ 0.86
TRIM39-211ENST00000458516 ECM29Q5VYK3 1845 aa20.45■□□□□ 0.86
TRIM39-211ENST00000458516 F8W031 263 aaPredicted RBP20.44■□□□□ 0.86
TRIM39-211ENST00000458516 SCNN1DP51172 638 aa20.44■□□□□ 0.86
TRIM39-211ENST00000458516 KBTBD3Q8NAB2 608 aa20.44■□□□□ 0.86
TRIM39-211ENST00000458516 ZNF384Q8TF68 577 aa20.44■□□□□ 0.86
TRIM39-211ENST00000458516 DPF2Q92785 391 aa20.44■□□□□ 0.86
TRIM39-211ENST00000458516 EVI5LQ96CN4 794 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms