RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 ANKRD31Q8N7Z5 1873 aa10.77□□□□□ -0.69
CDC42EP3-204ENST00000457889 SRGNP10124 158 aa10.77□□□□□ -0.69
CDC42EP3-204ENST00000457889 ADORA1P30542 326 aa10.77□□□□□ -0.69
CDC42EP3-204ENST00000457889 KCNJ4P48050 445 aa10.77□□□□□ -0.69
CDC42EP3-204ENST00000457889 CCDC102BQ68D86 513 aa10.77□□□□□ -0.69
CDC42EP3-204ENST00000457889 STYK1Q6J9G0 422 aa10.77□□□□□ -0.69
CDC42EP3-204ENST00000457889 ZSCAN25Q6NSZ9 544 aa10.77□□□□□ -0.69
CDC42EP3-204ENST00000457889 KIAA1211Q6ZU35 1233 aa10.77□□□□□ -0.69
CDC42EP3-204ENST00000457889 KLHL34Q8N239 644 aa10.77□□□□□ -0.69
CDC42EP3-204ENST00000457889 MASTLQ96GX5 879 aa10.77□□□□□ -0.69
CDC42EP3-204ENST00000457889 DNAJC2Q99543 621 aaKnown RBP10.77□□□□□ -0.69
CDC42EP3-204ENST00000457889 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.77□□□□□ -0.69
CDC42EP3-204ENST00000457889 PODXL2Q9NZ53 605 aa10.77□□□□□ -0.69
CDC42EP3-204ENST00000457889 LRRC37AA6NMS7 1700 aa10.77□□□□□ -0.69
CDC42EP3-204ENST00000457889 C10orf71Q711Q0 1435 aa10.76□□□□□ -0.69
CDC42EP3-204ENST00000457889 ANAPC15P60006 121 aa10.76□□□□□ -0.69
CDC42EP3-204ENST00000457889 TMX4Q9H1E5 349 aaPredicted RBP10.76□□□□□ -0.69
CDC42EP3-204ENST00000457889 DUOX1Q9NRD9 1551 aa10.76□□□□□ -0.69
CDC42EP3-204ENST00000457889 GOLIM4O00461 696 aa10.75□□□□□ -0.69
CDC42EP3-204ENST00000457889 TAF5LO75529 589 aa10.75□□□□□ -0.69
CDC42EP3-204ENST00000457889 MAP4K4O95819 1239 aaPredicted RBP10.75□□□□□ -0.69
CDC42EP3-204ENST00000457889 ATP2B4P23634 1241 aa10.75□□□□□ -0.69
CDC42EP3-204ENST00000457889 GRIPAP1Q4V328 841 aa10.75□□□□□ -0.69
CDC42EP3-204ENST00000457889 MSL1Q68DK7 614 aa10.75□□□□□ -0.69
CDC42EP3-204ENST00000457889 VPS37DQ86XT2 251 aa10.75□□□□□ -0.69
CDC42EP3-204ENST00000457889 SP8Q8IXZ3 490 aa10.75□□□□□ -0.69
CDC42EP3-204ENST00000457889 CCDC24Q8N4L8 307 aa10.75□□□□□ -0.69
CDC42EP3-204ENST00000457889 HELBQ8NG08 1087 aaPredicted RBP10.75□□□□□ -0.69
CDC42EP3-204ENST00000457889 USP26Q9BXU7 913 aa10.75□□□□□ -0.69
CDC42EP3-204ENST00000457889 HELLSQ9NRZ9 838 aa10.75□□□□□ -0.69
CDC42EP3-204ENST00000457889 ANKIB1Q9P2G1 1089 aa10.75□□□□□ -0.69
CDC42EP3-204ENST00000457889 COL4A1P02462 1669 aa10.75□□□□□ -0.69
CDC42EP3-204ENST00000457889 MED23Q9ULK4 1368 aa10.75□□□□□ -0.69
CDC42EP3-204ENST00000457889 AKAP11Q9UKA4 1901 aa10.74□□□□□ -0.69
CDC42EP3-204ENST00000457889 H0YIN7 160 aa10.74□□□□□ -0.69
CDC42EP3-204ENST00000457889 PPEF1O14829 653 aaPredicted RBP10.74□□□□□ -0.69
CDC42EP3-204ENST00000457889 MCAMP43121 646 aa10.74□□□□□ -0.69
CDC42EP3-204ENST00000457889 PHKA1P46020 1223 aa10.74□□□□□ -0.69
CDC42EP3-204ENST00000457889 VASPP50552 380 aaPredicted RBP10.74□□□□□ -0.69
CDC42EP3-204ENST00000457889 FKBP4Q02790 459 aaKnown RBP eCLIP10.74□□□□□ -0.69
CDC42EP3-204ENST00000457889 RASGRF1Q13972 1273 aa10.74□□□□□ -0.69
CDC42EP3-204ENST00000457889 CC2D2BQ6DHV5 1058 aa10.74□□□□□ -0.69
CDC42EP3-204ENST00000457889 CWC27Q6UX04 472 aaKnown RBP10.74□□□□□ -0.69
CDC42EP3-204ENST00000457889 FBXO33Q7Z6M2 555 aa10.74□□□□□ -0.69
CDC42EP3-204ENST00000457889 SPATA5Q8NB90 893 aa10.74□□□□□ -0.69
CDC42EP3-204ENST00000457889 CNKSR1Q969H4 720 aa10.74□□□□□ -0.69
CDC42EP3-204ENST00000457889 IL17RAQ96F46 866 aa10.74□□□□□ -0.69
CDC42EP3-204ENST00000457889 ANO2Q9NQ90 1003 aa10.74□□□□□ -0.69
CDC42EP3-204ENST00000457889 DENND2AQ9ULE3 1009 aa10.74□□□□□ -0.69
CDC42EP3-204ENST00000457889 ATP6V0A2Q9Y487 856 aa10.74□□□□□ -0.69
CDC42EP3-204ENST00000457889 RNF113AO15541 343 aaKnown RBP10.73□□□□□ -0.69
CDC42EP3-204ENST00000457889 ZAP70P43403 619 aa10.73□□□□□ -0.69
CDC42EP3-204ENST00000457889 BECN1Q14457 450 aa10.73□□□□□ -0.69
CDC42EP3-204ENST00000457889 RABEP1Q15276 862 aa10.73□□□□□ -0.69
CDC42EP3-204ENST00000457889 MCMDC2Q4G0Z9 681 aa10.73□□□□□ -0.69
CDC42EP3-204ENST00000457889 ZNF804AQ7Z570 1209 aa10.73□□□□□ -0.69
CDC42EP3-204ENST00000457889 UPF1Q92900 1129 aaKnown RBP eCLIP10.73□□□□□ -0.69
CDC42EP3-204ENST00000457889 IPO9Q96P70 1041 aaKnown RBP10.73□□□□□ -0.69
CDC42EP3-204ENST00000457889 MTFR1LQ9H019 292 aa10.73□□□□□ -0.69
CDC42EP3-204ENST00000457889 HMG20BQ9P0W2 317 aa10.73□□□□□ -0.69
CDC42EP3-204ENST00000457889 GGA1Q9UJY5 639 aa10.73□□□□□ -0.69
CDC42EP3-204ENST00000457889 COL11A2P13942 1736 aaPredicted RBP10.72□□□□□ -0.69
CDC42EP3-204ENST00000457889 TAF1P21675 1872 aa10.72□□□□□ -0.69
CDC42EP3-204ENST00000457889 POLD1P28340 1107 aa10.72□□□□□ -0.69
CDC42EP3-204ENST00000457889 HIBADHP31937 336 aaKnown RBP10.72□□□□□ -0.69
CDC42EP3-204ENST00000457889 MAP3K12Q12852 859 aa10.72□□□□□ -0.69
CDC42EP3-204ENST00000457889 NMIQ13287 307 aaPredicted RBP10.72□□□□□ -0.69
CDC42EP3-204ENST00000457889 UBE3CQ15386 1083 aa10.72□□□□□ -0.69
CDC42EP3-204ENST00000457889 ZMYM1Q5SVZ6 1142 aa10.72□□□□□ -0.69
CDC42EP3-204ENST00000457889 C2CD5Q86YS7 1000 aa10.72□□□□□ -0.69
CDC42EP3-204ENST00000457889 ZGPATQ8N5A5 531 aaKnown RBP10.72□□□□□ -0.69
CDC42EP3-204ENST00000457889 APPBP2Q92624 585 aa10.72□□□□□ -0.69
CDC42EP3-204ENST00000457889 FAM84BQ96KN1 310 aaPredicted RBP10.72□□□□□ -0.69
CDC42EP3-204ENST00000457889 LSG1Q9H089 658 aaKnown RBP10.72□□□□□ -0.69
CDC42EP3-204ENST00000457889 CCDC171Q6TFL3 1326 aa10.72□□□□□ -0.69
CDC42EP3-204ENST00000457889 IRS2Q9Y4H2 1338 aa10.72□□□□□ -0.69
CDC42EP3-204ENST00000457889 LTBP1Q14766 1721 aa10.72□□□□□ -0.69
CDC42EP3-204ENST00000457889 A0A0D9SFI3 127 aa10.71□□□□□ -0.69
CDC42EP3-204ENST00000457889 UFL1O94874 794 aa10.71□□□□□ -0.69
CDC42EP3-204ENST00000457889 CYP2E1P05181 493 aaPredicted RBP10.71□□□□□ -0.69
CDC42EP3-204ENST00000457889 MYH7P12883 1935 aa10.71□□□□□ -0.69
CDC42EP3-204ENST00000457889 HSPA4P34932 840 aa10.71□□□□□ -0.69
CDC42EP3-204ENST00000457889 BCAMP50895 628 aa10.71□□□□□ -0.69
CDC42EP3-204ENST00000457889 SCARF1Q14162 830 aa10.71□□□□□ -0.69
CDC42EP3-204ENST00000457889 WASHC4Q2M389 1173 aa10.71□□□□□ -0.69
CDC42EP3-204ENST00000457889 RNF20Q5VTR2 975 aa10.71□□□□□ -0.69
CDC42EP3-204ENST00000457889 DOCK2Q92608 1830 aa10.71□□□□□ -0.69
CDC42EP3-204ENST00000457889 KIF13BQ9NQT8 1826 aa10.71□□□□□ -0.69
CDC42EP3-204ENST00000457889 SALL1Q9NSC2 1324 aa10.71□□□□□ -0.69
CDC42EP3-204ENST00000457889 DLEC1Q9Y238 1755 aa10.71□□□□□ -0.69
CDC42EP3-204ENST00000457889 ADD2P35612 726 aa10.7□□□□□ -0.7
CDC42EP3-204ENST00000457889 GYG1P46976 350 aa10.7□□□□□ -0.7
CDC42EP3-204ENST00000457889 GPSM2P81274 684 aa10.7□□□□□ -0.7
CDC42EP3-204ENST00000457889 SPTY2D1Q68D10 685 aaPredicted RBP10.7□□□□□ -0.7
CDC42EP3-204ENST00000457889 PDCD7Q8N8D1 485 aaKnown RBP10.7□□□□□ -0.7
CDC42EP3-204ENST00000457889 WDR66Q8TBY9 1149 aa10.7□□□□□ -0.7
CDC42EP3-204ENST00000457889 MAP4K1Q92918 833 aa10.7□□□□□ -0.7
CDC42EP3-204ENST00000457889 EDC3Q96F86 508 aaKnown RBP10.7□□□□□ -0.7
CDC42EP3-204ENST00000457889 FAM227BQ96M60 508 aa10.7□□□□□ -0.7
CDC42EP3-204ENST00000457889 EYA3Q99504 573 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms