RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 MAP4K4O95819 1239 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P30-201ENST00000457863 RPLP1P05386 114 aaKnown RBP5.36□□□□□ -1.55
HMGB3P30-201ENST00000457863 SCNN1AP37088 669 aa5.36□□□□□ -1.55
HMGB3P30-201ENST00000457863 TTC39BQ5VTQ0 682 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P30-201ENST00000457863 EGFLAMQ63HQ2 1017 aa5.36□□□□□ -1.55
HMGB3P30-201ENST00000457863 NPAS4Q8IUM7 802 aa5.36□□□□□ -1.55
HMGB3P30-201ENST00000457863 SMC5Q8IY18 1101 aa5.36□□□□□ -1.55
HMGB3P30-201ENST00000457863 GPATCH3Q96I76 525 aa5.36□□□□□ -1.55
HMGB3P30-201ENST00000457863 RASSF4Q9H2L5 321 aa5.36□□□□□ -1.55
HMGB3P30-201ENST00000457863 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.36□□□□□ -1.55
HMGB3P30-201ENST00000457863 TMA7Q9Y2S6 64 aaKnown RBP5.36□□□□□ -1.55
HMGB3P30-201ENST00000457863 ALX3O95076 343 aa5.35□□□□□ -1.55
HMGB3P30-201ENST00000457863 FSTP19883 344 aa5.35□□□□□ -1.55
HMGB3P30-201ENST00000457863 PTMSP20962 102 aa5.35□□□□□ -1.55
HMGB3P30-201ENST00000457863 CDC27P30260 824 aa5.35□□□□□ -1.55
HMGB3P30-201ENST00000457863 ZEB1P37275 1124 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P30-201ENST00000457863 IGBP1P78318 339 aa5.35□□□□□ -1.55
HMGB3P30-201ENST00000457863 RALBP1Q15311 655 aa5.35□□□□□ -1.55
HMGB3P30-201ENST00000457863 UVSSAQ2YD98 709 aa5.35□□□□□ -1.55
HMGB3P30-201ENST00000457863 CEP135Q66GS9 1140 aa5.35□□□□□ -1.55
HMGB3P30-201ENST00000457863 NBPF11Q86T75 865 aa5.35□□□□□ -1.55
HMGB3P30-201ENST00000457863 GPATCH11Q8N954 259 aa5.35□□□□□ -1.55
HMGB3P30-201ENST00000457863 CEP120Q8N960 986 aa5.35□□□□□ -1.55
HMGB3P30-201ENST00000457863 GALNT11Q8NCW6 608 aa5.35□□□□□ -1.55
HMGB3P30-201ENST00000457863 PBX4Q9BYU1 374 aa5.35□□□□□ -1.55
HMGB3P30-201ENST00000457863 LNPKQ9C0E8 428 aa5.35□□□□□ -1.55
HMGB3P30-201ENST00000457863 UBA5Q9GZZ9 404 aa5.35□□□□□ -1.55
HMGB3P30-201ENST00000457863 ELP3Q9H9T3 547 aa5.35□□□□□ -1.55
HMGB3P30-201ENST00000457863 TERF2IPQ9NYB0 399 aa5.35□□□□□ -1.55
HMGB3P30-201ENST00000457863 SEPT3Q9UH03 358 aa5.35□□□□□ -1.55
HMGB3P30-201ENST00000457863 LAS1LQ9Y4W2 734 aaKnown RBP5.35□□□□□ -1.55
HMGB3P30-201ENST00000457863 HMGB1P1B2RPK0 211 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P30-201ENST00000457863 GSC2O15499 205 aa5.34□□□□□ -1.55
HMGB3P30-201ENST00000457863 CYP2E1P05181 493 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P30-201ENST00000457863 GLB1P16278 677 aa5.34□□□□□ -1.55
HMGB3P30-201ENST00000457863 CD68P34810 354 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P30-201ENST00000457863 FAM50AQ14320 339 aaKnown RBP5.34□□□□□ -1.55
HMGB3P30-201ENST00000457863 XKR5Q6UX68 686 aa5.34□□□□□ -1.55
HMGB3P30-201ENST00000457863 ADAMTSL4Q6UY14 1074 aa5.34□□□□□ -1.55
HMGB3P30-201ENST00000457863 ZNF438Q7Z4V0 828 aa5.34□□□□□ -1.55
HMGB3P30-201ENST00000457863 KLHL23Q8NBE8 558 aa5.34□□□□□ -1.55
HMGB3P30-201ENST00000457863 NUDT16Q96DE0 195 aaKnown RBP5.34□□□□□ -1.55
HMGB3P30-201ENST00000457863 SGSM3Q96HU1 749 aa5.34□□□□□ -1.55
HMGB3P30-201ENST00000457863 ADAM19Q9H013 955 aa5.34□□□□□ -1.55
HMGB3P30-201ENST00000457863 TMEM63CQ9P1W3 806 aa5.34□□□□□ -1.55
HMGB3P30-201ENST00000457863 LINC01387J3KSC0 135 aa5.33□□□□□ -1.56
HMGB3P30-201ENST00000457863 FSCN2O14926 492 aa5.33□□□□□ -1.56
HMGB3P30-201ENST00000457863 PEX14O75381 377 aa5.33□□□□□ -1.56
HMGB3P30-201ENST00000457863 WISP1O95388 367 aa5.33□□□□□ -1.56
HMGB3P30-201ENST00000457863 PARNO95453 639 aaKnown RBP5.33□□□□□ -1.56
HMGB3P30-201ENST00000457863 RECKO95980 971 aa5.33□□□□□ -1.56
HMGB3P30-201ENST00000457863 PTPRAP18433 802 aa5.33□□□□□ -1.56
HMGB3P30-201ENST00000457863 EPHA1P21709 976 aa5.33□□□□□ -1.56
HMGB3P30-201ENST00000457863 PTPROQ16827 1216 aa5.33□□□□□ -1.56
HMGB3P30-201ENST00000457863 PHLDB3Q6NSJ2 640 aa5.33□□□□□ -1.56
HMGB3P30-201ENST00000457863 FAM117BQ6P1L5 589 aa5.33□□□□□ -1.56
HMGB3P30-201ENST00000457863 APBB1IPQ7Z5R6 666 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P30-201ENST00000457863 NCAPG2Q86XI2 1143 aa5.33□□□□□ -1.56
HMGB3P30-201ENST00000457863 AGGF1Q8N302 714 aaeCLIP5.33□□□□□ -1.56
HMGB3P30-201ENST00000457863 TMTC2Q8N394 836 aa5.33□□□□□ -1.56
HMGB3P30-201ENST00000457863 WNT8BQ93098 351 aa5.33□□□□□ -1.56
HMGB3P30-201ENST00000457863 CEP41Q9BYV8 373 aa5.33□□□□□ -1.56
HMGB3P30-201ENST00000457863 LACRTQ9GZZ8 138 aa5.33□□□□□ -1.56
HMGB3P30-201ENST00000457863 KLHL42Q9P2K6 505 aa5.33□□□□□ -1.56
HMGB3P30-201ENST00000457863 ANKRD33BA6NCL7 494 aa5.32□□□□□ -1.56
HMGB3P30-201ENST00000457863 H3BRJ5 948 aa5.32□□□□□ -1.56
HMGB3P30-201ENST00000457863 ERCC5P28715 1186 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P30-201ENST00000457863 PIP4K2BP78356 416 aa5.32□□□□□ -1.56
HMGB3P30-201ENST00000457863 TXNDC11Q6PKC3 985 aa5.32□□□□□ -1.56
HMGB3P30-201ENST00000457863 ACAD11Q709F0 780 aa5.32□□□□□ -1.56
HMGB3P30-201ENST00000457863 ATCAYQ86WG3 371 aa5.32□□□□□ -1.56
HMGB3P30-201ENST00000457863 NME8Q8N427 588 aa5.32□□□□□ -1.56
HMGB3P30-201ENST00000457863 KCNB2Q92953 911 aa5.32□□□□□ -1.56
HMGB3P30-201ENST00000457863 UBL7Q96S82 380 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P30-201ENST00000457863 DNAJC2Q99543 621 aaKnown RBP5.32□□□□□ -1.56
HMGB3P30-201ENST00000457863 KRTAP9-2Q9BYQ4 174 aa5.32□□□□□ -1.56
HMGB3P30-201ENST00000457863 KCNK4Q9NYG8 393 aa5.32□□□□□ -1.56
HMGB3P30-201ENST00000457863 SALL4Q9UJQ4 1053 aa5.32□□□□□ -1.56
HMGB3P30-201ENST00000457863 RAXQ9Y2V3 346 aa5.32□□□□□ -1.56
HMGB3P30-201ENST00000457863 hCG_2014768A0A024R1R8 64 aa5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 SOWAHDA6NJG2 315 aa5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 NFKBIEO00221 500 aa5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 DHX15O43143 795 aaKnown RBP5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 ADAM11O75078 769 aa5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 EIF3JO75822 258 aaKnown RBP5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 PDGFAP04085 211 aa5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 PCSK2P16519 638 aa5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 MZF1P28698 734 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 CD97P48960 835 aa5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 SDE2Q6IQ49 451 aa5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 KIAA1211Q6ZU35 1233 aa5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 CNPY4Q8N129 248 aa5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 ARMC10Q8N2F6 343 aa5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 EDEM1Q92611 657 aa5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 FAM46AQ96IP4 442 aaKnown RBP5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 POP1Q99575 1024 aaKnown RBP5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 CARD10Q9BWT7 1032 aa5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 BRINP2Q9C0B6 783 aa5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 OSGEPQ9NPF4 335 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms