RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 AATKQ6ZMQ8 1374 aa11.19□□□□□ -0.62
MSC-AS1-201ENST00000457356 RIOK3O14730 519 aaKnown RBP11.19□□□□□ -0.62
MSC-AS1-201ENST00000457356 TYRO3Q06418 890 aa11.19□□□□□ -0.62
MSC-AS1-201ENST00000457356 ATP2B3Q16720 1220 aa11.19□□□□□ -0.62
MSC-AS1-201ENST00000457356 TXNRD1Q16881 649 aa11.19□□□□□ -0.62
MSC-AS1-201ENST00000457356 DEFB132Q7Z7B7 95 aa11.19□□□□□ -0.62
MSC-AS1-201ENST00000457356 BRF1Q92994 677 aa11.19□□□□□ -0.62
MSC-AS1-201ENST00000457356 JADE2Q9NQC1 790 aa11.19□□□□□ -0.62
MSC-AS1-201ENST00000457356 FRMPD1Q5SYB0 1578 aa11.19□□□□□ -0.62
MSC-AS1-201ENST00000457356 IL16Q14005 1332 aa11.19□□□□□ -0.62
MSC-AS1-201ENST00000457356 PARD3Q8TEW0 1356 aa11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 KCNQ2O43526 872 aa11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 PDE1AP54750 535 aa11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 USPL1Q5W0Q7 1092 aa11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 PTPRUQ92729 1446 aa11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 ECHDC1Q9NTX5 307 aa11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 USP16Q9Y5T5 823 aa11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 CRKLP46109 303 aaKnown RBP11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 HAND2P61296 217 aa11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 CACNA2D4Q7Z3S7 1137 aa11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 AOPEPQ8N6M6 819 aa11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 IL17REQ8NFR9 667 aa11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 RBM17Q96I25 401 aaKnown RBP11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 ORC3Q9UBD5 711 aaPredicted RBP11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 RTL1A6NKG5 1358 aa11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 F8W031 263 aaPredicted RBP11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 MYO1BO43795 1136 aa11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 CAVIN2O95810 425 aa11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 ZNF397Q8NF99 534 aaPredicted RBP11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 ZNF526Q8TF50 670 aaPredicted RBP11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 FEZ1Q99689 392 aa11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 OGFRQ9NZT2 677 aa11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 PTPRCP08575 1304 aa11.18□□□□□ -0.62
MSC-AS1-201ENST00000457356 TDRD12Q587J7 1177 aaKnown RBP11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 CCDC144CPQ8IYA2 1237 aa11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 LINS1Q8NG48 757 aa11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 PIGBQ92521 554 aa11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 EYA3Q99504 573 aa11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 IQSEC3Q9UPP2 1182 aaPredicted RBP11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 PREX1Q8TCU6 1659 aa11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 CWF19L2Q2TBE0 894 aaKnown RBP11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 LARGE2Q8N3Y3 721 aa11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 INCENPQ9NQS7 918 aa11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 BMP2KQ9NSY1 1161 aaPredicted RBP11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 MINDY4BA8MYZ0 360 aa11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 SYT1P21579 422 aa11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 CRACR2BQ8N4Y2 399 aaPredicted RBP11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 F13A1P00488 732 aa11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 DNAJC21Q5F1R6 531 aaKnown RBP11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 UTP14CQ5TAP6 766 aaKnown RBP11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 CCDC102BQ68D86 513 aa11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 ATRIPQ8WXE1 791 aa11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 PHAXQ9H814 394 aaKnown RBP11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 GOPCQ9HD26 462 aa11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 HDAC9Q9UKV0 1011 aa11.17□□□□□ -0.62
MSC-AS1-201ENST00000457356 CPS1P31327 1500 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 TULP4Q9NRJ4 1543 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 GOLGA8BA8MQT2 603 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 GRM8O00222 908 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 N4BP3O15049 544 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 KCNQ3O43525 872 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 YEATS4O95619 227 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 CCDC175P0C221 793 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 FAM173BQ6P4H8 233 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 TSPYL6Q8N831 410 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 SPON1Q9HCB6 807 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 SNRKQ9NRH2 765 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 USP19O94966 1318 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 PALLDQ8WX93 1383 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 NPC1L1Q9UHC9 1359 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 NCOA3Q9Y6Q9 1424 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 KIF13AQ9H1H9 1805 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 MAATS1Q7Z4T9 603 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 NEK1Q96PY6 1258 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 ESYT1Q9BSJ8 1104 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 BCL2L12Q9HB09 334 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 VPS18Q9P253 973 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 ZBTB1Q9Y2K1 713 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 IGSF1Q8N6C5 1336 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 MCM3P25205 808 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 PDE6BP35913 854 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 CCDC178Q5BJE1 867 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 SOGA3Q5TF21 947 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 ZSCAN25Q6NSZ9 544 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 CEP57Q86XR8 500 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 CCDC150Q8NCX0 1101 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 HELBQ8NG08 1087 aaPredicted RBP11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 AIDAQ96BJ3 306 aa11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 PUF60Q9UHX1 559 aaKnown RBP11.16□□□□□ -0.62
MSC-AS1-201ENST00000457356 CRB1P82279 1406 aa11.15□□□□□ -0.62
MSC-AS1-201ENST00000457356 USO1O60763 962 aaKnown RBP11.15□□□□□ -0.62
MSC-AS1-201ENST00000457356 MICALCLQ6ZW33 695 aa11.15□□□□□ -0.62
MSC-AS1-201ENST00000457356 C2CD5Q86YS7 1000 aa11.15□□□□□ -0.62
MSC-AS1-201ENST00000457356 TMEM51Q9NW97 253 aa11.15□□□□□ -0.62
MSC-AS1-201ENST00000457356 SPATA31A1Q5TZJ5 1347 aa11.15□□□□□ -0.62
MSC-AS1-201ENST00000457356 GOLGA6L9A6NEM1 432 aa11.15□□□□□ -0.62
MSC-AS1-201ENST00000457356 CYP27B1O15528 508 aa11.15□□□□□ -0.62
MSC-AS1-201ENST00000457356 USP5P45974 858 aa11.15□□□□□ -0.62
MSC-AS1-201ENST00000457356 MYRIPQ8NFW9 859 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms