RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 TRMT112Q9UI30 125 aaKnown RBP21.62■■□□□ 1.05
SEMA3B-209ENST00000456560 PDE8AO60658 829 aa21.61■■□□□ 1.05
SEMA3B-209ENST00000456560 IMMTQ16891 758 aaKnown RBP21.61■■□□□ 1.05
SEMA3B-209ENST00000456560 ZNF34Q8IZ26 560 aa21.61■■□□□ 1.05
SEMA3B-209ENST00000456560 CLSTN2Q9H4D0 955 aa21.61■■□□□ 1.05
SEMA3B-209ENST00000456560 NCOA5Q9HCD5 579 aaKnown RBP21.61■■□□□ 1.05
SEMA3B-209ENST00000456560 CFAP45Q9UL16 551 aa21.61■■□□□ 1.05
SEMA3B-209ENST00000456560 KIF3AQ9Y496 699 aa21.61■■□□□ 1.05
SEMA3B-209ENST00000456560 MYH15Q9Y2K3 1946 aa21.61■■□□□ 1.05
SEMA3B-209ENST00000456560 SPATA31A6Q5VVP1 1343 aa21.6■■□□□ 1.05
SEMA3B-209ENST00000456560 MB21D2Q8IYB1 491 aaPredicted RBP21.6■■□□□ 1.05
SEMA3B-209ENST00000456560 CNNM1Q9NRU3 951 aa21.6■■□□□ 1.05
SEMA3B-209ENST00000456560 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.6■■□□□ 1.05
SEMA3B-209ENST00000456560 WNK3Q9BYP7 1800 aa21.6■■□□□ 1.05
SEMA3B-209ENST00000456560 CAMK4Q16566 473 aa21.6■■□□□ 1.05
SEMA3B-209ENST00000456560 DZIP3Q86Y13 1208 aaKnown RBP21.6■■□□□ 1.05
SEMA3B-209ENST00000456560 MRVI1Q9Y6F6 885 aa21.6■■□□□ 1.05
SEMA3B-209ENST00000456560 UBN2Q6ZU65 1347 aa21.59■■□□□ 1.05
SEMA3B-209ENST00000456560 SLIT2O94813 1529 aa21.59■■□□□ 1.05
SEMA3B-209ENST00000456560 AP5Z1O43299 807 aa21.59■■□□□ 1.05
SEMA3B-209ENST00000456560 PDE8BO95263 885 aa21.59■■□□□ 1.05
SEMA3B-209ENST00000456560 HAND2P61296 217 aa21.59■■□□□ 1.05
SEMA3B-209ENST00000456560 TYRO3Q06418 890 aa21.59■■□□□ 1.05
SEMA3B-209ENST00000456560 TNMDQ9H2S6 317 aa21.59■■□□□ 1.05
SEMA3B-209ENST00000456560 GPHNQ9NQX3 736 aaPredicted RBP21.59■■□□□ 1.05
SEMA3B-209ENST00000456560 RCOR1Q9UKL0 485 aa21.59■■□□□ 1.05
SEMA3B-209ENST00000456560 TBC1D2BQ9UPU7 963 aa21.59■■□□□ 1.05
SEMA3B-209ENST00000456560 UQCRHLA0A096LP55 91 aa21.59■■□□□ 1.05
SEMA3B-209ENST00000456560 GPAA1O43292 621 aa21.59■■□□□ 1.05
SEMA3B-209ENST00000456560 UQCRHP07919 91 aa21.59■■□□□ 1.05
SEMA3B-209ENST00000456560 ADD2P35612 726 aa21.59■■□□□ 1.05
SEMA3B-209ENST00000456560 MEX3CQ5U5Q3 659 aaKnown RBP21.59■■□□□ 1.05
SEMA3B-209ENST00000456560 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.59■■□□□ 1.05
SEMA3B-209ENST00000456560 NRAPQ86VF7 1730 aa21.58■■□□□ 1.05
SEMA3B-209ENST00000456560 FDPSP14324 419 aaKnown RBP21.58■■□□□ 1.05
SEMA3B-209ENST00000456560 ZSCAN25Q6NSZ9 544 aa21.58■■□□□ 1.05
SEMA3B-209ENST00000456560 FAM13BQ9NYF5 915 aa21.58■■□□□ 1.05
SEMA3B-209ENST00000456560 LRP5O75197 1615 aa21.58■■□□□ 1.04
SEMA3B-209ENST00000456560 DDX60Q8IY21 1712 aaKnown RBP21.58■■□□□ 1.04
SEMA3B-209ENST00000456560 ATRNO75882 1429 aa21.58■■□□□ 1.04
SEMA3B-209ENST00000456560 NR1I2O75469 434 aa21.57■■□□□ 1.04
SEMA3B-209ENST00000456560 ATL3Q6DD88 541 aa21.57■■□□□ 1.04
SEMA3B-209ENST00000456560 FAM200AQ8TCP9 573 aa21.57■■□□□ 1.04
SEMA3B-209ENST00000456560 SYTL4Q96C24 671 aaPredicted RBP21.57■■□□□ 1.04
SEMA3B-209ENST00000456560 PRC1O43663 620 aa21.57■■□□□ 1.04
SEMA3B-209ENST00000456560 ANTXR2P58335 489 aa21.57■■□□□ 1.04
SEMA3B-209ENST00000456560 TTF1Q15361 905 aaPredicted RBP21.57■■□□□ 1.04
SEMA3B-209ENST00000456560 PIH1D3Q9NQM4 214 aaKnown RBP21.57■■□□□ 1.04
SEMA3B-209ENST00000456560 SPATA31A1Q5TZJ5 1347 aa21.57■■□□□ 1.04
SEMA3B-209ENST00000456560 WDR19Q8NEZ3 1342 aa21.57■■□□□ 1.04
SEMA3B-209ENST00000456560 ARID4AP29374 1257 aaPredicted RBP21.56■■□□□ 1.04
SEMA3B-209ENST00000456560 NCOA7Q8NI08 942 aa21.56■■□□□ 1.04
SEMA3B-209ENST00000456560 BICD2Q8TD16 824 aa21.56■■□□□ 1.04
SEMA3B-209ENST00000456560 AK7Q96M32 723 aa21.56■■□□□ 1.04
SEMA3B-209ENST00000456560 NAP1L2Q9ULW6 460 aaPredicted RBP21.56■■□□□ 1.04
SEMA3B-209ENST00000456560 CARMIL3Q8ND23 1372 aa21.56■■□□□ 1.04
SEMA3B-209ENST00000456560 DOT1LQ8TEK3 1739 aa21.56■■□□□ 1.04
SEMA3B-209ENST00000456560 FGFR2P21802 821 aa21.56■■□□□ 1.04
SEMA3B-209ENST00000456560 FOSBP53539 338 aa21.56■■□□□ 1.04
SEMA3B-209ENST00000456560 UBE3CQ15386 1083 aa21.56■■□□□ 1.04
SEMA3B-209ENST00000456560 CKAP2LQ8IYA6 745 aa21.56■■□□□ 1.04
SEMA3B-209ENST00000456560 KAT6BQ8WYB5 2073 aa21.56■■□□□ 1.04
SEMA3B-209ENST00000456560 BCL9LQ86UU0 1499 aa21.55■■□□□ 1.04
SEMA3B-209ENST00000456560 ZNF213O14771 459 aa21.55■■□□□ 1.04
SEMA3B-209ENST00000456560 EIF5P55010 431 aaKnown RBP21.55■■□□□ 1.04
SEMA3B-209ENST00000456560 CCDC102BQ68D86 513 aa21.55■■□□□ 1.04
SEMA3B-209ENST00000456560 ILDR1Q86SU0 546 aaPredicted RBP21.55■■□□□ 1.04
SEMA3B-209ENST00000456560 HPS5Q9UPZ3 1129 aa21.55■■□□□ 1.04
SEMA3B-209ENST00000456560 SLC9C2Q5TAH2 1124 aa21.55■■□□□ 1.04
SEMA3B-209ENST00000456560 MAP7D2Q96T17 732 aa21.55■■□□□ 1.04
SEMA3B-209ENST00000456560 UQCRFS1P1P0C7P4 283 aa21.54■■□□□ 1.04
SEMA3B-209ENST00000456560 PHKA1P46020 1223 aa21.54■■□□□ 1.04
SEMA3B-209ENST00000456560 INTS5Q6P9B9 1019 aaKnown RBP21.54■■□□□ 1.04
SEMA3B-209ENST00000456560 ZNF396Q96N95 335 aaPredicted RBP21.54■■□□□ 1.04
SEMA3B-209ENST00000456560 USP28Q96RU2 1077 aa21.54■■□□□ 1.04
SEMA3B-209ENST00000456560 NBPF3Q9H094 633 aa21.54■■□□□ 1.04
SEMA3B-209ENST00000456560 USP21Q9UK80 565 aa21.53■■□□□ 1.04
SEMA3B-209ENST00000456560 ARAP2Q8WZ64 1704 aa21.53■■□□□ 1.04
SEMA3B-209ENST00000456560 SPATA31A5Q5VU36 1347 aa21.53■■□□□ 1.04
SEMA3B-209ENST00000456560 MROH5Q6ZUA9 1318 aa21.53■■□□□ 1.04
SEMA3B-209ENST00000456560 SPATA31A7Q8IWB4 1347 aa21.53■■□□□ 1.04
SEMA3B-209ENST00000456560 CEBPZQ03701 1054 aaKnown RBP21.53■■□□□ 1.04
SEMA3B-209ENST00000456560 PUM3Q15397 648 aaKnown RBP21.53■■□□□ 1.04
SEMA3B-209ENST00000456560 LPIN2Q92539 896 aa21.53■■□□□ 1.04
SEMA3B-209ENST00000456560 FTOQ9C0B1 505 aaKnown RBP eCLIP21.53■■□□□ 1.04
SEMA3B-209ENST00000456560 MYO5AQ9Y4I1 1855 aaKnown RBP21.53■■□□□ 1.04
SEMA3B-209ENST00000456560 KLF18A0A0U1RQI7 1052 aa21.52■■□□□ 1.04
SEMA3B-209ENST00000456560 KIAA2012Q0VF49 1180 aa21.52■■□□□ 1.04
SEMA3B-209ENST00000456560 SASS6Q6UVJ0 657 aa21.52■■□□□ 1.04
SEMA3B-209ENST00000456560 CDCA7Q9BWT1 371 aaPredicted RBP21.52■■□□□ 1.04
SEMA3B-209ENST00000456560 TCRBV5S4A2TA0A5A2 114 aa21.52■■□□□ 1.04
SEMA3B-209ENST00000456560 PPFIA3O75145 1194 aa21.52■■□□□ 1.04
SEMA3B-209ENST00000456560 ANO6Q4KMQ2 910 aa21.52■■□□□ 1.04
SEMA3B-209ENST00000456560 SUSD4Q5VX71 490 aa21.52■■□□□ 1.04
SEMA3B-209ENST00000456560 RALYLQ86SE5 291 aaKnown RBP21.52■■□□□ 1.04
SEMA3B-209ENST00000456560 FNBP4Q8N3X1 1017 aaPredicted RBP21.52■■□□□ 1.04
SEMA3B-209ENST00000456560 MPNDQ8N594 471 aa21.52■■□□□ 1.04
SEMA3B-209ENST00000456560 PDE6AP16499 860 aa21.51■■□□□ 1.03
SEMA3B-209ENST00000456560 GUCY1B3Q02153 619 aa21.51■■□□□ 1.03
SEMA3B-209ENST00000456560 ZNF830Q96NB3 372 aaPredicted RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms