RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 KIAA0825Q8IV33 1275 aa20.18■□□□□ 0.82
SMPD4-214ENST00000455548 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.18■□□□□ 0.82
SMPD4-214ENST00000455548 ARAP2Q8WZ64 1704 aa20.17■□□□□ 0.82
SMPD4-214ENST00000455548 PNMA6EA0A0J9YXQ4 647 aa20.17■□□□□ 0.82
SMPD4-214ENST00000455548 TRAF5O00463 557 aa20.17■□□□□ 0.82
SMPD4-214ENST00000455548 FRAT2O75474 233 aaPredicted RBP20.17■□□□□ 0.82
SMPD4-214ENST00000455548 KRT26Q7Z3Y9 468 aa20.17■□□□□ 0.82
SMPD4-214ENST00000455548 CERS5Q8N5B7 392 aa20.17■□□□□ 0.82
SMPD4-214ENST00000455548 GGA3Q9NZ52 723 aa20.17■□□□□ 0.82
SMPD4-214ENST00000455548 MYH13Q9UKX3 1938 aa20.17■□□□□ 0.82
SMPD4-214ENST00000455548 BCAMP50895 628 aa20.16■□□□□ 0.82
SMPD4-214ENST00000455548 ATP8B2P98198 1209 aa20.16■□□□□ 0.82
SMPD4-214ENST00000455548 USP48Q86UV5 1035 aa20.16■□□□□ 0.82
SMPD4-214ENST00000455548 PITPNM2Q9BZ72 1349 aa20.16■□□□□ 0.82
SMPD4-214ENST00000455548 FMR1Q06787 632 aaKnown RBP eCLIP20.15■□□□□ 0.82
SMPD4-214ENST00000455548 G3BP1Q13283 466 aaKnown RBP eCLIP20.15■□□□□ 0.82
SMPD4-214ENST00000455548 POLA2Q14181 598 aa20.15■□□□□ 0.82
SMPD4-214ENST00000455548 MVPQ14764 893 aaKnown RBP20.15■□□□□ 0.82
SMPD4-214ENST00000455548 MFSD14BQ5SR56 506 aa20.15■□□□□ 0.82
SMPD4-214ENST00000455548 SULF1Q8IWU6 871 aa20.15■□□□□ 0.82
SMPD4-214ENST00000455548 JAG2Q9Y219 1238 aa20.15■□□□□ 0.82
SMPD4-214ENST00000455548 AKAP2Q9Y2D5 859 aa20.15■□□□□ 0.82
SMPD4-214ENST00000455548 ASTN2O75129 1339 aaPredicted RBP20.14■□□□□ 0.81
SMPD4-214ENST00000455548 ANGEL2Q5VTE6 544 aaKnown RBP20.14■□□□□ 0.81
SMPD4-214ENST00000455548 SSH3Q8TE77 659 aa20.14■□□□□ 0.81
SMPD4-214ENST00000455548 TBC1D22AQ8WUA7 517 aa20.14■□□□□ 0.81
SMPD4-214ENST00000455548 C1orf115Q9H7X2 142 aa20.14■□□□□ 0.81
SMPD4-214ENST00000455548 DDX19BQ9UMR2 479 aa20.14■□□□□ 0.81
SMPD4-214ENST00000455548 IQSEC3Q9UPP2 1182 aaPredicted RBP20.14■□□□□ 0.81
SMPD4-214ENST00000455548 CNTNAP1P78357 1384 aa20.13■□□□□ 0.81
SMPD4-214ENST00000455548 WNT10BO00744 389 aa20.13■□□□□ 0.81
SMPD4-214ENST00000455548 CELF2O95319 508 aaKnown RBP20.13■□□□□ 0.81
SMPD4-214ENST00000455548 CHAF1AQ13111 956 aaPredicted RBP20.13■□□□□ 0.81
SMPD4-214ENST00000455548 DLGAP5Q15398 846 aa20.13■□□□□ 0.81
SMPD4-214ENST00000455548 NBPF9Q3BBW0 867 aa20.13■□□□□ 0.81
SMPD4-214ENST00000455548 CST9Q5W186 159 aa20.13■□□□□ 0.81
SMPD4-214ENST00000455548 MTMR14Q8NCE2 650 aa20.13■□□□□ 0.81
SMPD4-214ENST00000455548 YTHDC1Q96MU7 727 aaKnown RBP20.13■□□□□ 0.81
SMPD4-214ENST00000455548 CHMP4BQ9H444 224 aaKnown RBP20.13■□□□□ 0.81
SMPD4-214ENST00000455548 GNL3LQ9NVN8 582 aaKnown RBP20.13■□□□□ 0.81
SMPD4-214ENST00000455548 ABT1Q9ULW3 272 aaKnown RBP20.13■□□□□ 0.81
SMPD4-214ENST00000455548 ECM29Q5VYK3 1845 aa20.12■□□□□ 0.81
SMPD4-214ENST00000455548 F8W031 263 aaPredicted RBP20.12■□□□□ 0.81
SMPD4-214ENST00000455548 TFCP2Q12800 502 aa20.12■□□□□ 0.81
SMPD4-214ENST00000455548 PDE3AQ14432 1141 aa20.12■□□□□ 0.81
SMPD4-214ENST00000455548 ZBED3Q96IU2 234 aaPredicted RBP20.12■□□□□ 0.81
SMPD4-214ENST00000455548 ADM5C9JUS6 153 aa20.11■□□□□ 0.81
SMPD4-214ENST00000455548 JMYQ8N9B5 988 aa20.11■□□□□ 0.81
SMPD4-214ENST00000455548 ZNF408Q9H9D4 720 aa20.11■□□□□ 0.81
SMPD4-214ENST00000455548 MKRN1Q9UHC7 482 aaKnown RBP20.11■□□□□ 0.81
SMPD4-214ENST00000455548 COG6Q9Y2V7 657 aa20.11■□□□□ 0.81
SMPD4-214ENST00000455548 RASSF10A6NK89 507 aa20.1■□□□□ 0.81
SMPD4-214ENST00000455548 DEFB115Q30KQ5 88 aa20.1■□□□□ 0.81
SMPD4-214ENST00000455548 TTF2Q9UNY4 1162 aaKnown RBP20.1■□□□□ 0.81
SMPD4-214ENST00000455548 A0A1B0GUL7 405 aa20.09■□□□□ 0.81
SMPD4-214ENST00000455548 ZBTB22O15209 634 aa20.09■□□□□ 0.81
SMPD4-214ENST00000455548 TIMM10P62072 90 aa20.09■□□□□ 0.81
SMPD4-214ENST00000455548 OS9Q13438 667 aaPredicted RBP20.09■□□□□ 0.81
SMPD4-214ENST00000455548 CFAP100Q494V2 611 aa20.09■□□□□ 0.81
SMPD4-214ENST00000455548 CEP85Q6P2H3 762 aa20.09■□□□□ 0.81
SMPD4-214ENST00000455548 APOBEC3FQ8IUX4 373 aaKnown RBP20.09■□□□□ 0.81
SMPD4-214ENST00000455548 WDR66Q8TBY9 1149 aa20.09■□□□□ 0.81
SMPD4-214ENST00000455548 SERPINA10Q9UK55 444 aa20.09■□□□□ 0.81
SMPD4-214ENST00000455548 SUGT1Q9Y2Z0 365 aa20.09■□□□□ 0.81
SMPD4-214ENST00000455548 TLL2Q9Y6L7 1015 aa20.09■□□□□ 0.81
SMPD4-214ENST00000455548 SEMA3EO15041 775 aa20.08■□□□□ 0.81
SMPD4-214ENST00000455548 SURF6O75683 361 aaKnown RBP20.08■□□□□ 0.81
SMPD4-214ENST00000455548 PHKA1P46020 1223 aa20.08■□□□□ 0.81
SMPD4-214ENST00000455548 RBM5P52756 815 aaKnown RBP eCLIP20.08■□□□□ 0.81
SMPD4-214ENST00000455548 ZBTB40Q9NUA8 1239 aa20.08■□□□□ 0.81
SMPD4-214ENST00000455548 NOP58Q9Y2X3 529 aaKnown RBP20.08■□□□□ 0.81
SMPD4-214ENST00000455548 MAST3O60307 1309 aa20.07■□□□□ 0.8
SMPD4-214ENST00000455548 SPDYE2BA6NHP3 402 aa20.07■□□□□ 0.8
SMPD4-214ENST00000455548 MYO1BO43795 1136 aa20.07■□□□□ 0.8
SMPD4-214ENST00000455548 SPDYE6P0CI01 402 aa20.07■□□□□ 0.8
SMPD4-214ENST00000455548 ADORA1P30542 326 aa20.07■□□□□ 0.8
SMPD4-214ENST00000455548 HDLBPQ00341 1268 aaKnown RBP20.07■□□□□ 0.8
SMPD4-214ENST00000455548 CCDC102BQ68D86 513 aa20.07■□□□□ 0.8
SMPD4-214ENST00000455548 DLK2Q6UY11 383 aa20.07■□□□□ 0.8
SMPD4-214ENST00000455548 C2orf69Q8N8R5 385 aa20.07■□□□□ 0.8
SMPD4-214ENST00000455548 CDCA5Q96FF9 252 aa20.07■□□□□ 0.8
SMPD4-214ENST00000455548 XAGE2Q96GT9 111 aa20.07■□□□□ 0.8
SMPD4-214ENST00000455548 NEUROD6Q96NK8 337 aa20.07■□□□□ 0.8
SMPD4-214ENST00000455548 DENND2AQ9ULE3 1009 aa20.07■□□□□ 0.8
SMPD4-214ENST00000455548 GORABQ5T7V8 394 aa20.06■□□□□ 0.8
SMPD4-214ENST00000455548 SAPCD2Q86UD0 394 aa20.06■□□□□ 0.8
SMPD4-214ENST00000455548 HHIPL1Q96JK4 782 aa20.06■□□□□ 0.8
SMPD4-214ENST00000455548 GBA2Q9HCG7 927 aaPredicted RBP20.06■□□□□ 0.8
SMPD4-214ENST00000455548 GPR108Q9NPR9 543 aa20.06■□□□□ 0.8
SMPD4-214ENST00000455548 PCNTO95613 3336 aa20.06■□□□□ 0.8
SMPD4-214ENST00000455548 VEGFBP49765 207 aa20.05■□□□□ 0.8
SMPD4-214ENST00000455548 C20orf194Q5TEA3 1177 aa20.05■□□□□ 0.8
SMPD4-214ENST00000455548 RPAP2Q8IXW5 612 aaPredicted RBP20.05■□□□□ 0.8
SMPD4-214ENST00000455548 MRIQ9BWK5 157 aa20.05■□□□□ 0.8
SMPD4-214ENST00000455548 COL1A1P02452 1464 aaPredicted RBP20.05■□□□□ 0.8
SMPD4-214ENST00000455548 PDS5AQ29RF7 1337 aaKnown RBP20.04■□□□□ 0.8
SMPD4-214ENST00000455548 HMMRO75330 724 aa20.04■□□□□ 0.8
SMPD4-214ENST00000455548 ECE1P42892 770 aa20.04■□□□□ 0.8
SMPD4-214ENST00000455548 CRKP46108 304 aa20.04■□□□□ 0.8
SMPD4-214ENST00000455548 GRIK5Q16478 980 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms