RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 PPP2R3BQ9Y5P8 575 aa23.84■■□□□ 1.41
MSH6-206ENST00000455383 FANCIQ9NVI1 1328 aa23.84■■□□□ 1.41
MSH6-206ENST00000455383 A0A1B0GUL6 1792 aa23.83■■□□□ 1.41
MSH6-206ENST00000455383 FKTNO75072 461 aa23.83■■□□□ 1.41
MSH6-206ENST00000455383 VAMP4O75379 141 aa23.83■■□□□ 1.41
MSH6-206ENST00000455383 PRPF38BQ5VTL8 546 aaKnown RBP23.83■■□□□ 1.41
MSH6-206ENST00000455383 TAF5LO75529 589 aa23.82■■□□□ 1.4
MSH6-206ENST00000455383 ALDH1A1P00352 501 aa23.82■■□□□ 1.4
MSH6-206ENST00000455383 FZD1Q9UP38 647 aa23.82■■□□□ 1.4
MSH6-206ENST00000455383 PCDHAC2Q9Y5I4 1007 aa23.82■■□□□ 1.4
MSH6-206ENST00000455383 LAMB1P07942 1786 aa23.81■■□□□ 1.4
MSH6-206ENST00000455383 UNCXA6NJT0 531 aa23.81■■□□□ 1.4
MSH6-206ENST00000455383 INHBEP58166 350 aa23.81■■□□□ 1.4
MSH6-206ENST00000455383 IFIT5Q13325 482 aaKnown RBP23.81■■□□□ 1.4
MSH6-206ENST00000455383 HELBQ8NG08 1087 aaPredicted RBP23.81■■□□□ 1.4
MSH6-206ENST00000455383 ECM29Q5VYK3 1845 aa23.81■■□□□ 1.4
MSH6-206ENST00000455383 MANSC4A6NHS7 340 aaPredicted RBP23.8■■□□□ 1.4
MSH6-206ENST00000455383 ZBTB48P10074 688 aaPredicted RBP23.8■■□□□ 1.4
MSH6-206ENST00000455383 BEND3Q5T5X7 828 aa23.8■■□□□ 1.4
MSH6-206ENST00000455383 SLC10A4Q96EP9 437 aa23.8■■□□□ 1.4
MSH6-206ENST00000455383 SPDYE2BA6NHP3 402 aa23.79■■□□□ 1.4
MSH6-206ENST00000455383 SPDYE6P0CI01 402 aa23.79■■□□□ 1.4
MSH6-206ENST00000455383 CFAP100Q494V2 611 aa23.79■■□□□ 1.4
MSH6-206ENST00000455383 ZNF804AQ7Z570 1209 aa23.79■■□□□ 1.4
MSH6-206ENST00000455383 IFNL1Q8IU54 200 aa23.79■■□□□ 1.4
MSH6-206ENST00000455383 WNK4Q96J92 1243 aa23.79■■□□□ 1.4
MSH6-206ENST00000455383 PRMT6Q96LA8 375 aaPredicted RBP23.79■■□□□ 1.4
MSH6-206ENST00000455383 PPP1R12BO60237 982 aaPredicted RBP23.78■■□□□ 1.4
MSH6-206ENST00000455383 CLMNQ96JQ2 1002 aa23.78■■□□□ 1.4
MSH6-206ENST00000455383 AOX1Q06278 1338 aa23.78■■□□□ 1.4
MSH6-206ENST00000455383 SUPT20HL1Q3ZLR7 823 aa23.77■■□□□ 1.4
MSH6-206ENST00000455383 EPHA10Q5JZY3 1008 aa23.77■■□□□ 1.4
MSH6-206ENST00000455383 WDR63Q8IWG1 891 aa23.77■■□□□ 1.4
MSH6-206ENST00000455383 CLRN2A0PK11 232 aa23.76■■□□□ 1.39
MSH6-206ENST00000455383 F6X3S4 739 aa23.76■■□□□ 1.39
MSH6-206ENST00000455383 IGF2BP3O00425 579 aaKnown RBP eCLIP23.76■■□□□ 1.39
MSH6-206ENST00000455383 MYO1BO43795 1136 aa23.76■■□□□ 1.39
MSH6-206ENST00000455383 EXOSC9Q06265 439 aaKnown RBP23.76■■□□□ 1.39
MSH6-206ENST00000455383 LMBR1LQ6UX01 489 aa23.76■■□□□ 1.39
MSH6-206ENST00000455383 F8W031 263 aaPredicted RBP23.75■■□□□ 1.39
MSH6-206ENST00000455383 NBPF12Q5TAG4 269 aaPredicted RBP23.75■■□□□ 1.39
MSH6-206ENST00000455383 FAM205AQ6ZU69 1335 aa23.75■■□□□ 1.39
MSH6-206ENST00000455383 USP2O75604 605 aaPredicted RBP23.74■■□□□ 1.39
MSH6-206ENST00000455383 ZNF594Q96JF6 807 aaPredicted RBP23.74■■□□□ 1.39
MSH6-206ENST00000455383 CHMP3Q9Y3E7 222 aa23.74■■□□□ 1.39
MSH6-206ENST00000455383 GRM8O00222 908 aa23.73■■□□□ 1.39
MSH6-206ENST00000455383 GJA5P36382 358 aa23.73■■□□□ 1.39
MSH6-206ENST00000455383 LDHAL6AQ6ZMR3 332 aa23.73■■□□□ 1.39
MSH6-206ENST00000455383 TDRD7Q8NHU6 1098 aaKnown RBP23.73■■□□□ 1.39
MSH6-206ENST00000455383 TESPA1A2RU30 521 aaPredicted RBP23.72■■□□□ 1.39
MSH6-206ENST00000455383 IREB2P48200 963 aaKnown RBP23.72■■□□□ 1.39
MSH6-206ENST00000455383 RASA3Q14644 834 aa23.72■■□□□ 1.39
MSH6-206ENST00000455383 CCDC57Q2TAC2 916 aa23.72■■□□□ 1.39
MSH6-206ENST00000455383 OTOP1Q7RTM1 612 aa23.72■■□□□ 1.39
MSH6-206ENST00000455383 VEZTQ9HBM0 779 aa23.72■■□□□ 1.39
MSH6-206ENST00000455383 JAG2Q9Y219 1238 aa23.72■■□□□ 1.39
MSH6-206ENST00000455383 TRIM17Q9Y577 477 aa23.72■■□□□ 1.39
MSH6-206ENST00000455383 SPDYE2Q495Y8 402 aa23.71■■□□□ 1.39
MSH6-206ENST00000455383 HTTP42858 3142 aa23.71■■□□□ 1.39
MSH6-206ENST00000455383 UBE4AQ14139 1066 aa23.7■■□□□ 1.38
MSH6-206ENST00000455383 ANKRD13AQ8IZ07 590 aa23.7■■□□□ 1.38
MSH6-206ENST00000455383 CNNM1Q9NRU3 951 aa23.7■■□□□ 1.38
MSH6-206ENST00000455383 PLIN1O60240 522 aa23.69■■□□□ 1.38
MSH6-206ENST00000455383 PTPN18Q99952 460 aa23.69■■□□□ 1.38
MSH6-206ENST00000455383 SPINK5Q9NQ38 1064 aaPredicted RBP23.69■■□□□ 1.38
MSH6-206ENST00000455383 ZNF70Q9UC06 446 aaPredicted RBP23.69■■□□□ 1.38
MSH6-206ENST00000455383 SERPINA10Q9UK55 444 aa23.69■■□□□ 1.38
MSH6-206ENST00000455383 ALDH1L1O75891 902 aa23.68■■□□□ 1.38
MSH6-206ENST00000455383 RBM5P52756 815 aaKnown RBP eCLIP23.68■■□□□ 1.38
MSH6-206ENST00000455383 CRHR2Q13324 411 aa23.68■■□□□ 1.38
MSH6-206ENST00000455383 TNFAIP1Q13829 316 aa23.68■■□□□ 1.38
MSH6-206ENST00000455383 TAF7LQ5H9L4 462 aa23.68■■□□□ 1.38
MSH6-206ENST00000455383 MFSD14BQ5SR56 506 aa23.68■■□□□ 1.38
MSH6-206ENST00000455383 INTS3Q68E01 1043 aaKnown RBP23.68■■□□□ 1.38
MSH6-206ENST00000455383 OTUD7BQ6GQQ9 843 aa23.68■■□□□ 1.38
MSH6-206ENST00000455383 ERO1AQ96HE7 468 aa23.68■■□□□ 1.38
MSH6-206ENST00000455383 FAM84BQ96KN1 310 aaPredicted RBP23.68■■□□□ 1.38
MSH6-206ENST00000455383 TEPSINQ96N21 525 aa23.68■■□□□ 1.38
MSH6-206ENST00000455383 HIBADHP31937 336 aaKnown RBP23.67■■□□□ 1.38
MSH6-206ENST00000455383 KAZALD1Q96I82 304 aa23.67■■□□□ 1.38
MSH6-206ENST00000455383 MRS2Q9HD23 443 aa23.67■■□□□ 1.38
MSH6-206ENST00000455383 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.67■■□□□ 1.38
MSH6-206ENST00000455383 PTPN22Q9Y2R2 807 aa23.67■■□□□ 1.38
MSH6-206ENST00000455383 OTOFQ9HC10 1997 aa23.66■■□□□ 1.38
MSH6-206ENST00000455383 GYG1P46976 350 aa23.66■■□□□ 1.38
MSH6-206ENST00000455383 MS4A4AQ96JQ5 239 aa23.66■■□□□ 1.38
MSH6-206ENST00000455383 TDRD3Q9H7E2 651 aaKnown RBP23.66■■□□□ 1.38
MSH6-206ENST00000455383 C9orf78Q9NZ63 289 aaPredicted RBP23.66■■□□□ 1.38
MSH6-206ENST00000455383 TTF2Q9UNY4 1162 aaKnown RBP23.66■■□□□ 1.38
MSH6-206ENST00000455383 SALL2Q9Y467 1007 aaPredicted RBP23.66■■□□□ 1.38
MSH6-206ENST00000455383 PUS3Q9BZE2 481 aaKnown RBP23.65■■□□□ 1.38
MSH6-206ENST00000455383 RIPOR2Q9Y4F9 1068 aa23.65■■□□□ 1.38
MSH6-206ENST00000455383 ARAP2Q8WZ64 1704 aa23.64■■□□□ 1.38
MSH6-206ENST00000455383 POTEFA5A3E0 1075 aa23.64■■□□□ 1.37
MSH6-206ENST00000455383 CAP1Q01518 475 aa23.64■■□□□ 1.37
MSH6-206ENST00000455383 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.64■■□□□ 1.37
MSH6-206ENST00000455383 CDAN1Q8IWY9 1227 aa23.64■■□□□ 1.37
MSH6-206ENST00000455383 DZIP1LQ8IYY4 767 aaKnown RBP23.64■■□□□ 1.37
MSH6-206ENST00000455383 CD99L2Q8TCZ2 262 aa23.64■■□□□ 1.37
MSH6-206ENST00000455383 ARMC5Q96C12 935 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms