RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 SDSP20132 328 aa20.18■□□□□ 0.82
CCDC90B-202ENST00000455220 LARGE2Q8N3Y3 721 aa20.18■□□□□ 0.82
CCDC90B-202ENST00000455220 DBNDD1Q9H9R9 158 aa20.18■□□□□ 0.82
CCDC90B-202ENST00000455220 SNRKQ9NRH2 765 aa20.18■□□□□ 0.82
CCDC90B-202ENST00000455220 PAG1Q9NWQ8 432 aa20.18■□□□□ 0.82
CCDC90B-202ENST00000455220 FAM205AQ6ZU69 1335 aa20.18■□□□□ 0.82
CCDC90B-202ENST00000455220 FRAT2O75474 233 aaPredicted RBP20.17■□□□□ 0.82
CCDC90B-202ENST00000455220 CYP2E1P05181 493 aaPredicted RBP20.17■□□□□ 0.82
CCDC90B-202ENST00000455220 PRELPP51888 382 aa20.17■□□□□ 0.82
CCDC90B-202ENST00000455220 ARHGAP27Q6ZUM4 889 aa20.17■□□□□ 0.82
CCDC90B-202ENST00000455220 PELP1Q8IZL8 1130 aaKnown RBP20.17■□□□□ 0.82
CCDC90B-202ENST00000455220 SCN9AQ15858 1988 aa20.17■□□□□ 0.82
CCDC90B-202ENST00000455220 AK9Q5TCS8 1911 aa20.17■□□□□ 0.82
CCDC90B-202ENST00000455220 GOLIM4O00461 696 aa20.17■□□□□ 0.82
CCDC90B-202ENST00000455220 MAP4K4O95819 1239 aaPredicted RBP20.17■□□□□ 0.82
CCDC90B-202ENST00000455220 CNTROBQ8N137 903 aa20.17■□□□□ 0.82
CCDC90B-202ENST00000455220 EVI5LQ96CN4 794 aa20.17■□□□□ 0.82
CCDC90B-202ENST00000455220 EDC3Q96F86 508 aaKnown RBP20.17■□□□□ 0.82
CCDC90B-202ENST00000455220 SBF1O95248 1867 aa20.16■□□□□ 0.82
CCDC90B-202ENST00000455220 ZNF646O15015 1829 aaPredicted RBP20.16■□□□□ 0.82
CCDC90B-202ENST00000455220 PSME4Q14997 1843 aa20.16■□□□□ 0.82
CCDC90B-202ENST00000455220 SALL1Q9NSC2 1324 aa20.16■□□□□ 0.82
CCDC90B-202ENST00000455220 CCDC88AQ3V6T2 1871 aa20.16■□□□□ 0.82
CCDC90B-202ENST00000455220 TRIM6-TRIM34B2RNG4 842 aa20.16■□□□□ 0.82
CCDC90B-202ENST00000455220 G3V3G9 751 aa20.16■□□□□ 0.82
CCDC90B-202ENST00000455220 DCAF8Q5TAQ9 597 aa20.16■□□□□ 0.82
CCDC90B-202ENST00000455220 ANTXR1Q9H6X2 564 aa20.16■□□□□ 0.82
CCDC90B-202ENST00000455220 DOCK2Q92608 1830 aa20.16■□□□□ 0.82
CCDC90B-202ENST00000455220 DICER1Q9UPY3 1922 aaKnown RBP20.15■□□□□ 0.82
CCDC90B-202ENST00000455220 TTF1Q15361 905 aaPredicted RBP20.15■□□□□ 0.82
CCDC90B-202ENST00000455220 GPR162Q16538 588 aa20.15■□□□□ 0.82
CCDC90B-202ENST00000455220 YDJCA8MPS7 323 aa20.14■□□□□ 0.81
CCDC90B-202ENST00000455220 CHAF1AQ13111 956 aaPredicted RBP20.14■□□□□ 0.81
CCDC90B-202ENST00000455220 TICAM2Q86XR7 235 aa20.14■□□□□ 0.81
CCDC90B-202ENST00000455220 NIM1KQ8IY84 436 aa20.14■□□□□ 0.81
CCDC90B-202ENST00000455220 KBTBD3Q8NAB2 608 aa20.14■□□□□ 0.81
CCDC90B-202ENST00000455220 WDR66Q8TBY9 1149 aa20.14■□□□□ 0.81
CCDC90B-202ENST00000455220 RILPL2Q969X0 211 aa20.14■□□□□ 0.81
CCDC90B-202ENST00000455220 GRIN3BO60391 1043 aa20.13■□□□□ 0.81
CCDC90B-202ENST00000455220 LMNB1P20700 586 aa20.13■□□□□ 0.81
CCDC90B-202ENST00000455220 PIH1D3Q9NQM4 214 aaKnown RBP20.13■□□□□ 0.81
CCDC90B-202ENST00000455220 ZNRF3Q9ULT6 936 aa20.13■□□□□ 0.81
CCDC90B-202ENST00000455220 RFX7Q2KHR2 1363 aa20.13■□□□□ 0.81
CCDC90B-202ENST00000455220 MYO5AQ9Y4I1 1855 aaKnown RBP20.13■□□□□ 0.81
CCDC90B-202ENST00000455220 GTF2IP78347 998 aa20.12■□□□□ 0.81
CCDC90B-202ENST00000455220 TBC1D22AQ8WUA7 517 aa20.12■□□□□ 0.81
CCDC90B-202ENST00000455220 JDP2Q8WYK2 163 aa20.12■□□□□ 0.81
CCDC90B-202ENST00000455220 KCNQ5Q9NR82 932 aa20.12■□□□□ 0.81
CCDC90B-202ENST00000455220 IGSF3O75054 1194 aa20.12■□□□□ 0.81
CCDC90B-202ENST00000455220 STRIP1Q5VSL9 837 aa20.12■□□□□ 0.81
CCDC90B-202ENST00000455220 TTLL5Q6EMB2 1281 aa20.12■□□□□ 0.81
CCDC90B-202ENST00000455220 TBC1D9Q6ZT07 1266 aa20.12■□□□□ 0.81
CCDC90B-202ENST00000455220 ZGPATQ8N5A5 531 aaKnown RBP20.12■□□□□ 0.81
CCDC90B-202ENST00000455220 JAG2Q9Y219 1238 aa20.12■□□□□ 0.81
CCDC90B-202ENST00000455220 MYH7P12883 1935 aa20.11■□□□□ 0.81
CCDC90B-202ENST00000455220 FKBP1AP62942 108 aaKnown RBP20.11■□□□□ 0.81
CCDC90B-202ENST00000455220 FSD1Q9BTV5 496 aa20.11■□□□□ 0.81
CCDC90B-202ENST00000455220 USP17L3A6NCW0 530 aa20.1■□□□□ 0.81
CCDC90B-202ENST00000455220 USP17L4A6NCW7 530 aa20.1■□□□□ 0.81
CCDC90B-202ENST00000455220 DACT2Q5SW24 774 aa20.1■□□□□ 0.81
CCDC90B-202ENST00000455220 USP17L1Q7RTZ2 530 aa20.1■□□□□ 0.81
CCDC90B-202ENST00000455220 FZD9O00144 591 aa20.09■□□□□ 0.81
CCDC90B-202ENST00000455220 MFSD14BQ5SR56 506 aa20.09■□□□□ 0.81
CCDC90B-202ENST00000455220 ABCF2Q9UG63 623 aa20.09■□□□□ 0.81
CCDC90B-202ENST00000455220 MAST2Q6P0Q8 1798 aa20.08■□□□□ 0.81
CCDC90B-202ENST00000455220 SPTY2D1Q68D10 685 aaPredicted RBP20.08■□□□□ 0.81
CCDC90B-202ENST00000455220 CERS5Q8N5B7 392 aa20.08■□□□□ 0.81
CCDC90B-202ENST00000455220 SUGT1Q9Y2Z0 365 aa20.08■□□□□ 0.81
CCDC90B-202ENST00000455220 CDC45O75419 566 aa20.08■□□□□ 0.8
CCDC90B-202ENST00000455220 IDH1O75874 414 aaKnown RBP20.08■□□□□ 0.8
CCDC90B-202ENST00000455220 VIL1P09327 827 aaKnown RBP20.08■□□□□ 0.8
CCDC90B-202ENST00000455220 PRDX5P30044 214 aa20.08■□□□□ 0.8
CCDC90B-202ENST00000455220 MAP3K12Q12852 859 aa20.08■□□□□ 0.8
CCDC90B-202ENST00000455220 LRRFIP1Q32MZ4 808 aaKnown RBP20.08■□□□□ 0.8
CCDC90B-202ENST00000455220 ERICH6Q7L0X2 663 aa20.08■□□□□ 0.8
CCDC90B-202ENST00000455220 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.08■□□□□ 0.8
CCDC90B-202ENST00000455220 LRP2BPQ9P2M1 347 aa20.08■□□□□ 0.8
CCDC90B-202ENST00000455220 TIAM2Q8IVF5 1701 aa20.07■□□□□ 0.8
CCDC90B-202ENST00000455220 HIP1O00291 1037 aa20.07■□□□□ 0.8
CCDC90B-202ENST00000455220 ZFYP08048 801 aaPredicted RBP20.07■□□□□ 0.8
CCDC90B-202ENST00000455220 CHMLP26374 656 aa20.07■□□□□ 0.8
CCDC90B-202ENST00000455220 CXCL9Q07325 125 aa20.07■□□□□ 0.8
CCDC90B-202ENST00000455220 ZSCAN25Q6NSZ9 544 aa20.07■□□□□ 0.8
CCDC90B-202ENST00000455220 TMED8Q6PL24 325 aaPredicted RBP20.07■□□□□ 0.8
CCDC90B-202ENST00000455220 FBXW7Q969H0 707 aa20.07■□□□□ 0.8
CCDC90B-202ENST00000455220 PSMD14O00487 310 aa20.06■□□□□ 0.8
CCDC90B-202ENST00000455220 RAD17O75943 681 aa20.06■□□□□ 0.8
CCDC90B-202ENST00000455220 LDHBP07195 334 aaKnown RBP20.06■□□□□ 0.8
CCDC90B-202ENST00000455220 ADD2P35612 726 aa20.06■□□□□ 0.8
CCDC90B-202ENST00000455220 GRIK5Q16478 980 aa20.06■□□□□ 0.8
CCDC90B-202ENST00000455220 RNF113AO15541 343 aaKnown RBP20.05■□□□□ 0.8
CCDC90B-202ENST00000455220 PDE6AP16499 860 aa20.05■□□□□ 0.8
CCDC90B-202ENST00000455220 UBE3CQ15386 1083 aa20.05■□□□□ 0.8
CCDC90B-202ENST00000455220 SLC9C2Q5TAH2 1124 aa20.05■□□□□ 0.8
CCDC90B-202ENST00000455220 CIAPIN1Q6FI81 312 aa20.05■□□□□ 0.8
CCDC90B-202ENST00000455220 RSBN1LQ6PCB5 846 aaPredicted RBP20.05■□□□□ 0.8
CCDC90B-202ENST00000455220 ZNF384Q8TF68 577 aa20.05■□□□□ 0.8
CCDC90B-202ENST00000455220 NSUN4Q96CB9 384 aaKnown RBP20.05■□□□□ 0.8
CCDC90B-202ENST00000455220 MXD3Q9BW11 206 aa20.05■□□□□ 0.8
CCDC90B-202ENST00000455220 RAI14Q9P0K7 980 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms