RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 ZNF532Q9HCE3 1301 aa10.48□□□□□ -0.73
RPE-216ENST00000454822 ARAP2Q8WZ64 1704 aa10.48□□□□□ -0.73
RPE-216ENST00000454822 LAMA4Q16363 1823 aa10.48□□□□□ -0.73
RPE-216ENST00000454822 TCRBV5S4A2TA0A5A2 114 aa10.48□□□□□ -0.73
RPE-216ENST00000454822 HAND2P61296 217 aa10.48□□□□□ -0.73
RPE-216ENST00000454822 IMMTQ16891 758 aaKnown RBP10.48□□□□□ -0.73
RPE-216ENST00000454822 USP48Q86UV5 1035 aa10.48□□□□□ -0.73
RPE-216ENST00000454822 AMIGO3Q86WK7 504 aa10.48□□□□□ -0.73
RPE-216ENST00000454822 GTF3C6Q969F1 213 aa10.48□□□□□ -0.73
RPE-216ENST00000454822 AGXT2Q9BYV1 514 aa10.48□□□□□ -0.73
RPE-216ENST00000454822 NYXQ9GZU5 481 aa10.48□□□□□ -0.73
RPE-216ENST00000454822 BSDC1Q9NW68 430 aaPredicted RBP10.48□□□□□ -0.73
RPE-216ENST00000454822 BRPF3Q9ULD4 1205 aa10.48□□□□□ -0.73
RPE-216ENST00000454822 WWC3Q9ULE0 1092 aa10.48□□□□□ -0.73
RPE-216ENST00000454822 NSFL1CQ9UNZ2 370 aaKnown RBP10.48□□□□□ -0.73
RPE-216ENST00000454822 MYO5AQ9Y4I1 1855 aaKnown RBP10.48□□□□□ -0.73
RPE-216ENST00000454822 ATRNO75882 1429 aa10.48□□□□□ -0.73
RPE-216ENST00000454822 COL4A1P02462 1669 aa10.48□□□□□ -0.73
RPE-216ENST00000454822 PDIA4P13667 645 aaKnown RBP10.48□□□□□ -0.73
RPE-216ENST00000454822 MRE11P49959 708 aa10.48□□□□□ -0.73
RPE-216ENST00000454822 GDPD2Q9HCC8 539 aa10.48□□□□□ -0.73
RPE-216ENST00000454822 ATP6V1DQ9Y5K8 247 aa10.48□□□□□ -0.73
RPE-216ENST00000454822 TCHHQ07283 1943 aa10.48□□□□□ -0.73
RPE-216ENST00000454822 VPS37CA5D8V6 355 aaPredicted RBP10.47□□□□□ -0.73
RPE-216ENST00000454822 ZNF213O14771 459 aa10.47□□□□□ -0.73
RPE-216ENST00000454822 PFKFB2O60825 505 aa10.47□□□□□ -0.73
RPE-216ENST00000454822 MBD3O95983 291 aa10.47□□□□□ -0.73
RPE-216ENST00000454822 PDCP20941 246 aa10.47□□□□□ -0.73
RPE-216ENST00000454822 MAP3K12Q12852 859 aa10.47□□□□□ -0.73
RPE-216ENST00000454822 CHST3Q7LGC8 479 aa10.47□□□□□ -0.73
RPE-216ENST00000454822 NBPF5PQ86XG9 351 aaPredicted RBP10.47□□□□□ -0.73
RPE-216ENST00000454822 NLRP3Q96P20 1036 aa10.47□□□□□ -0.73
RPE-216ENST00000454822 GRPEL1Q9HAV7 217 aa10.47□□□□□ -0.73
RPE-216ENST00000454822 RBM27Q9P2N5 1060 aaKnown RBP10.47□□□□□ -0.73
RPE-216ENST00000454822 APOBRQ0VD83 1088 aa10.46□□□□□ -0.73
RPE-216ENST00000454822 SCRN1Q12765 414 aa10.46□□□□□ -0.73
RPE-216ENST00000454822 ZSCAN23Q3MJ62 389 aa10.46□□□□□ -0.73
RPE-216ENST00000454822 TRAPPC3LQ5T215 181 aa10.46□□□□□ -0.73
RPE-216ENST00000454822 TPTE2Q6XPS3 522 aa10.46□□□□□ -0.73
RPE-216ENST00000454822 TMEM87AQ8NBN3 555 aa10.46□□□□□ -0.73
RPE-216ENST00000454822 CELF1Q92879 486 aaKnown RBP10.46□□□□□ -0.73
RPE-216ENST00000454822 STRBPQ96SI9 672 aaKnown RBP10.46□□□□□ -0.73
RPE-216ENST00000454822 BCL11BQ9C0K0 894 aaPredicted RBP10.46□□□□□ -0.73
RPE-216ENST00000454822 QTRT2Q9H974 415 aaKnown RBP10.46□□□□□ -0.73
RPE-216ENST00000454822 MINPP1Q9UNW1 487 aa10.46□□□□□ -0.73
RPE-216ENST00000454822 CNPY2Q9Y2B0 182 aa10.46□□□□□ -0.73
RPE-216ENST00000454822 SCN7AQ01118 1682 aa10.46□□□□□ -0.73
RPE-216ENST00000454822 TAF1P21675 1872 aa10.46□□□□□ -0.73
RPE-216ENST00000454822 SBF2Q86WG5 1849 aa10.46□□□□□ -0.74
RPE-216ENST00000454822 WTIPA6NIX2 430 aaPredicted RBP10.46□□□□□ -0.74
RPE-216ENST00000454822 JAK2O60674 1132 aa10.46□□□□□ -0.74
RPE-216ENST00000454822 GADD45BO75293 160 aaPredicted RBP10.46□□□□□ -0.74
RPE-216ENST00000454822 ZNF445P59923 1031 aa10.46□□□□□ -0.74
RPE-216ENST00000454822 UBE4AQ14139 1066 aa10.46□□□□□ -0.74
RPE-216ENST00000454822 FBXL16Q8N461 479 aa10.46□□□□□ -0.74
RPE-216ENST00000454822 CCDC24Q8N4L8 307 aa10.46□□□□□ -0.74
RPE-216ENST00000454822 MAGEB6Q8N7X4 407 aa10.46□□□□□ -0.74
RPE-216ENST00000454822 LY75O60449 1722 aa10.45□□□□□ -0.74
RPE-216ENST00000454822 APPP05067 770 aa10.45□□□□□ -0.74
RPE-216ENST00000454822 RFC4P35249 363 aa10.45□□□□□ -0.74
RPE-216ENST00000454822 RPS8P62241 208 aaKnown RBP10.45□□□□□ -0.74
RPE-216ENST00000454822 FAM196AQ6ZSG2 479 aa10.45□□□□□ -0.74
RPE-216ENST00000454822 AIDAQ96BJ3 306 aa10.45□□□□□ -0.74
RPE-216ENST00000454822 LLPHQ9BRT6 129 aaKnown RBP10.45□□□□□ -0.74
RPE-216ENST00000454822 TMEM63CQ9P1W3 806 aa10.45□□□□□ -0.74
RPE-216ENST00000454822 PATL2C9JE40 543 aaKnown RBP10.45□□□□□ -0.74
RPE-216ENST00000454822 PHF14O94880 888 aa10.45□□□□□ -0.74
RPE-216ENST00000454822 PDIA3P30101 505 aaKnown RBP10.45□□□□□ -0.74
RPE-216ENST00000454822 MCM5P33992 734 aa10.45□□□□□ -0.74
RPE-216ENST00000454822 GYG1P46976 350 aa10.45□□□□□ -0.74
RPE-216ENST00000454822 DNM1Q05193 864 aaKnown RBP10.45□□□□□ -0.74
RPE-216ENST00000454822 CDC37L1Q7L3B6 337 aa10.45□□□□□ -0.74
RPE-216ENST00000454822 MB21D2Q8IYB1 491 aaPredicted RBP10.45□□□□□ -0.74
RPE-216ENST00000454822 NCOA7Q8NI08 942 aa10.45□□□□□ -0.74
RPE-216ENST00000454822 SMARCC2Q8TAQ2 1214 aa10.45□□□□□ -0.74
RPE-216ENST00000454822 ZNF274Q96GC6 653 aaPredicted RBP10.45□□□□□ -0.74
RPE-216ENST00000454822 LRRC4BQ9NT99 713 aa10.45□□□□□ -0.74
RPE-216ENST00000454822 TAF1LQ8IZX4 1826 aa10.45□□□□□ -0.74
RPE-216ENST00000454822 ZNF804BA4D1E1 1349 aa10.44□□□□□ -0.74
RPE-216ENST00000454822 PRC1O43663 620 aa10.44□□□□□ -0.74
RPE-216ENST00000454822 EVCP57679 992 aa10.44□□□□□ -0.74
RPE-216ENST00000454822 CCT2P78371 535 aaKnown RBP10.44□□□□□ -0.74
RPE-216ENST00000454822 ALX1Q15699 326 aa10.44□□□□□ -0.74
RPE-216ENST00000454822 DDX11Q96FC9 970 aa10.44□□□□□ -0.74
RPE-216ENST00000454822 PANK2Q9BZ23 570 aa10.44□□□□□ -0.74
RPE-216ENST00000454822 NBPF3Q9H094 633 aa10.44□□□□□ -0.74
RPE-216ENST00000454822 GPHNQ9NQX3 736 aaPredicted RBP10.44□□□□□ -0.74
RPE-216ENST00000454822 GNL3LQ9NVN8 582 aaKnown RBP10.44□□□□□ -0.74
RPE-216ENST00000454822 IQSEC3Q9UPP2 1182 aaPredicted RBP10.44□□□□□ -0.74
RPE-216ENST00000454822 MBD4O95243 580 aa10.43□□□□□ -0.74
RPE-216ENST00000454822 CTDNEP1O95476 244 aa10.43□□□□□ -0.74
RPE-216ENST00000454822 TM4SF1P30408 202 aa10.43□□□□□ -0.74
RPE-216ENST00000454822 ANTXR2P58335 489 aa10.43□□□□□ -0.74
RPE-216ENST00000454822 FERMT3Q86UX7 667 aa10.43□□□□□ -0.74
RPE-216ENST00000454822 NSUN7Q8NE18 718 aaKnown RBP10.43□□□□□ -0.74
RPE-216ENST00000454822 LRP2BPQ9P2M1 347 aa10.43□□□□□ -0.74
RPE-216ENST00000454822 NAP1L2Q9ULW6 460 aaPredicted RBP10.43□□□□□ -0.74
RPE-216ENST00000454822 CASZ1Q86V15 1759 aa10.43□□□□□ -0.74
RPE-216ENST00000454822 DOCK2Q92608 1830 aa10.43□□□□□ -0.74
RPE-216ENST00000454822 FIBPO43427 364 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms