RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 SAMD7Q7Z3H4 446 aa17.57■□□□□ 0.4
HDAC4-205ENST00000454542 TRPM7Q96QT4 1865 aa17.56■□□□□ 0.4
HDAC4-205ENST00000454542 BCAMP50895 628 aa17.56■□□□□ 0.4
HDAC4-205ENST00000454542 TFCP2Q12800 502 aa17.56■□□□□ 0.4
HDAC4-205ENST00000454542 TBC1D10BQ4KMP7 808 aaPredicted RBP17.55■□□□□ 0.4
HDAC4-205ENST00000454542 MAP1SQ66K74 1059 aaPredicted RBP17.55■□□□□ 0.4
HDAC4-205ENST00000454542 SIRT2Q8IXJ6 389 aa17.55■□□□□ 0.4
HDAC4-205ENST00000454542 RPAP2Q8IXW5 612 aaPredicted RBP17.55■□□□□ 0.4
HDAC4-205ENST00000454542 FBXW7Q969H0 707 aa17.55■□□□□ 0.4
HDAC4-205ENST00000454542 ZBED3Q96IU2 234 aaPredicted RBP17.55■□□□□ 0.4
HDAC4-205ENST00000454542 MYOZ2Q9NPC6 264 aa17.55■□□□□ 0.4
HDAC4-205ENST00000454542 GPR108Q9NPR9 543 aa17.55■□□□□ 0.4
HDAC4-205ENST00000454542 A0A1B0GUL7 405 aa17.54■□□□□ 0.4
HDAC4-205ENST00000454542 ADORA1P30542 326 aa17.54■□□□□ 0.4
HDAC4-205ENST00000454542 APLP1P51693 650 aa17.54■□□□□ 0.4
HDAC4-205ENST00000454542 G3BP1Q13283 466 aaKnown RBP eCLIP17.54■□□□□ 0.4
HDAC4-205ENST00000454542 CNTROBQ8N137 903 aa17.54■□□□□ 0.4
HDAC4-205ENST00000454542 CLEC11AQ9Y240 323 aa17.54■□□□□ 0.4
HDAC4-205ENST00000454542 AKAP2Q9Y2D5 859 aa17.54■□□□□ 0.4
HDAC4-205ENST00000454542 PDS5AQ29RF7 1337 aaKnown RBP17.53■□□□□ 0.4
HDAC4-205ENST00000454542 MFSD14BQ5SR56 506 aa17.53■□□□□ 0.4
HDAC4-205ENST00000454542 VPS37DQ86XT2 251 aa17.53■□□□□ 0.4
HDAC4-205ENST00000454542 KIAA0825Q8IV33 1275 aa17.53■□□□□ 0.4
HDAC4-205ENST00000454542 MTMR14Q8NCE2 650 aa17.53■□□□□ 0.4
HDAC4-205ENST00000454542 JAG2Q9Y219 1238 aa17.53■□□□□ 0.4
HDAC4-205ENST00000454542 PITPNM2Q9BZ72 1349 aa17.52■□□□□ 0.4
HDAC4-205ENST00000454542 SEMA3EO15041 775 aa17.52■□□□□ 0.4
HDAC4-205ENST00000454542 SURF6O75683 361 aaKnown RBP17.52■□□□□ 0.4
HDAC4-205ENST00000454542 PHKA1P46020 1223 aa17.52■□□□□ 0.4
HDAC4-205ENST00000454542 TBC1D22AQ8WUA7 517 aa17.52■□□□□ 0.4
HDAC4-205ENST00000454542 IQSEC3Q9UPP2 1182 aaPredicted RBP17.52■□□□□ 0.4
HDAC4-205ENST00000454542 ASTN2O75129 1339 aaPredicted RBP17.51■□□□□ 0.39
HDAC4-205ENST00000454542 CCDC102BQ68D86 513 aa17.51■□□□□ 0.39
HDAC4-205ENST00000454542 OGFOD1Q8N543 542 aa17.51■□□□□ 0.39
HDAC4-205ENST00000454542 XAGE2Q96GT9 111 aa17.51■□□□□ 0.39
HDAC4-205ENST00000454542 GGA3Q9NZ52 723 aa17.51■□□□□ 0.39
HDAC4-205ENST00000454542 HDAC9Q9UKV0 1011 aa17.51■□□□□ 0.39
HDAC4-205ENST00000454542 CEP350Q5VT06 3117 aa17.51■□□□□ 0.39
HDAC4-205ENST00000454542 SALL1Q9NSC2 1324 aa17.5■□□□□ 0.39
HDAC4-205ENST00000454542 POLR2AP24928 1970 aaKnown RBP17.5■□□□□ 0.39
HDAC4-205ENST00000454542 WNT10BO00744 389 aa17.5■□□□□ 0.39
HDAC4-205ENST00000454542 HMMRO75330 724 aa17.5■□□□□ 0.39
HDAC4-205ENST00000454542 TIMM10P62072 90 aa17.5■□□□□ 0.39
HDAC4-205ENST00000454542 TNNI3KQ59H18 835 aa17.5■□□□□ 0.39
HDAC4-205ENST00000454542 SUGT1Q9Y2Z0 365 aa17.5■□□□□ 0.39
HDAC4-205ENST00000454542 FPGT-TNNI3KV9GXZ4 949 aa17.5■□□□□ 0.39
HDAC4-205ENST00000454542 AKAP11Q9UKA4 1901 aa17.5■□□□□ 0.39
HDAC4-205ENST00000454542 MAST2Q6P0Q8 1798 aa17.5■□□□□ 0.39
HDAC4-205ENST00000454542 CHAF1AQ13111 956 aaPredicted RBP17.49■□□□□ 0.39
HDAC4-205ENST00000454542 SCARF1Q14162 830 aa17.49■□□□□ 0.39
HDAC4-205ENST00000454542 GRIK5Q16478 980 aa17.49■□□□□ 0.39
HDAC4-205ENST00000454542 RBM26Q5T8P6 1007 aaKnown RBP17.49■□□□□ 0.39
HDAC4-205ENST00000454542 GLIS2Q9BZE0 524 aaPredicted RBP17.49■□□□□ 0.39
HDAC4-205ENST00000454542 CREBZFQ9NS37 354 aa17.49■□□□□ 0.39
HDAC4-205ENST00000454542 EXOC6BQ9Y2D4 811 aa17.49■□□□□ 0.39
HDAC4-205ENST00000454542 THSD7BQ9C0I4 1608 aa17.49■□□□□ 0.39
HDAC4-205ENST00000454542 TRAF5O00463 557 aa17.48■□□□□ 0.39
HDAC4-205ENST00000454542 ARID4AP29374 1257 aaPredicted RBP17.48■□□□□ 0.39
HDAC4-205ENST00000454542 OS9Q13438 667 aaPredicted RBP17.48■□□□□ 0.39
HDAC4-205ENST00000454542 RASGRF1Q13972 1273 aa17.48■□□□□ 0.39
HDAC4-205ENST00000454542 NBPF9Q3BBW0 867 aa17.48■□□□□ 0.39
HDAC4-205ENST00000454542 CDC37L1Q7L3B6 337 aa17.48■□□□□ 0.39
HDAC4-205ENST00000454542 ERC1Q8IUD2 1116 aa17.48■□□□□ 0.39
HDAC4-205ENST00000454542 WDR66Q8TBY9 1149 aa17.48■□□□□ 0.39
HDAC4-205ENST00000454542 GNL3LQ9NVN8 582 aaKnown RBP17.48■□□□□ 0.39
HDAC4-205ENST00000454542 DENND2AQ9ULE3 1009 aa17.48■□□□□ 0.39
HDAC4-205ENST00000454542 SPDYE2BA6NHP3 402 aa17.47■□□□□ 0.39
HDAC4-205ENST00000454542 SPDYE6P0CI01 402 aa17.47■□□□□ 0.39
HDAC4-205ENST00000454542 HDLBPQ00341 1268 aaKnown RBP17.47■□□□□ 0.39
HDAC4-205ENST00000454542 FMR1Q06787 632 aaKnown RBP eCLIP17.47■□□□□ 0.39
HDAC4-205ENST00000454542 HSP90AB4PQ58FF6 505 aa17.47■□□□□ 0.39
HDAC4-205ENST00000454542 ANGEL2Q5VTE6 544 aaKnown RBP17.47■□□□□ 0.39
HDAC4-205ENST00000454542 SERPINA10Q9UK55 444 aa17.47■□□□□ 0.39
HDAC4-205ENST00000454542 TTF2Q9UNY4 1162 aaKnown RBP17.47■□□□□ 0.39
HDAC4-205ENST00000454542 ADM5C9JUS6 153 aa17.46■□□□□ 0.39
HDAC4-205ENST00000454542 F8W031 263 aaPredicted RBP17.46■□□□□ 0.39
HDAC4-205ENST00000454542 FRAT2O75474 233 aaPredicted RBP17.46■□□□□ 0.39
HDAC4-205ENST00000454542 CFAP100Q494V2 611 aa17.46■□□□□ 0.39
HDAC4-205ENST00000454542 KRT26Q7Z3Y9 468 aa17.46■□□□□ 0.39
HDAC4-205ENST00000454542 CRBNQ96SW2 442 aa17.46■□□□□ 0.39
HDAC4-205ENST00000454542 DBNDD2Q9BQY9 259 aa17.46■□□□□ 0.39
HDAC4-205ENST00000454542 DBNLQ9UJU6 430 aaKnown RBP17.46■□□□□ 0.39
HDAC4-205ENST00000454542 PCDHAC2Q9Y5I4 1007 aa17.46■□□□□ 0.39
HDAC4-205ENST00000454542 MAST3O60307 1309 aa17.46■□□□□ 0.38
HDAC4-205ENST00000454542 AOX1Q06278 1338 aa17.46■□□□□ 0.38
HDAC4-205ENST00000454542 PAPPA2Q9BXP8 1791 aa17.45■□□□□ 0.38
HDAC4-205ENST00000454542 TMEM88BA6NKF7 163 aa17.45■□□□□ 0.38
HDAC4-205ENST00000454542 HTRA3P83110 453 aa17.45■□□□□ 0.38
HDAC4-205ENST00000454542 DLGAP5Q15398 846 aa17.45■□□□□ 0.38
HDAC4-205ENST00000454542 DNAJC5GQ8N7S2 189 aa17.45■□□□□ 0.38
HDAC4-205ENST00000454542 RHPN1Q8TCX5 695 aa17.45■□□□□ 0.38
HDAC4-205ENST00000454542 DCPSQ96C86 337 aaKnown RBP17.45■□□□□ 0.38
HDAC4-205ENST00000454542 EAF2Q96CJ1 260 aaPredicted RBP17.45■□□□□ 0.38
HDAC4-205ENST00000454542 ZNF512BQ96KM6 892 aaPredicted RBP17.45■□□□□ 0.38
HDAC4-205ENST00000454542 MRIQ9BWK5 157 aa17.45■□□□□ 0.38
HDAC4-205ENST00000454542 DOCK2Q92608 1830 aa17.44■□□□□ 0.38
HDAC4-205ENST00000454542 PRDX5P30044 214 aa17.44■□□□□ 0.38
HDAC4-205ENST00000454542 CRKP46108 304 aa17.44■□□□□ 0.38
HDAC4-205ENST00000454542 CST9Q5W186 159 aa17.44■□□□□ 0.38
HDAC4-205ENST00000454542 USP48Q86UV5 1035 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms