RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 PAPPA2Q9BXP8 1791 aa17.73■□□□□ 0.43
RFTN1-207ENST00000453536 SSC5DA1L4H1 1573 aa17.72■□□□□ 0.43
RFTN1-207ENST00000453536 COL1A1P02452 1464 aaPredicted RBP17.72■□□□□ 0.43
RFTN1-207ENST00000453536 IL1R1P14778 569 aa17.72■□□□□ 0.43
RFTN1-207ENST00000453536 ZBED3Q96IU2 234 aaPredicted RBP17.72■□□□□ 0.43
RFTN1-207ENST00000453536 FAM84BQ96KN1 310 aaPredicted RBP17.72■□□□□ 0.43
RFTN1-207ENST00000453536 PA2G4Q9UQ80 394 aaKnown RBP17.72■□□□□ 0.43
RFTN1-207ENST00000453536 LRRFIP2Q9Y608 721 aaKnown RBP17.72■□□□□ 0.43
RFTN1-207ENST00000453536 OTOFQ9HC10 1997 aa17.71■□□□□ 0.43
RFTN1-207ENST00000453536 CLRN2A0PK11 232 aa17.71■□□□□ 0.43
RFTN1-207ENST00000453536 HNRNPUQ00839 825 aaKnown RBP eCLIP17.71■□□□□ 0.43
RFTN1-207ENST00000453536 PRKG1Q13976 671 aa17.71■□□□□ 0.43
RFTN1-207ENST00000453536 SIL1Q9H173 461 aa17.71■□□□□ 0.43
RFTN1-207ENST00000453536 METTL24Q5JXM2 366 aa17.7■□□□□ 0.42
RFTN1-207ENST00000453536 ZNF804AQ7Z570 1209 aa17.7■□□□□ 0.42
RFTN1-207ENST00000453536 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.7■□□□□ 0.42
RFTN1-207ENST00000453536 AKAP11Q9UKA4 1901 aa17.69■□□□□ 0.42
RFTN1-207ENST00000453536 UBE2Q2LH0YL09 131 aa17.69■□□□□ 0.42
RFTN1-207ENST00000453536 ECE1P42892 770 aa17.69■□□□□ 0.42
RFTN1-207ENST00000453536 BCAMP50895 628 aa17.69■□□□□ 0.42
RFTN1-207ENST00000453536 PTPN12Q05209 780 aaKnown RBP17.69■□□□□ 0.42
RFTN1-207ENST00000453536 CHAF1AQ13111 956 aaPredicted RBP17.69■□□□□ 0.42
RFTN1-207ENST00000453536 ATG9AQ7Z3C6 839 aa17.69■□□□□ 0.42
RFTN1-207ENST00000453536 CDAN1Q8IWY9 1227 aa17.69■□□□□ 0.42
RFTN1-207ENST00000453536 TDRD7Q8NHU6 1098 aaKnown RBP17.69■□□□□ 0.42
RFTN1-207ENST00000453536 CLUAP1Q96AJ1 413 aa17.69■□□□□ 0.42
RFTN1-207ENST00000453536 AIDAQ96BJ3 306 aa17.69■□□□□ 0.42
RFTN1-207ENST00000453536 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.69■□□□□ 0.42
RFTN1-207ENST00000453536 MYO3BQ8WXR4 1341 aa17.69■□□□□ 0.42
RFTN1-207ENST00000453536 CTCFP49711 727 aaPredicted RBP17.68■□□□□ 0.42
RFTN1-207ENST00000453536 CFAP100Q494V2 611 aa17.68■□□□□ 0.42
RFTN1-207ENST00000453536 RGMBQ6NW40 437 aa17.68■□□□□ 0.42
RFTN1-207ENST00000453536 PRMT6Q96LA8 375 aaPredicted RBP17.68■□□□□ 0.42
RFTN1-207ENST00000453536 UBTFL1P0CB47 393 aaPredicted RBP17.67■□□□□ 0.42
RFTN1-207ENST00000453536 TRIM27P14373 513 aa17.67■□□□□ 0.42
RFTN1-207ENST00000453536 ZNF157P51786 506 aaPredicted RBP17.67■□□□□ 0.42
RFTN1-207ENST00000453536 MKRN3Q13064 507 aaKnown RBP17.67■□□□□ 0.42
RFTN1-207ENST00000453536 UBE4AQ14139 1066 aa17.67■□□□□ 0.42
RFTN1-207ENST00000453536 OGFOD1Q8N543 542 aa17.67■□□□□ 0.42
RFTN1-207ENST00000453536 C2orf69Q8N8R5 385 aa17.67■□□□□ 0.42
RFTN1-207ENST00000453536 FRAT1Q92837 279 aaPredicted RBP17.67■□□□□ 0.42
RFTN1-207ENST00000453536 MROH5Q6ZUA9 1318 aa17.67■□□□□ 0.42
RFTN1-207ENST00000453536 PITPNM2Q9BZ72 1349 aa17.67■□□□□ 0.42
RFTN1-207ENST00000453536 FGFR2P21802 821 aa17.66■□□□□ 0.42
RFTN1-207ENST00000453536 HIBADHP31937 336 aaKnown RBP17.66■□□□□ 0.42
RFTN1-207ENST00000453536 KIF23Q02241 960 aaPredicted RBP17.66■□□□□ 0.42
RFTN1-207ENST00000453536 MFSD14BQ5SR56 506 aa17.66■□□□□ 0.42
RFTN1-207ENST00000453536 FBXO33Q7Z6M2 555 aa17.66■□□□□ 0.42
RFTN1-207ENST00000453536 RASAL3Q86YV0 1011 aa17.66■□□□□ 0.42
RFTN1-207ENST00000453536 FAM205AQ6ZU69 1335 aa17.66■□□□□ 0.42
RFTN1-207ENST00000453536 EYA2O00167 538 aa17.65■□□□□ 0.42
RFTN1-207ENST00000453536 PDE8BO95263 885 aa17.65■□□□□ 0.42
RFTN1-207ENST00000453536 SLC10A3P09131 477 aa17.65■□□□□ 0.42
RFTN1-207ENST00000453536 BRPF1P55201 1214 aaPredicted RBP17.65■□□□□ 0.42
RFTN1-207ENST00000453536 MAP2K1Q02750 393 aaPredicted RBP17.65■□□□□ 0.42
RFTN1-207ENST00000453536 HHIPL1Q96JK4 782 aa17.65■□□□□ 0.42
RFTN1-207ENST00000453536 API5Q9BZZ5 524 aaKnown RBP17.65■□□□□ 0.42
RFTN1-207ENST00000453536 SPDYE2BA6NHP3 402 aa17.64■□□□□ 0.41
RFTN1-207ENST00000453536 CT47B1P0C2W7 299 aaPredicted RBP17.64■□□□□ 0.41
RFTN1-207ENST00000453536 SPDYE6P0CI01 402 aa17.64■□□□□ 0.41
RFTN1-207ENST00000453536 ADORA1P30542 326 aa17.64■□□□□ 0.41
RFTN1-207ENST00000453536 DLGAP5Q15398 846 aa17.64■□□□□ 0.41
RFTN1-207ENST00000453536 VEZTQ9HBM0 779 aa17.64■□□□□ 0.41
RFTN1-207ENST00000453536 TTF2Q9UNY4 1162 aaKnown RBP17.64■□□□□ 0.41
RFTN1-207ENST00000453536 MAP2K2P36507 400 aa17.63■□□□□ 0.41
RFTN1-207ENST00000453536 RBM5P52756 815 aaKnown RBP eCLIP17.63■□□□□ 0.41
RFTN1-207ENST00000453536 CACNB3P54284 484 aa17.63■□□□□ 0.41
RFTN1-207ENST00000453536 TTLL12Q14166 644 aaPredicted RBP17.63■□□□□ 0.41
RFTN1-207ENST00000453536 TDRD3Q9H7E2 651 aaKnown RBP17.63■□□□□ 0.41
RFTN1-207ENST00000453536 HDAC9Q9UKV0 1011 aa17.63■□□□□ 0.41
RFTN1-207ENST00000453536 INTS3Q68E01 1043 aaKnown RBP17.62■□□□□ 0.41
RFTN1-207ENST00000453536 PRDM10Q9NQV6 1147 aa17.62■□□□□ 0.41
RFTN1-207ENST00000453536 RLBP1P12271 317 aa17.61■□□□□ 0.41
RFTN1-207ENST00000453536 NOGQ13253 232 aa17.61■□□□□ 0.41
RFTN1-207ENST00000453536 NBPF12Q5TAG4 269 aaPredicted RBP17.61■□□□□ 0.41
RFTN1-207ENST00000453536 TMEM57Q8N5G2 664 aa17.61■□□□□ 0.41
RFTN1-207ENST00000453536 CLMNQ96JQ2 1002 aa17.61■□□□□ 0.41
RFTN1-207ENST00000453536 DEFB129Q9H1M3 183 aa17.61■□□□□ 0.41
RFTN1-207ENST00000453536 C1orf115Q9H7X2 142 aa17.61■□□□□ 0.41
RFTN1-207ENST00000453536 KIF16BQ96L93 1317 aa17.61■□□□□ 0.41
RFTN1-207ENST00000453536 PUM3Q15397 648 aaKnown RBP17.6■□□□□ 0.41
RFTN1-207ENST00000453536 MTMR14Q8NCE2 650 aa17.6■□□□□ 0.41
RFTN1-207ENST00000453536 CSRNP1Q96S65 589 aa17.6■□□□□ 0.41
RFTN1-207ENST00000453536 MYO5AQ9Y4I1 1855 aaKnown RBP17.6■□□□□ 0.41
RFTN1-207ENST00000453536 PNMA6EA0A0J9YXQ4 647 aa17.59■□□□□ 0.41
RFTN1-207ENST00000453536 PHKA1P46020 1223 aa17.59■□□□□ 0.41
RFTN1-207ENST00000453536 CRKP46108 304 aa17.59■□□□□ 0.41
RFTN1-207ENST00000453536 FKBP1AP62942 108 aaKnown RBP17.59■□□□□ 0.41
RFTN1-207ENST00000453536 ATF7IPQ6VMQ6 1270 aa17.59■□□□□ 0.41
RFTN1-207ENST00000453536 VPS37DQ86XT2 251 aa17.59■□□□□ 0.41
RFTN1-207ENST00000453536 APOBEC3FQ8IUX4 373 aaKnown RBP17.59■□□□□ 0.41
RFTN1-207ENST00000453536 ZNF70Q9UC06 446 aaPredicted RBP17.59■□□□□ 0.41
RFTN1-207ENST00000453536 ANGEL1Q9UNK9 670 aaKnown RBP17.59■□□□□ 0.41
RFTN1-207ENST00000453536 MYH2Q9UKX2 1941 aa17.59■□□□□ 0.41
RFTN1-207ENST00000453536 TCP10L2B9ZVM9 353 aa17.58■□□□□ 0.4
RFTN1-207ENST00000453536 TRPA1O75762 1119 aa17.58■□□□□ 0.4
RFTN1-207ENST00000453536 ATP2B3Q16720 1220 aa17.58■□□□□ 0.4
RFTN1-207ENST00000453536 DZIP1LQ8IYY4 767 aaKnown RBP17.58■□□□□ 0.4
RFTN1-207ENST00000453536 BEGAINQ9BUH8 593 aa17.58■□□□□ 0.4
RFTN1-207ENST00000453536 RNF186Q9NXI6 227 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms