RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 IGSF3O75054 1194 aa15.15■□□□□ 0.02
HLA-DPA1-244ENST00000453337 IL1R1P14778 569 aa15.15■□□□□ 0.02
HLA-DPA1-244ENST00000453337 SLC51AQ86UW1 340 aa15.15■□□□□ 0.02
HLA-DPA1-244ENST00000453337 VPS33BQ9H267 617 aa15.15■□□□□ 0.02
HLA-DPA1-244ENST00000453337 ANTXR1Q9H6X2 564 aa15.15■□□□□ 0.02
HLA-DPA1-244ENST00000453337 CD209Q9NNX6 404 aa15.15■□□□□ 0.02
HLA-DPA1-244ENST00000453337 MYO5AQ9Y4I1 1855 aaKnown RBP15.14■□□□□ 0.01
HLA-DPA1-244ENST00000453337 SOCS7O14512 581 aa15.14■□□□□ 0.01
HLA-DPA1-244ENST00000453337 RIMBP2O15034 1052 aa15.14■□□□□ 0.01
HLA-DPA1-244ENST00000453337 REC8O95072 547 aa15.14■□□□□ 0.01
HLA-DPA1-244ENST00000453337 MAP3K12Q12852 859 aa15.14■□□□□ 0.01
HLA-DPA1-244ENST00000453337 PI16Q6UXB8 463 aa15.14■□□□□ 0.01
HLA-DPA1-244ENST00000453337 ZGPATQ8N5A5 531 aaKnown RBP15.14■□□□□ 0.01
HLA-DPA1-244ENST00000453337 WDR66Q8TBY9 1149 aa15.14■□□□□ 0.01
HLA-DPA1-244ENST00000453337 GPR101Q96P66 508 aaPredicted RBP15.14■□□□□ 0.01
HLA-DPA1-244ENST00000453337 PSMD1Q99460 953 aa15.14■□□□□ 0.01
HLA-DPA1-244ENST00000453337 ESYT1Q9BSJ8 1104 aa15.14■□□□□ 0.01
HLA-DPA1-244ENST00000453337 IQSEC3Q9UPP2 1182 aaPredicted RBP15.14■□□□□ 0.01
HLA-DPA1-244ENST00000453337 RNF113AO15541 343 aaKnown RBP15.13■□□□□ 0.01
HLA-DPA1-244ENST00000453337 SPTY2D1Q68D10 685 aaPredicted RBP15.13■□□□□ 0.01
HLA-DPA1-244ENST00000453337 CWC27Q6UX04 472 aaKnown RBP15.13■□□□□ 0.01
HLA-DPA1-244ENST00000453337 LRP2BPQ9P2M1 347 aa15.13■□□□□ 0.01
HLA-DPA1-244ENST00000453337 IDH1O75874 414 aaKnown RBP15.12■□□□□ 0.01
HLA-DPA1-244ENST00000453337 SEC24BO95487 1268 aa15.12■□□□□ 0.01
HLA-DPA1-244ENST00000453337 TMED8Q6PL24 325 aaPredicted RBP15.12■□□□□ 0.01
HLA-DPA1-244ENST00000453337 PODNQ7Z5L7 613 aa15.12■□□□□ 0.01
HLA-DPA1-244ENST00000453337 PIH1D3Q9NQM4 214 aaKnown RBP15.12■□□□□ 0.01
HLA-DPA1-244ENST00000453337 HELLSQ9NRZ9 838 aa15.12■□□□□ 0.01
HLA-DPA1-244ENST00000453337 BCS1LQ9Y276 419 aa15.12■□□□□ 0.01
HLA-DPA1-244ENST00000453337 CCDC88AQ3V6T2 1871 aa15.12■□□□□ 0.01
HLA-DPA1-244ENST00000453337 SGSM2O43147 1006 aa15.11■□□□□ 0.01
HLA-DPA1-244ENST00000453337 MFAP1P55081 439 aaKnown RBP15.11■□□□□ 0.01
HLA-DPA1-244ENST00000453337 KIAA2012Q0VF49 1180 aa15.11■□□□□ 0.01
HLA-DPA1-244ENST00000453337 CHAF1AQ13111 956 aaPredicted RBP15.11■□□□□ 0.01
HLA-DPA1-244ENST00000453337 NMIQ13287 307 aaPredicted RBP15.11■□□□□ 0.01
HLA-DPA1-244ENST00000453337 MCMDC2Q4G0Z9 681 aa15.11■□□□□ 0.01
HLA-DPA1-244ENST00000453337 SLC9C2Q5TAH2 1124 aa15.11■□□□□ 0.01
HLA-DPA1-244ENST00000453337 KIAA1211Q6ZU35 1233 aa15.11■□□□□ 0.01
HLA-DPA1-244ENST00000453337 ERICH6Q7L0X2 663 aa15.11■□□□□ 0.01
HLA-DPA1-244ENST00000453337 TBC1D22AQ8WUA7 517 aa15.11■□□□□ 0.01
HLA-DPA1-244ENST00000453337 FHDC1Q9C0D6 1143 aaPredicted RBP15.11■□□□□ 0.01
HLA-DPA1-244ENST00000453337 ABCF2Q9UG63 623 aa15.11■□□□□ 0.01
HLA-DPA1-244ENST00000453337 RAD50Q92878 1312 aa15.11■□□□□ 0.01
HLA-DPA1-244ENST00000453337 DUOX1Q9NRD9 1551 aa15.11■□□□□ 0.01
HLA-DPA1-244ENST00000453337 DOCK2Q92608 1830 aa15.1■□□□□ 0.01
HLA-DPA1-244ENST00000453337 ARFGEF1Q9Y6D6 1849 aa15.1■□□□□ 0.01
HLA-DPA1-244ENST00000453337 SNED1Q8TER0 1413 aa15.1■□□□□ 0.01
HLA-DPA1-244ENST00000453337 EPB41L2O43491 1005 aaKnown RBP15.1■□□□□ 0.01
HLA-DPA1-244ENST00000453337 UBE3CQ15386 1083 aa15.1■□□□□ 0.01
HLA-DPA1-244ENST00000453337 ZMYM1Q5SVZ6 1142 aa15.1■□□□□ 0.01
HLA-DPA1-244ENST00000453337 NLGN2Q8NFZ4 835 aa15.1■□□□□ 0.01
HLA-DPA1-244ENST00000453337 TSHZ2Q9NRE2 1034 aa15.1■□□□□ 0.01
HLA-DPA1-244ENST00000453337 FAM205AQ6ZU69 1335 aa15.1■□□□□ 0.01
HLA-DPA1-244ENST00000453337 SALL1Q9NSC2 1324 aa15.1■□□□□ 0.01
HLA-DPA1-244ENST00000453337 FER1L6Q2WGJ9 1857 aa15.1■□□□□ 0.01
HLA-DPA1-244ENST00000453337 PPIP5K2O43314 1243 aa15.09■□□□□ 0.01
HLA-DPA1-244ENST00000453337 ADD2P35612 726 aa15.09■□□□□ 0.01
HLA-DPA1-244ENST00000453337 DOK7Q18PE1 504 aa15.09■□□□□ 0.01
HLA-DPA1-244ENST00000453337 APPBP2Q92624 585 aa15.09■□□□□ 0.01
HLA-DPA1-244ENST00000453337 FAM227BQ96M60 508 aa15.09■□□□□ 0.01
HLA-DPA1-244ENST00000453337 SYT17Q9BSW7 474 aa15.09■□□□□ 0.01
HLA-DPA1-244ENST00000453337 RAI14Q9P0K7 980 aa15.09■□□□□ 0.01
HLA-DPA1-244ENST00000453337 PDE6AP16499 860 aa15.08■□□□□ 0
HLA-DPA1-244ENST00000453337 AOC3Q16853 763 aa15.08■□□□□ 0
HLA-DPA1-244ENST00000453337 TTLL5Q6EMB2 1281 aa15.08■□□□□ 0
HLA-DPA1-244ENST00000453337 USP26Q9BXU7 913 aa15.08■□□□□ 0
HLA-DPA1-244ENST00000453337 SUGT1Q9Y2Z0 365 aa15.08■□□□□ 0
HLA-DPA1-244ENST00000453337 A0A0D9SFI3 127 aa15.07■□□□□ 0
HLA-DPA1-244ENST00000453337 LDHBP07195 334 aaKnown RBP15.07■□□□□ 0
HLA-DPA1-244ENST00000453337 GTF2IP78347 998 aa15.07■□□□□ 0
HLA-DPA1-244ENST00000453337 LARGE2Q8N3Y3 721 aa15.07■□□□□ 0
HLA-DPA1-244ENST00000453337 MAGEB6Q8N7X4 407 aa15.07■□□□□ 0
HLA-DPA1-244ENST00000453337 TAOK3Q9H2K8 898 aa15.07■□□□□ 0
HLA-DPA1-244ENST00000453337 WWC3Q9ULE0 1092 aa15.07■□□□□ 0
HLA-DPA1-244ENST00000453337 ECE2O60344 883 aa15.06■□□□□ 0
HLA-DPA1-244ENST00000453337 LDHCP07864 332 aa15.06■□□□□ 0
HLA-DPA1-244ENST00000453337 IARSP41252 1262 aaKnown RBP15.06■□□□□ 0
HLA-DPA1-244ENST00000453337 FKBP1AP62942 108 aaKnown RBP15.06■□□□□ 0
HLA-DPA1-244ENST00000453337 GSTO1P78417 241 aa15.06■□□□□ 0
HLA-DPA1-244ENST00000453337 NAA16Q6N069 864 aaPredicted RBP15.06■□□□□ 0
HLA-DPA1-244ENST00000453337 OSBP2Q969R2 916 aa15.06■□□□□ 0
HLA-DPA1-244ENST00000453337 C22orf23Q9BZE7 217 aa15.06■□□□□ 0
HLA-DPA1-244ENST00000453337 DBNDD1Q9H9R9 158 aa15.06■□□□□ 0
HLA-DPA1-244ENST00000453337 ANO2Q9NQ90 1003 aa15.06■□□□□ 0
HLA-DPA1-244ENST00000453337 ZNF277Q9NRM2 450 aaPredicted RBP15.06■□□□□ 0
HLA-DPA1-244ENST00000453337 ZNF532Q9HCE3 1301 aa15.06■□□□□ 0
HLA-DPA1-244ENST00000453337 LTBP3Q9NS15 1303 aa15.06■□□□□ 0
HLA-DPA1-244ENST00000453337 COL1A1P02452 1464 aaPredicted RBP15.06■□□□□ 0
HLA-DPA1-244ENST00000453337 TCRBV5S4A2TA0A5A2 114 aa15.05■□□□□ -0
HLA-DPA1-244ENST00000453337 USP17L3A6NCW0 530 aa15.05■□□□□ -0
HLA-DPA1-244ENST00000453337 USP17L4A6NCW7 530 aa15.05■□□□□ -0
HLA-DPA1-244ENST00000453337 CYP7A1P22680 504 aa15.05■□□□□ -0
HLA-DPA1-244ENST00000453337 MCCP23508 829 aa15.05■□□□□ -0
HLA-DPA1-244ENST00000453337 MFSD14BQ5SR56 506 aa15.05■□□□□ -0
HLA-DPA1-244ENST00000453337 STRIP1Q5VSL9 837 aa15.05■□□□□ -0
HLA-DPA1-244ENST00000453337 USP17L1Q7RTZ2 530 aa15.05■□□□□ -0
HLA-DPA1-244ENST00000453337 DZIP1Q86YF9 867 aaKnown RBP15.05■□□□□ -0
HLA-DPA1-244ENST00000453337 SLF2Q8IX21 1173 aa15.05■□□□□ -0
HLA-DPA1-244ENST00000453337 CCDC171Q6TFL3 1326 aa15.04■□□□□ -0
HLA-DPA1-244ENST00000453337 MECOMQ03112 1051 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms