RNA–Protein interactions for RNA: ENST00000451343.4

TNXB-203, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 3,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-203ENST00000451343 MMP14P50281 582 aa13.46□□□□□ -0.25
TNXB-203ENST00000451343 STX1AQ16623 288 aa13.46□□□□□ -0.25
TNXB-203ENST00000451343 AOPEPQ8N6M6 819 aa13.46□□□□□ -0.25
TNXB-203ENST00000451343 PLBD2Q8NHP8 589 aa13.46□□□□□ -0.25
TNXB-203ENST00000451343 ZNF330Q9Y3S2 320 aaPredicted RBP13.46□□□□□ -0.25
TNXB-203ENST00000451343 POLR3DP05423 398 aaPredicted RBP13.46□□□□□ -0.26
TNXB-203ENST00000451343 IFIT1P09914 478 aaKnown RBP13.46□□□□□ -0.26
TNXB-203ENST00000451343 FDPSP14324 419 aaKnown RBP13.46□□□□□ -0.26
TNXB-203ENST00000451343 ZMYM1Q5SVZ6 1142 aa13.46□□□□□ -0.26
TNXB-203ENST00000451343 NAA16Q6N069 864 aaPredicted RBP13.46□□□□□ -0.26
TNXB-203ENST00000451343 CHMP4CQ96CF2 233 aa13.46□□□□□ -0.26
TNXB-203ENST00000451343 CTIFO43310 598 aaKnown RBP13.45□□□□□ -0.26
TNXB-203ENST00000451343 DHX40Q8IX18 779 aaKnown RBP13.45□□□□□ -0.26
TNXB-203ENST00000451343 ANKRD7Q92527 254 aa13.45□□□□□ -0.26
TNXB-203ENST00000451343 OSBP2Q969R2 916 aa13.45□□□□□ -0.26
TNXB-203ENST00000451343 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.45□□□□□ -0.26
TNXB-203ENST00000451343 V9GYY5 206 aaPredicted RBP13.45□□□□□ -0.26
TNXB-203ENST00000451343 SPATA31A3Q5VYP0 1347 aa13.45□□□□□ -0.26
TNXB-203ENST00000451343 A0A1B0GUL7 405 aa13.45□□□□□ -0.26
TNXB-203ENST00000451343 ADORA1P30542 326 aa13.45□□□□□ -0.26
TNXB-203ENST00000451343 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.45□□□□□ -0.26
TNXB-203ENST00000451343 LRRC8AQ8IWT6 810 aa13.45□□□□□ -0.26
TNXB-203ENST00000451343 ENGASEQ8NFI3 743 aa13.45□□□□□ -0.26
TNXB-203ENST00000451343 ZNF622Q969S3 477 aaKnown RBP eCLIP13.45□□□□□ -0.26
TNXB-203ENST00000451343 DCAF5Q96JK2 942 aa13.45□□□□□ -0.26
TNXB-203ENST00000451343 LLPHQ9BRT6 129 aaKnown RBP13.45□□□□□ -0.26
TNXB-203ENST00000451343 SCN11AQ9UI33 1791 aa13.45□□□□□ -0.26
TNXB-203ENST00000451343 LAMA4Q16363 1823 aa13.45□□□□□ -0.26
TNXB-203ENST00000451343 ADAMTS7Q9UKP4 1686 aa13.44□□□□□ -0.26
TNXB-203ENST00000451343 CAMTA1Q9Y6Y1 1673 aa13.44□□□□□ -0.26
TNXB-203ENST00000451343 PI16Q6UXB8 463 aa13.44□□□□□ -0.26
TNXB-203ENST00000451343 PCDHA7Q9UN72 937 aa13.44□□□□□ -0.26
TNXB-203ENST00000451343 A0A0G2JS52 829 aa13.44□□□□□ -0.26
TNXB-203ENST00000451343 BIN1O00499 593 aa13.44□□□□□ -0.26
TNXB-203ENST00000451343 ZSCAN20P17040 1043 aaPredicted RBP13.44□□□□□ -0.26
TNXB-203ENST00000451343 SYTL4Q96C24 671 aaPredicted RBP13.44□□□□□ -0.26
TNXB-203ENST00000451343 DSCC1Q9BVC3 393 aa13.44□□□□□ -0.26
TNXB-203ENST00000451343 CARMIL3Q8ND23 1372 aa13.44□□□□□ -0.26
TNXB-203ENST00000451343 H7C1W4 665 aa13.44□□□□□ -0.26
TNXB-203ENST00000451343 EVA1CP58658 441 aa13.44□□□□□ -0.26
TNXB-203ENST00000451343 FAM160A1Q05DH4 1040 aa13.44□□□□□ -0.26
TNXB-203ENST00000451343 WASHC4Q2M389 1173 aa13.44□□□□□ -0.26
TNXB-203ENST00000451343 HELLSQ9NRZ9 838 aa13.44□□□□□ -0.26
TNXB-203ENST00000451343 CLIC4Q9Y696 253 aa13.44□□□□□ -0.26
TNXB-203ENST00000451343 SALL1Q9NSC2 1324 aa13.43□□□□□ -0.26
TNXB-203ENST00000451343 RFX7Q2KHR2 1363 aa13.43□□□□□ -0.26
TNXB-203ENST00000451343 PALLDQ8WX93 1383 aa13.43□□□□□ -0.26
TNXB-203ENST00000451343 CCDC69A6NI79 296 aa13.43□□□□□ -0.26
TNXB-203ENST00000451343 RNF113AO15541 343 aaKnown RBP13.43□□□□□ -0.26
TNXB-203ENST00000451343 HMGB1P09429 215 aaKnown RBP13.43□□□□□ -0.26
TNXB-203ENST00000451343 SKILP12757 684 aa13.43□□□□□ -0.26
TNXB-203ENST00000451343 PSEN1P49768 467 aa13.43□□□□□ -0.26
TNXB-203ENST00000451343 SCARF1Q14162 830 aa13.43□□□□□ -0.26
TNXB-203ENST00000451343 SDF4Q9BRK5 362 aa13.43□□□□□ -0.26
TNXB-203ENST00000451343 CWC25Q9NXE8 425 aaPredicted RBP13.43□□□□□ -0.26
TNXB-203ENST00000451343 ARFGEF2Q9Y6D5 1785 aa13.43□□□□□ -0.26
TNXB-203ENST00000451343 SMTNL1A8MU46 457 aa13.43□□□□□ -0.26
TNXB-203ENST00000451343 NDUFA8P51970 172 aa13.43□□□□□ -0.26
TNXB-203ENST00000451343 ISM2Q6H9L7 571 aa13.43□□□□□ -0.26
TNXB-203ENST00000451343 ZNF396Q96N95 335 aaPredicted RBP13.43□□□□□ -0.26
TNXB-203ENST00000451343 DENND2AQ9ULE3 1009 aa13.43□□□□□ -0.26
TNXB-203ENST00000451343 EYA2O00167 538 aa13.42□□□□□ -0.26
TNXB-203ENST00000451343 CCDC112Q8NEF3 446 aa13.42□□□□□ -0.26
TNXB-203ENST00000451343 TRPM3Q9HCF6 1732 aaPredicted RBP13.42□□□□□ -0.26
TNXB-203ENST00000451343 FOXP2O15409 715 aa13.42□□□□□ -0.26
TNXB-203ENST00000451343 CLSTN1O94985 981 aa13.42□□□□□ -0.26
TNXB-203ENST00000451343 DPCR1Q3MIW9 517 aa13.42□□□□□ -0.26
TNXB-203ENST00000451343 CEP135Q66GS9 1140 aa13.42□□□□□ -0.26
TNXB-203ENST00000451343 AGXT2Q9BYV1 514 aa13.42□□□□□ -0.26
TNXB-203ENST00000451343 IL15P40933 162 aaPredicted RBP13.42□□□□□ -0.26
TNXB-203ENST00000451343 KLF18A0A0U1RQI7 1052 aa13.41□□□□□ -0.26
TNXB-203ENST00000451343 CCZ1BP86790 482 aa13.41□□□□□ -0.26
TNXB-203ENST00000451343 CCZ1P86791 482 aaPredicted RBP13.41□□□□□ -0.26
TNXB-203ENST00000451343 SF3A1Q15459 793 aaKnown RBP13.41□□□□□ -0.26
TNXB-203ENST00000451343 SARM1Q6SZW1 724 aa13.41□□□□□ -0.26
TNXB-203ENST00000451343 CEP57L1Q8IYX8 460 aa13.41□□□□□ -0.26
TNXB-203ENST00000451343 FMR1NBQ8N0W7 255 aaPredicted RBP13.41□□□□□ -0.26
TNXB-203ENST00000451343 NKX2-3Q8TAU0 364 aa13.41□□□□□ -0.26
TNXB-203ENST00000451343 MRPS27Q92552 414 aaKnown RBP13.41□□□□□ -0.26
TNXB-203ENST00000451343 MRFAP1L1Q96HT8 127 aa13.41□□□□□ -0.26
TNXB-203ENST00000451343 ANO10Q9NW15 660 aa13.41□□□□□ -0.26
TNXB-203ENST00000451343 GOLGA8BA8MQT2 603 aa13.41□□□□□ -0.26
TNXB-203ENST00000451343 CTAGE5O15320 804 aa13.41□□□□□ -0.26
TNXB-203ENST00000451343 CDC25BP30305 580 aa13.41□□□□□ -0.26
TNXB-203ENST00000451343 STK38Q15208 465 aa13.41□□□□□ -0.26
TNXB-203ENST00000451343 GORABQ5T7V8 394 aa13.41□□□□□ -0.26
TNXB-203ENST00000451343 AIFM3Q96NN9 605 aa13.41□□□□□ -0.26
TNXB-203ENST00000451343 KIF28PB7ZC32 967 aa13.4□□□□□ -0.26
TNXB-203ENST00000451343 RXRAP19793 462 aa13.4□□□□□ -0.26
TNXB-203ENST00000451343 PRC1O43663 620 aa13.4□□□□□ -0.26
TNXB-203ENST00000451343 C8orf76Q96K31 380 aa13.4□□□□□ -0.26
TNXB-203ENST00000451343 TNS3Q68CZ2 1445 aa13.4□□□□□ -0.26
TNXB-203ENST00000451343 ZNF274Q96GC6 653 aaPredicted RBP13.39□□□□□ -0.27
TNXB-203ENST00000451343 PUS7LQ9H0K6 701 aaKnown RBP13.39□□□□□ -0.27
TNXB-203ENST00000451343 ORC3Q9UBD5 711 aaPredicted RBP13.39□□□□□ -0.27
TNXB-203ENST00000451343 NPHP1O15259 732 aa13.39□□□□□ -0.27
TNXB-203ENST00000451343 SMC2O95347 1197 aa13.39□□□□□ -0.27
TNXB-203ENST00000451343 FGAP02671 866 aa13.39□□□□□ -0.27
TNXB-203ENST00000451343 PTPN21Q16825 1174 aa13.39□□□□□ -0.27
TNXB-203ENST00000451343 TTC39AQ5SRH9 613 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms