RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 AGGF1Q8N302 714 aaeCLIP7.97□□□□□ -1.13
GTF3C3-207ENST00000451088 FOXD4L4Q8WXT5 416 aaPredicted RBP7.97□□□□□ -1.13
GTF3C3-207ENST00000451088 SOWAHDA6NJG2 315 aa7.96□□□□□ -1.14
GTF3C3-207ENST00000451088 DDX3YO15523 660 aaKnown RBP7.96□□□□□ -1.14
GTF3C3-207ENST00000451088 KIAA1211Q6ZU35 1233 aa7.96□□□□□ -1.14
GTF3C3-207ENST00000451088 NESP48681 1621 aa7.96□□□□□ -1.14
GTF3C3-207ENST00000451088 POLR3DP05423 398 aaPredicted RBP7.95□□□□□ -1.14
GTF3C3-207ENST00000451088 NEFLP07196 543 aa7.95□□□□□ -1.14
GTF3C3-207ENST00000451088 PRR23CQ6ZRP0 262 aa7.95□□□□□ -1.14
GTF3C3-207ENST00000451088 ACAD11Q709F0 780 aa7.95□□□□□ -1.14
GTF3C3-207ENST00000451088 SOX1O00570 391 aaPredicted RBP7.94□□□□□ -1.14
GTF3C3-207ENST00000451088 DUOXA2Q1HG44 320 aa7.94□□□□□ -1.14
GTF3C3-207ENST00000451088 USPL1Q5W0Q7 1092 aa7.94□□□□□ -1.14
GTF3C3-207ENST00000451088 UBASH3BQ8TF42 649 aa7.94□□□□□ -1.14
GTF3C3-207ENST00000451088 UBL7Q96S82 380 aaPredicted RBP7.94□□□□□ -1.14
GTF3C3-207ENST00000451088 RBCK1Q9BYM8 510 aa7.94□□□□□ -1.14
GTF3C3-207ENST00000451088 SOX17Q9H6I2 414 aaPredicted RBP7.94□□□□□ -1.14
GTF3C3-207ENST00000451088 A0A1W2PP55 124 aa7.93□□□□□ -1.14
GTF3C3-207ENST00000451088 GPR182O15218 404 aa7.93□□□□□ -1.14
GTF3C3-207ENST00000451088 GLB1P16278 677 aa7.93□□□□□ -1.14
GTF3C3-207ENST00000451088 C19orf57Q0VDD7 668 aa7.93□□□□□ -1.14
GTF3C3-207ENST00000451088 ZMYM1Q5SVZ6 1142 aa7.93□□□□□ -1.14
GTF3C3-207ENST00000451088 HGSNATQ68CP4 663 aa7.93□□□□□ -1.14
GTF3C3-207ENST00000451088 CCNJLQ8IV13 435 aa7.93□□□□□ -1.14
GTF3C3-207ENST00000451088 ALKBH8Q96BT7 664 aaKnown RBP7.93□□□□□ -1.14
GTF3C3-207ENST00000451088 TCF12Q99081 682 aa7.93□□□□□ -1.14
GTF3C3-207ENST00000451088 DCAF1Q9Y4B6 1507 aa7.93□□□□□ -1.14
GTF3C3-207ENST00000451088 CPNE3O75131 537 aaKnown RBP7.92□□□□□ -1.14
GTF3C3-207ENST00000451088 ARL4DP49703 201 aa7.92□□□□□ -1.14
GTF3C3-207ENST00000451088 ORC1Q13415 861 aa7.92□□□□□ -1.14
GTF3C3-207ENST00000451088 IKBKEQ14164 716 aa7.92□□□□□ -1.14
GTF3C3-207ENST00000451088 KIAA0319Q5VV43 1072 aa7.92□□□□□ -1.14
GTF3C3-207ENST00000451088 Q8N3U1 123 aa7.92□□□□□ -1.14
GTF3C3-207ENST00000451088 ASAP3Q8TDY4 903 aa7.92□□□□□ -1.14
GTF3C3-207ENST00000451088 SLC7A3Q8WY07 619 aa7.92□□□□□ -1.14
GTF3C3-207ENST00000451088 CEP41Q9BYV8 373 aa7.92□□□□□ -1.14
GTF3C3-207ENST00000451088 DNAJC25Q9H1X3 360 aa7.92□□□□□ -1.14
GTF3C3-207ENST00000451088 METTL12A8MUP2 240 aa7.91□□□□□ -1.14
GTF3C3-207ENST00000451088 ESRRAP11474 423 aaPredicted RBP7.91□□□□□ -1.14
GTF3C3-207ENST00000451088 UVSSAQ2YD98 709 aa7.91□□□□□ -1.14
GTF3C3-207ENST00000451088 FAM46AQ96IP4 442 aaKnown RBP7.91□□□□□ -1.14
GTF3C3-207ENST00000451088 DMRTB1Q96MA1 342 aa7.91□□□□□ -1.14
GTF3C3-207ENST00000451088 NCAPD3P42695 1498 aa7.91□□□□□ -1.14
GTF3C3-207ENST00000451088 ZCCHC6Q5VYS8 1495 aaKnown RBP7.9□□□□□ -1.14
GTF3C3-207ENST00000451088 GRIA4P48058 902 aa7.9□□□□□ -1.14
GTF3C3-207ENST00000451088 NLRP12P59046 1061 aa7.9□□□□□ -1.14
GTF3C3-207ENST00000451088 SLC51AQ86UW1 340 aa7.9□□□□□ -1.14
GTF3C3-207ENST00000451088 ARMC10Q8N2F6 343 aa7.9□□□□□ -1.14
GTF3C3-207ENST00000451088 NIF3L1Q9GZT8 377 aa7.9□□□□□ -1.14
GTF3C3-207ENST00000451088 LIN7BQ9HAP6 207 aa7.9□□□□□ -1.14
GTF3C3-207ENST00000451088 THOC2Q8NI27 1593 aaKnown RBP7.89□□□□□ -1.15
GTF3C3-207ENST00000451088 A0A096LPE4 126 aa7.89□□□□□ -1.15
GTF3C3-207ENST00000451088 A0A1W2PPZ6 126 aa7.89□□□□□ -1.15
GTF3C3-207ENST00000451088 MEGF11A6BM72 1044 aa7.89□□□□□ -1.15
GTF3C3-207ENST00000451088 EIF1AYO14602 144 aaKnown RBP7.89□□□□□ -1.15
GTF3C3-207ENST00000451088 TMC1Q8TDI8 760 aa7.89□□□□□ -1.15
GTF3C3-207ENST00000451088 RNF208Q9H0X6 261 aa7.89□□□□□ -1.15
GTF3C3-207ENST00000451088 NPHS2Q9NP85 383 aa7.89□□□□□ -1.15
GTF3C3-207ENST00000451088 XP32Q5T750 250 aa7.88□□□□□ -1.15
GTF3C3-207ENST00000451088 ANKRD34AQ69YU3 496 aa7.88□□□□□ -1.15
GTF3C3-207ENST00000451088 CCDC74AQ96AQ1 378 aa7.88□□□□□ -1.15
GTF3C3-207ENST00000451088 RUSC1Q9BVN2 902 aa7.88□□□□□ -1.15
GTF3C3-207ENST00000451088 CLEC4MQ9H2X3 399 aaPredicted RBP7.88□□□□□ -1.15
GTF3C3-207ENST00000451088 DCTN4Q9UJW0 460 aa7.88□□□□□ -1.15
GTF3C3-207ENST00000451088 RAXQ9Y2V3 346 aa7.88□□□□□ -1.15
GTF3C3-207ENST00000451088 DHX15O43143 795 aaKnown RBP7.87□□□□□ -1.15
GTF3C3-207ENST00000451088 EIF4EBP3O60516 100 aaPredicted RBP7.87□□□□□ -1.15
GTF3C3-207ENST00000451088 SPRED3Q2MJR0 410 aa7.87□□□□□ -1.15
GTF3C3-207ENST00000451088 TMC7Q7Z402 723 aa7.87□□□□□ -1.15
GTF3C3-207ENST00000451088 MYRFLQ96LU7 910 aa7.87□□□□□ -1.15
GTF3C3-207ENST00000451088 CSRNP1Q96S65 589 aa7.87□□□□□ -1.15
GTF3C3-207ENST00000451088 NRSN2Q9GZP1 204 aa7.87□□□□□ -1.15
GTF3C3-207ENST00000451088 FSTP19883 344 aa7.86□□□□□ -1.15
GTF3C3-207ENST00000451088 ITPKAP23677 461 aa7.86□□□□□ -1.15
GTF3C3-207ENST00000451088 PCDH1Q08174 1060 aa7.86□□□□□ -1.15
GTF3C3-207ENST00000451088 KCNA1Q09470 495 aa7.86□□□□□ -1.15
GTF3C3-207ENST00000451088 ZNF423Q2M1K9 1284 aa7.86□□□□□ -1.15
GTF3C3-207ENST00000451088 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.86□□□□□ -1.15
GTF3C3-207ENST00000451088 TMPRSS13Q9BYE2 586 aa7.86□□□□□ -1.15
GTF3C3-207ENST00000451088 EHD4Q9H223 541 aa7.86□□□□□ -1.15
GTF3C3-207ENST00000451088 BIN2Q9UBW5 565 aaPredicted RBP7.86□□□□□ -1.15
GTF3C3-207ENST00000451088 LOC100289279A0A1B0GTE1 492 aa7.85□□□□□ -1.15
GTF3C3-207ENST00000451088 DLGAP3O95886 979 aa7.85□□□□□ -1.15
GTF3C3-207ENST00000451088 PTPN12Q05209 780 aaKnown RBP7.85□□□□□ -1.15
GTF3C3-207ENST00000451088 DSC3Q14574 896 aa7.85□□□□□ -1.15
GTF3C3-207ENST00000451088 PRPF40BQ6NWY9 871 aaKnown RBP7.85□□□□□ -1.15
GTF3C3-207ENST00000451088 UTP4Q969X6 686 aaKnown RBP7.85□□□□□ -1.15
GTF3C3-207ENST00000451088 PREPP48147 710 aa7.84□□□□□ -1.15
GTF3C3-207ENST00000451088 GSTM4Q03013 218 aa7.84□□□□□ -1.15
GTF3C3-207ENST00000451088 ARTNQ5T4W7 220 aa7.84□□□□□ -1.15
GTF3C3-207ENST00000451088 SMG8Q8ND04 991 aaKnown RBP7.84□□□□□ -1.15
GTF3C3-207ENST00000451088 TRAIPQ9BWF2 469 aa7.84□□□□□ -1.15
GTF3C3-207ENST00000451088 USP26Q9BXU7 913 aa7.84□□□□□ -1.15
GTF3C3-207ENST00000451088 ZNF576Q9H609 170 aa7.84□□□□□ -1.15
GTF3C3-207ENST00000451088 SUGCTQ9HAC7 445 aa7.84□□□□□ -1.15
GTF3C3-207ENST00000451088 ABCB6Q9NP58 842 aa7.84□□□□□ -1.15
GTF3C3-207ENST00000451088 STOML1Q9UBI4 398 aa7.84□□□□□ -1.15
GTF3C3-207ENST00000451088 RNF112Q9ULX5 631 aa7.84□□□□□ -1.15
GTF3C3-207ENST00000451088 IVNS1ABPQ9Y6Y0 642 aa7.84□□□□□ -1.15
GTF3C3-207ENST00000451088 GSC2O15499 205 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms