RNA–Protein interactions for RNA: ENST00000449833.6

SHANK2-211, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 8,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-211ENST00000449833 ANKRD50Q9ULJ7 1429 aa13.04□□□□□ -0.32
SHANK2-211ENST00000449833 ARHGEF9O43307 516 aa13.04□□□□□ -0.32
SHANK2-211ENST00000449833 SAAL1Q96ER3 474 aa13.04□□□□□ -0.32
SHANK2-211ENST00000449833 VIMP08670 466 aaKnown RBP13.04□□□□□ -0.32
SHANK2-211ENST00000449833 INPP1P49441 399 aa13.04□□□□□ -0.32
SHANK2-211ENST00000449833 UTP14AQ9BVJ6 771 aaKnown RBP13.04□□□□□ -0.32
SHANK2-211ENST00000449833 DIABLOQ9NR28 239 aa13.04□□□□□ -0.32
SHANK2-211ENST00000449833 IDEP14735 1019 aa13.04□□□□□ -0.32
SHANK2-211ENST00000449833 SEPT2Q15019 361 aa13.04□□□□□ -0.32
SHANK2-211ENST00000449833 ALDH1L2Q3SY69 923 aa13.04□□□□□ -0.32
SHANK2-211ENST00000449833 N4BP2L2Q92802 583 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-211ENST00000449833 GDPD2Q9HCC8 539 aa13.04□□□□□ -0.32
SHANK2-211ENST00000449833 CTTNBP2NLQ9P2B4 639 aa13.04□□□□□ -0.32
SHANK2-211ENST00000449833 ZNF652Q9Y2D9 606 aa13.04□□□□□ -0.32
SHANK2-211ENST00000449833 HMGB2P26583 209 aaKnown RBP13.04□□□□□ -0.32
SHANK2-211ENST00000449833 VPS41P49754 854 aa13.04□□□□□ -0.32
SHANK2-211ENST00000449833 ZNF530Q6P9A1 599 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-211ENST00000449833 CCDC26Q8TAB7 109 aa13.04□□□□□ -0.32
SHANK2-211ENST00000449833 EVI5LQ96CN4 794 aa13.04□□□□□ -0.32
SHANK2-211ENST00000449833 RIPOR2Q9Y4F9 1068 aa13.04□□□□□ -0.32
SHANK2-211ENST00000449833 HELBQ8NG08 1087 aaPredicted RBP13.03□□□□□ -0.32
SHANK2-211ENST00000449833 PIK3R5Q8WYR1 880 aa13.03□□□□□ -0.32
SHANK2-211ENST00000449833 IWS1Q96ST2 819 aa13.03□□□□□ -0.32
SHANK2-211ENST00000449833 BOLA2Q9H3K6 86 aa13.03□□□□□ -0.32
SHANK2-211ENST00000449833 RAD50Q92878 1312 aa13.03□□□□□ -0.32
SHANK2-211ENST00000449833 PTGS1P23219 599 aa13.03□□□□□ -0.32
SHANK2-211ENST00000449833 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.03□□□□□ -0.32
SHANK2-211ENST00000449833 ZNF830Q96NB3 372 aaPredicted RBP13.03□□□□□ -0.32
SHANK2-211ENST00000449833 SMIM23A6NLE4 172 aa13.03□□□□□ -0.32
SHANK2-211ENST00000449833 CAPN7Q9Y6W3 813 aa13.03□□□□□ -0.32
SHANK2-211ENST00000449833 IFIT1P09914 478 aaKnown RBP13.03□□□□□ -0.32
SHANK2-211ENST00000449833 METAP2P50579 478 aaKnown RBP eCLIP13.03□□□□□ -0.32
SHANK2-211ENST00000449833 INF2Q27J81 1249 aa13.03□□□□□ -0.32
SHANK2-211ENST00000449833 GRAMD4Q6IC98 578 aa13.03□□□□□ -0.32
SHANK2-211ENST00000449833 ZNF692Q9BU19 519 aaPredicted RBP13.03□□□□□ -0.32
SHANK2-211ENST00000449833 GOLGA6BA6NDN3 693 aa13.03□□□□□ -0.32
SHANK2-211ENST00000449833 PSMA7O14818 248 aa13.03□□□□□ -0.32
SHANK2-211ENST00000449833 ZSCAN22P10073 491 aaPredicted RBP13.03□□□□□ -0.32
SHANK2-211ENST00000449833 RAP1GDS1P52306 607 aa13.03□□□□□ -0.32
SHANK2-211ENST00000449833 TRIM68Q6AZZ1 485 aa13.03□□□□□ -0.32
SHANK2-211ENST00000449833 CCDC25Q86WR0 208 aa13.03□□□□□ -0.32
SHANK2-211ENST00000449833 DUSP27Q5VZP5 1158 aa13.02□□□□□ -0.32
SHANK2-211ENST00000449833 PNMA8AQ86V59 439 aaPredicted RBP13.02□□□□□ -0.32
SHANK2-211ENST00000449833 ZNF354CQ86Y25 554 aa13.02□□□□□ -0.32
SHANK2-211ENST00000449833 IARSP41252 1262 aaKnown RBP13.02□□□□□ -0.32
SHANK2-211ENST00000449833 CCT6BQ92526 530 aa13.02□□□□□ -0.32
SHANK2-211ENST00000449833 PAWRQ96IZ0 340 aaKnown RBP13.02□□□□□ -0.32
SHANK2-211ENST00000449833 A0A1B0GW55 424 aa13.02□□□□□ -0.32
SHANK2-211ENST00000449833 CRCPO75575 148 aa13.02□□□□□ -0.32
SHANK2-211ENST00000449833 DUX4L2P0CJ85 424 aa13.02□□□□□ -0.32
SHANK2-211ENST00000449833 DUX4L3P0CJ86 424 aa13.02□□□□□ -0.32
SHANK2-211ENST00000449833 DUX4L4P0CJ87 422 aa13.02□□□□□ -0.32
SHANK2-211ENST00000449833 DUX4L5P0CJ88 424 aa13.02□□□□□ -0.32
SHANK2-211ENST00000449833 DUX4L6P0CJ89 424 aa13.02□□□□□ -0.32
SHANK2-211ENST00000449833 DUX4L7P0CJ90 424 aa13.02□□□□□ -0.32
SHANK2-211ENST00000449833 ICE2Q659A1 982 aa13.02□□□□□ -0.32
SHANK2-211ENST00000449833 IFT20Q8IY31 132 aa13.02□□□□□ -0.32
SHANK2-211ENST00000449833 ARMC2Q8NEN0 867 aa13.02□□□□□ -0.32
SHANK2-211ENST00000449833 DUX4Q9UBX2 424 aa13.02□□□□□ -0.32
SHANK2-211ENST00000449833 UTP11Q9Y3A2 253 aaKnown RBP13.02□□□□□ -0.32
SHANK2-211ENST00000449833 TACC3Q9Y6A5 838 aa13.02□□□□□ -0.32
SHANK2-211ENST00000449833 PHACTR2O75167 634 aa13.02□□□□□ -0.33
SHANK2-211ENST00000449833 HEATR3Q7Z4Q2 680 aa13.02□□□□□ -0.33
SHANK2-211ENST00000449833 RSPH3Q86UC2 560 aa13.02□□□□□ -0.33
SHANK2-211ENST00000449833 CCDC82Q8N4S0 544 aa13.02□□□□□ -0.33
SHANK2-211ENST00000449833 PPP1R12AO14974 1030 aaPredicted RBP13.02□□□□□ -0.33
SHANK2-211ENST00000449833 ZC3H6P61129 1189 aaKnown RBP13.02□□□□□ -0.33
SHANK2-211ENST00000449833 PPP2R3AQ06190 1150 aa13.02□□□□□ -0.33
SHANK2-211ENST00000449833 TFIP11Q9UBB9 837 aaKnown RBP13.02□□□□□ -0.33
SHANK2-211ENST00000449833 SAMM50Q9Y512 469 aa13.02□□□□□ -0.33
SHANK2-211ENST00000449833 HECW1Q76N89 1606 aa13.02□□□□□ -0.33
SHANK2-211ENST00000449833 GNAT3A8MTJ3 354 aa13.02□□□□□ -0.33
SHANK2-211ENST00000449833 E9PMD0 336 aa13.02□□□□□ -0.33
SHANK2-211ENST00000449833 FCHSD2O94868 740 aa13.02□□□□□ -0.33
SHANK2-211ENST00000449833 RHOXF2BP0C7M4 288 aa13.02□□□□□ -0.33
SHANK2-211ENST00000449833 RHOXF2Q9BQY4 288 aa13.02□□□□□ -0.33
SHANK2-211ENST00000449833 STARD3NLO95772 234 aa13.02□□□□□ -0.33
SHANK2-211ENST00000449833 TMEM67Q5HYA8 995 aa13.02□□□□□ -0.33
SHANK2-211ENST00000449833 MAK16Q9BXY0 300 aaKnown RBP13.02□□□□□ -0.33
SHANK2-211ENST00000449833 TTC16Q8NEE8 873 aa13.01□□□□□ -0.33
SHANK2-211ENST00000449833 ITGB1BP2Q9UKP3 347 aa13.01□□□□□ -0.33
SHANK2-211ENST00000449833 EEF2P13639 858 aaKnown RBP13.01□□□□□ -0.33
SHANK2-211ENST00000449833 MSANTD4Q8NCY6 345 aa13.01□□□□□ -0.33
SHANK2-211ENST00000449833 MMRN2Q9H8L6 949 aa13.01□□□□□ -0.33
SHANK2-211ENST00000449833 CHMP4BP1P59074 171 aa13.01□□□□□ -0.33
SHANK2-211ENST00000449833 RPGRIP1Q96KN7 1286 aa13.01□□□□□ -0.33
SHANK2-211ENST00000449833 CCDC42Q96M95 316 aa13.01□□□□□ -0.33
SHANK2-211ENST00000449833 MPHOSPH6Q99547 160 aaKnown RBP13.01□□□□□ -0.33
SHANK2-211ENST00000449833 CSRNP2Q9H175 543 aa13.01□□□□□ -0.33
SHANK2-211ENST00000449833 MTMR3Q13615 1198 aa13.01□□□□□ -0.33
SHANK2-211ENST00000449833 RRAGBQ5VZM2 374 aa13.01□□□□□ -0.33
SHANK2-211ENST00000449833 RRP36Q96EU6 259 aaKnown RBP13.01□□□□□ -0.33
SHANK2-211ENST00000449833 SLC5A1P13866 664 aa13.01□□□□□ -0.33
SHANK2-211ENST00000449833 NBPF3Q9H094 633 aa13.01□□□□□ -0.33
SHANK2-211ENST00000449833 ATP6V0A2Q9Y487 856 aa13.01□□□□□ -0.33
SHANK2-211ENST00000449833 TMEM232C9JQI7 657 aa13.01□□□□□ -0.33
SHANK2-211ENST00000449833 PPP1R1BQ9UD71 204 aaPredicted RBP13.01□□□□□ -0.33
SHANK2-211ENST00000449833 BAIAP2L1Q9UHR4 511 aa13.01□□□□□ -0.33
SHANK2-211ENST00000449833 WDHD1O75717 1129 aaPredicted RBP13.01□□□□□ -0.33
SHANK2-211ENST00000449833 HSPA1LP34931 641 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms