RNA–Protein interactions for RNA: ENST00000449457.1

LINC02561-201, Transcript of long intergenic non-protein coding RNA 2561, humanhuman

TSL 3 BASIC

Gene LINC02561, Length 692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02561-201ENST00000449457 PPP1R15BQ5SWA1 713 aa12.94□□□□□ -0.34
LINC02561-201ENST00000449457 FBXO46Q6PJ61 603 aaPredicted RBP12.94□□□□□ -0.34
LINC02561-201ENST00000449457 ANKRD13DQ6ZTN6 518 aa12.94□□□□□ -0.34
LINC02561-201ENST00000449457 MYD88Q99836 296 aa12.94□□□□□ -0.34
LINC02561-201ENST00000449457 PHAXQ9H814 394 aaKnown RBP12.94□□□□□ -0.34
LINC02561-201ENST00000449457 ZSWIM8A7E2V4 1837 aa12.94□□□□□ -0.34
LINC02561-201ENST00000449457 SSC5DA1L4H1 1573 aa12.94□□□□□ -0.34
LINC02561-201ENST00000449457 MYCP01106 439 aaPredicted RBP12.93□□□□□ -0.34
LINC02561-201ENST00000449457 USP17L8P0C7I0 530 aa12.93□□□□□ -0.34
LINC02561-201ENST00000449457 SLC39A7Q92504 469 aa12.93□□□□□ -0.34
LINC02561-201ENST00000449457 CLMNQ96JQ2 1002 aa12.93□□□□□ -0.34
LINC02561-201ENST00000449457 TRIM17Q9Y577 477 aa12.93□□□□□ -0.34
LINC02561-201ENST00000449457 AOX1Q06278 1338 aa12.92□□□□□ -0.34
LINC02561-201ENST00000449457 FKTNO75072 461 aa12.92□□□□□ -0.34
LINC02561-201ENST00000449457 TXNRD3Q86VQ6 643 aa12.92□□□□□ -0.34
LINC02561-201ENST00000449457 TMC2Q8TDI7 906 aa12.92□□□□□ -0.34
LINC02561-201ENST00000449457 PODXL2Q9NZ53 605 aa12.92□□□□□ -0.34
LINC02561-201ENST00000449457 ZNF609O15014 1411 aa12.91□□□□□ -0.34
LINC02561-201ENST00000449457 USP17L3A6NCW0 530 aa12.91□□□□□ -0.34
LINC02561-201ENST00000449457 USP17L4A6NCW7 530 aa12.91□□□□□ -0.34
LINC02561-201ENST00000449457 ELL2O00472 640 aaPredicted RBP12.91□□□□□ -0.34
LINC02561-201ENST00000449457 WNT10BO00744 389 aa12.91□□□□□ -0.34
LINC02561-201ENST00000449457 EN2P19622 333 aaPredicted RBP12.91□□□□□ -0.34
LINC02561-201ENST00000449457 CAMK2BQ13554 666 aa12.91□□□□□ -0.34
LINC02561-201ENST00000449457 DSG2Q14126 1118 aa12.91□□□□□ -0.34
LINC02561-201ENST00000449457 USP17L1Q7RTZ2 530 aa12.91□□□□□ -0.34
LINC02561-201ENST00000449457 AGBL3Q8NEM8 1001 aa12.91□□□□□ -0.34
LINC02561-201ENST00000449457 CD99L2Q8TCZ2 262 aa12.91□□□□□ -0.34
LINC02561-201ENST00000449457 ANGEL1Q9UNK9 670 aaKnown RBP12.91□□□□□ -0.34
LINC02561-201ENST00000449457 PITPNM2Q9BZ72 1349 aa12.9□□□□□ -0.34
LINC02561-201ENST00000449457 SNAP23O00161 211 aa12.9□□□□□ -0.34
LINC02561-201ENST00000449457 IGF2BP3O00425 579 aaKnown RBP eCLIP12.9□□□□□ -0.34
LINC02561-201ENST00000449457 TM4SF4P48230 202 aa12.9□□□□□ -0.34
LINC02561-201ENST00000449457 DACT2Q5SW24 774 aa12.9□□□□□ -0.34
LINC02561-201ENST00000449457 DUSP27Q5VZP5 1158 aa12.9□□□□□ -0.34
LINC02561-201ENST00000449457 OTOP1Q7RTM1 612 aa12.9□□□□□ -0.34
LINC02561-201ENST00000449457 RIC3Q7Z5B4 369 aa12.9□□□□□ -0.34
LINC02561-201ENST00000449457 KIAA0825Q8IV33 1275 aa12.9□□□□□ -0.34
LINC02561-201ENST00000449457 JAG2Q9Y219 1238 aa12.9□□□□□ -0.34
LINC02561-201ENST00000449457 XDHP47989 1333 aa12.89□□□□□ -0.35
LINC02561-201ENST00000449457 OTOFQ9HC10 1997 aa12.89□□□□□ -0.35
LINC02561-201ENST00000449457 CHL1O00533 1208 aa12.89□□□□□ -0.35
LINC02561-201ENST00000449457 SEMA3EO15041 775 aa12.89□□□□□ -0.35
LINC02561-201ENST00000449457 C7P10643 843 aa12.89□□□□□ -0.35
LINC02561-201ENST00000449457 GJA5P36382 358 aa12.89□□□□□ -0.35
LINC02561-201ENST00000449457 FXR1P51114 621 aaKnown RBP eCLIP12.89□□□□□ -0.35
LINC02561-201ENST00000449457 FKBP1BP68106 108 aa12.89□□□□□ -0.35
LINC02561-201ENST00000449457 PKN2Q16513 984 aaKnown RBP12.89□□□□□ -0.35
LINC02561-201ENST00000449457 ZBTB38Q8NAP3 1195 aaPredicted RBP12.89□□□□□ -0.35
LINC02561-201ENST00000449457 METRNQ9UJH8 293 aa12.89□□□□□ -0.35
LINC02561-201ENST00000449457 KIAA0100Q14667 2235 aaKnown RBP12.88□□□□□ -0.35
LINC02561-201ENST00000449457 C2orf72A6NCS6 295 aa12.88□□□□□ -0.35
LINC02561-201ENST00000449457 CCDC152Q4G0S7 254 aa12.88□□□□□ -0.35
LINC02561-201ENST00000449457 SPRYD7Q5W111 196 aa12.88□□□□□ -0.35
LINC02561-201ENST00000449457 ANKRD18AQ8IVF6 992 aa12.88□□□□□ -0.35
LINC02561-201ENST00000449457 GREM2Q9H772 168 aa12.88□□□□□ -0.35
LINC02561-201ENST00000449457 RBBP6Q7Z6E9 1792 aaKnown RBP12.87□□□□□ -0.35
LINC02561-201ENST00000449457 CLRN2A0PK11 232 aa12.87□□□□□ -0.35
LINC02561-201ENST00000449457 F8W031 263 aaPredicted RBP12.87□□□□□ -0.35
LINC02561-201ENST00000449457 SREBF2Q12772 1141 aa12.87□□□□□ -0.35
LINC02561-201ENST00000449457 MBIPQ9NS73 344 aa12.87□□□□□ -0.35
LINC02561-201ENST00000449457 DBF4Q9UBU7 674 aaPredicted RBP12.87□□□□□ -0.35
LINC02561-201ENST00000449457 MYH3P11055 1940 aa12.86□□□□□ -0.35
LINC02561-201ENST00000449457 MED23Q9ULK4 1368 aa12.86□□□□□ -0.35
LINC02561-201ENST00000449457 PDE8AO60658 829 aa12.86□□□□□ -0.35
LINC02561-201ENST00000449457 ATP2B4P23634 1241 aa12.86□□□□□ -0.35
LINC02561-201ENST00000449457 CTSWP56202 376 aa12.86□□□□□ -0.35
LINC02561-201ENST00000449457 CDAN1Q8IWY9 1227 aa12.86□□□□□ -0.35
LINC02561-201ENST00000449457 WNK4Q96J92 1243 aa12.86□□□□□ -0.35
LINC02561-201ENST00000449457 RANBP2P49792 3224 aaKnown RBP12.85□□□□□ -0.35
LINC02561-201ENST00000449457 PCCAP05165 728 aaPredicted RBP12.85□□□□□ -0.35
LINC02561-201ENST00000449457 NF2P35240 595 aa12.85□□□□□ -0.35
LINC02561-201ENST00000449457 FOXK1P85037 733 aa12.85□□□□□ -0.35
LINC02561-201ENST00000449457 LMOD3Q0VAK6 560 aa12.85□□□□□ -0.35
LINC02561-201ENST00000449457 CRHR2Q13324 411 aa12.85□□□□□ -0.35
LINC02561-201ENST00000449457 ARMC9Q7Z3E5 817 aa12.85□□□□□ -0.35
LINC02561-201ENST00000449457 OTUD5Q96G74 571 aa12.85□□□□□ -0.35
LINC02561-201ENST00000449457 MINPP1Q9UNW1 487 aa12.85□□□□□ -0.35
LINC02561-201ENST00000449457 A0A1B0GUL6 1792 aa12.84□□□□□ -0.35
LINC02561-201ENST00000449457 CCT4P50991 539 aaKnown RBP12.84□□□□□ -0.35
LINC02561-201ENST00000449457 GTF2IP78347 998 aa12.84□□□□□ -0.35
LINC02561-201ENST00000449457 CWF19L2Q2TBE0 894 aaKnown RBP12.84□□□□□ -0.35
LINC02561-201ENST00000449457 LDLRAD1Q5T700 205 aa12.84□□□□□ -0.35
LINC02561-201ENST00000449457 TMEM92Q6UXU6 159 aa12.84□□□□□ -0.35
LINC02561-201ENST00000449457 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.84□□□□□ -0.35
LINC02561-201ENST00000449457 CERS5Q8N5B7 392 aa12.84□□□□□ -0.35
LINC02561-201ENST00000449457 BABAM1Q9NWV8 329 aa12.84□□□□□ -0.35
LINC02561-201ENST00000449457 HYPKQ9NX55 129 aa12.84□□□□□ -0.35
LINC02561-201ENST00000449457 CWC25Q9NXE8 425 aaPredicted RBP12.84□□□□□ -0.35
LINC02561-201ENST00000449457 ARIH1Q9Y4X5 557 aaPredicted RBP12.84□□□□□ -0.35
LINC02561-201ENST00000449457 TRIOBPQ9H2D6 2365 aa12.83□□□□□ -0.36
LINC02561-201ENST00000449457 POTEMA6NI47 508 aa12.83□□□□□ -0.36
LINC02561-201ENST00000449457 POTEB2H3BUK9 544 aa12.83□□□□□ -0.36
LINC02561-201ENST00000449457 IGKV5-2P06315 115 aa12.83□□□□□ -0.36
LINC02561-201ENST00000449457 TRIM28Q13263 835 aaKnown RBP12.83□□□□□ -0.36
LINC02561-201ENST00000449457 PODNQ7Z5L7 613 aa12.83□□□□□ -0.36
LINC02561-201ENST00000449457 PLPP6Q8IY26 295 aa12.83□□□□□ -0.36
LINC02561-201ENST00000449457 GCC1Q96CN9 775 aa12.83□□□□□ -0.36
LINC02561-201ENST00000449457 PTPN18Q99952 460 aa12.83□□□□□ -0.36
LINC02561-201ENST00000449457 PNNQ9H307 717 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms