RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 OGFOD1Q8N543 542 aa17.28■□□□□ 0.36
GTF3C3-206ENST00000448539 KLRG1Q96E93 195 aa17.28■□□□□ 0.36
GTF3C3-206ENST00000448539 MXD3Q9BW11 206 aa17.28■□□□□ 0.36
GTF3C3-206ENST00000448539 HDAC9Q9UKV0 1011 aa17.28■□□□□ 0.36
GTF3C3-206ENST00000448539 JAG2Q9Y219 1238 aa17.28■□□□□ 0.36
GTF3C3-206ENST00000448539 SCN9AQ15858 1988 aa17.28■□□□□ 0.36
GTF3C3-206ENST00000448539 FKBP1AP62942 108 aaKnown RBP17.27■□□□□ 0.36
GTF3C3-206ENST00000448539 RBM26Q5T8P6 1007 aaKnown RBP17.27■□□□□ 0.36
GTF3C3-206ENST00000448539 XAGE2Q96GT9 111 aa17.27■□□□□ 0.36
GTF3C3-206ENST00000448539 GPR108Q9NPR9 543 aa17.27■□□□□ 0.36
GTF3C3-206ENST00000448539 ZNF609O15014 1411 aa17.27■□□□□ 0.35
GTF3C3-206ENST00000448539 FAM205AQ6ZU69 1335 aa17.26■□□□□ 0.35
GTF3C3-206ENST00000448539 SHTN1A0MZ66 631 aa17.26■□□□□ 0.35
GTF3C3-206ENST00000448539 ADORA1P30542 326 aa17.26■□□□□ 0.35
GTF3C3-206ENST00000448539 MMP14P50281 582 aa17.26■□□□□ 0.35
GTF3C3-206ENST00000448539 AAMPQ13685 434 aa17.26■□□□□ 0.35
GTF3C3-206ENST00000448539 TBC1D10BQ4KMP7 808 aaPredicted RBP17.26■□□□□ 0.35
GTF3C3-206ENST00000448539 TNNI3KQ59H18 835 aa17.26■□□□□ 0.35
GTF3C3-206ENST00000448539 CHADLQ6NUI6 762 aa17.26■□□□□ 0.35
GTF3C3-206ENST00000448539 SAMD7Q7Z3H4 446 aa17.26■□□□□ 0.35
GTF3C3-206ENST00000448539 KIAA0825Q8IV33 1275 aa17.26■□□□□ 0.35
GTF3C3-206ENST00000448539 TBC1D22AQ8WUA7 517 aa17.26■□□□□ 0.35
GTF3C3-206ENST00000448539 GMLQ99445 158 aa17.26■□□□□ 0.35
GTF3C3-206ENST00000448539 FPGT-TNNI3KV9GXZ4 949 aa17.26■□□□□ 0.35
GTF3C3-206ENST00000448539 APBB1O00213 710 aa17.25■□□□□ 0.35
GTF3C3-206ENST00000448539 RAB11FIP3O75154 756 aa17.25■□□□□ 0.35
GTF3C3-206ENST00000448539 POTEIP0CG38 1075 aa17.25■□□□□ 0.35
GTF3C3-206ENST00000448539 POTEJP0CG39 1038 aa17.25■□□□□ 0.35
GTF3C3-206ENST00000448539 PHKA1P46020 1223 aa17.25■□□□□ 0.35
GTF3C3-206ENST00000448539 KIF4BQ2VIQ3 1234 aa17.25■□□□□ 0.35
GTF3C3-206ENST00000448539 MFSD14BQ5SR56 506 aa17.25■□□□□ 0.35
GTF3C3-206ENST00000448539 CCDC102BQ68D86 513 aa17.25■□□□□ 0.35
GTF3C3-206ENST00000448539 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.25■□□□□ 0.35
GTF3C3-206ENST00000448539 PCNTO95613 3336 aa17.24■□□□□ 0.35
GTF3C3-206ENST00000448539 SEMA3EO15041 775 aa17.24■□□□□ 0.35
GTF3C3-206ENST00000448539 ZNF280AP59817 542 aaPredicted RBP17.24■□□□□ 0.35
GTF3C3-206ENST00000448539 TRPM4Q8TD43 1214 aa17.24■□□□□ 0.35
GTF3C3-206ENST00000448539 KIF1BPQ96EK5 621 aa17.24■□□□□ 0.35
GTF3C3-206ENST00000448539 DENND2AQ9ULE3 1009 aa17.24■□□□□ 0.35
GTF3C3-206ENST00000448539 F8W031 263 aaPredicted RBP17.23■□□□□ 0.35
GTF3C3-206ENST00000448539 CCDC158Q5M9N0 1113 aa17.23■□□□□ 0.35
GTF3C3-206ENST00000448539 IFFO2Q5TF58 517 aa17.23■□□□□ 0.35
GTF3C3-206ENST00000448539 CLASRPQ8N2M8 674 aaKnown RBP17.23■□□□□ 0.35
GTF3C3-206ENST00000448539 CERS5Q8N5B7 392 aa17.23■□□□□ 0.35
GTF3C3-206ENST00000448539 JMYQ8N9B5 988 aa17.23■□□□□ 0.35
GTF3C3-206ENST00000448539 WDR66Q8TBY9 1149 aa17.23■□□□□ 0.35
GTF3C3-206ENST00000448539 RHPN1Q8TCX5 695 aa17.23■□□□□ 0.35
GTF3C3-206ENST00000448539 ZC3H15Q8WU90 426 aaKnown RBP17.23■□□□□ 0.35
GTF3C3-206ENST00000448539 BCL11AQ9H165 835 aa17.23■□□□□ 0.35
GTF3C3-206ENST00000448539 MYOZ2Q9NPC6 264 aa17.23■□□□□ 0.35
GTF3C3-206ENST00000448539 PSME4Q14997 1843 aa17.23■□□□□ 0.35
GTF3C3-206ENST00000448539 UQCRFS1P1P0C7P4 283 aa17.22■□□□□ 0.35
GTF3C3-206ENST00000448539 IL1RAPL2Q9NP60 686 aa17.22■□□□□ 0.35
GTF3C3-206ENST00000448539 PCDHB15Q9Y5E8 787 aa17.22■□□□□ 0.35
GTF3C3-206ENST00000448539 HIRAP54198 1017 aaPredicted RBP17.21■□□□□ 0.35
GTF3C3-206ENST00000448539 TTC39AQ5SRH9 613 aa17.21■□□□□ 0.35
GTF3C3-206ENST00000448539 MAP1SQ66K74 1059 aaPredicted RBP17.21■□□□□ 0.35
GTF3C3-206ENST00000448539 AACSQ86V21 672 aa17.21■□□□□ 0.35
GTF3C3-206ENST00000448539 CNTROBQ8N137 903 aa17.21■□□□□ 0.35
GTF3C3-206ENST00000448539 EXOC6Q8TAG9 804 aa17.21■□□□□ 0.35
GTF3C3-206ENST00000448539 DBNDD2Q9BQY9 259 aa17.21■□□□□ 0.35
GTF3C3-206ENST00000448539 CCDC8Q9H0W5 538 aaPredicted RBP17.21■□□□□ 0.35
GTF3C3-206ENST00000448539 TTF2Q9UNY4 1162 aaKnown RBP17.21■□□□□ 0.35
GTF3C3-206ENST00000448539 EGFRP00533 1210 aa17.2■□□□□ 0.34
GTF3C3-206ENST00000448539 RBM5P52756 815 aaKnown RBP eCLIP17.2■□□□□ 0.34
GTF3C3-206ENST00000448539 DLGAP5Q15398 846 aa17.2■□□□□ 0.34
GTF3C3-206ENST00000448539 PPP4R3CPQ6ZMV5 832 aa17.2■□□□□ 0.34
GTF3C3-206ENST00000448539 ZGPATQ8N5A5 531 aaKnown RBP17.2■□□□□ 0.34
GTF3C3-206ENST00000448539 EAF2Q96CJ1 260 aaPredicted RBP17.2■□□□□ 0.34
GTF3C3-206ENST00000448539 LRRCC1Q9C099 1032 aa17.2■□□□□ 0.34
GTF3C3-206ENST00000448539 MAST3O60307 1309 aa17.2■□□□□ 0.34
GTF3C3-206ENST00000448539 ZBTB22O15209 634 aa17.19■□□□□ 0.34
GTF3C3-206ENST00000448539 IFIT2P09913 472 aaKnown RBP17.19■□□□□ 0.34
GTF3C3-206ENST00000448539 RASGRF1Q13972 1273 aa17.19■□□□□ 0.34
GTF3C3-206ENST00000448539 SCARF1Q14162 830 aa17.19■□□□□ 0.34
GTF3C3-206ENST00000448539 DCPSQ96C86 337 aaKnown RBP17.19■□□□□ 0.34
GTF3C3-206ENST00000448539 DCTPP1Q9H773 170 aa17.19■□□□□ 0.34
GTF3C3-206ENST00000448539 SUGT1Q9Y2Z0 365 aa17.19■□□□□ 0.34
GTF3C3-206ENST00000448539 ARID4AP29374 1257 aaPredicted RBP17.18■□□□□ 0.34
GTF3C3-206ENST00000448539 IRX6P78412 446 aaPredicted RBP17.18■□□□□ 0.34
GTF3C3-206ENST00000448539 CFAP100Q494V2 611 aa17.18■□□□□ 0.34
GTF3C3-206ENST00000448539 ZBTB47Q9UFB7 747 aaPredicted RBP17.18■□□□□ 0.34
GTF3C3-206ENST00000448539 PGAP2Q9UHJ9 254 aa17.18■□□□□ 0.34
GTF3C3-206ENST00000448539 DBNLQ9UJU6 430 aaKnown RBP17.18■□□□□ 0.34
GTF3C3-206ENST00000448539 ARAP2Q8WZ64 1704 aa17.18■□□□□ 0.34
GTF3C3-206ENST00000448539 PDS5AQ29RF7 1337 aaKnown RBP17.18■□□□□ 0.34
GTF3C3-206ENST00000448539 ADAMTSL1Q8N6G6 1762 aa17.17■□□□□ 0.34
GTF3C3-206ENST00000448539 MYO1BO43795 1136 aa17.17■□□□□ 0.34
GTF3C3-206ENST00000448539 LDHBP07195 334 aaKnown RBP17.17■□□□□ 0.34
GTF3C3-206ENST00000448539 CDC37L1Q7L3B6 337 aa17.17■□□□□ 0.34
GTF3C3-206ENST00000448539 SPATA5Q8NB90 893 aa17.17■□□□□ 0.34
GTF3C3-206ENST00000448539 TLR7Q9NYK1 1049 aaKnown RBP17.17■□□□□ 0.34
GTF3C3-206ENST00000448539 GGA3Q9NZ52 723 aa17.17■□□□□ 0.34
GTF3C3-206ENST00000448539 ABCF2Q9UG63 623 aa17.17■□□□□ 0.34
GTF3C3-206ENST00000448539 SERPINA10Q9UK55 444 aa17.17■□□□□ 0.34
GTF3C3-206ENST00000448539 SALL1Q9NSC2 1324 aa17.17■□□□□ 0.34
GTF3C3-206ENST00000448539 WNT10BO00744 389 aa17.16■□□□□ 0.34
GTF3C3-206ENST00000448539 CRKP46108 304 aa17.16■□□□□ 0.34
GTF3C3-206ENST00000448539 NBPF9Q3BBW0 867 aa17.16■□□□□ 0.34
GTF3C3-206ENST00000448539 ANGEL2Q5VTE6 544 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms