RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 ZBTB3Q9H5J0 574 aa18.32■□□□□ 0.52
CHRD-205ENST00000448472 TOMM22Q9NS69 142 aa18.32■□□□□ 0.52
CHRD-205ENST00000448472 FAM208AQ9UK61 1670 aaKnown RBP18.32■□□□□ 0.52
CHRD-205ENST00000448472 SYKP43405 635 aa18.32■□□□□ 0.52
CHRD-205ENST00000448472 TRDNQ13061 729 aa18.32■□□□□ 0.52
CHRD-205ENST00000448472 IMMTQ16891 758 aaKnown RBP18.32■□□□□ 0.52
CHRD-205ENST00000448472 NFXL1Q6ZNB6 911 aa18.32■□□□□ 0.52
CHRD-205ENST00000448472 PRC1O43663 620 aa18.32■□□□□ 0.52
CHRD-205ENST00000448472 FMR1NBQ8N0W7 255 aaPredicted RBP18.32■□□□□ 0.52
CHRD-205ENST00000448472 EPC1Q9H2F5 836 aa18.32■□□□□ 0.52
CHRD-205ENST00000448472 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.32■□□□□ 0.523e-6■■■□□ 14.6
CHRD-205ENST00000448472 TAF3Q5VWG9 929 aa18.31■□□□□ 0.52
CHRD-205ENST00000448472 ENGASEQ8NFI3 743 aa18.31■□□□□ 0.52
CHRD-205ENST00000448472 CARMIL3Q8ND23 1372 aa18.31■□□□□ 0.52
CHRD-205ENST00000448472 TTC39AQ5SRH9 613 aa18.31■□□□□ 0.52
CHRD-205ENST00000448472 ORAI2Q96SN7 254 aa18.31■□□□□ 0.52
CHRD-205ENST00000448472 CCDC82Q8N4S0 544 aa18.31■□□□□ 0.52
CHRD-205ENST00000448472 CCDC34Q96HJ3 373 aa18.31■□□□□ 0.52
CHRD-205ENST00000448472 CLCN6P51797 869 aa18.3■□□□□ 0.52
CHRD-205ENST00000448472 GNG11P61952 73 aa18.3■□□□□ 0.52
CHRD-205ENST00000448472 SPECC1Q5M775 1068 aa18.3■□□□□ 0.52
CHRD-205ENST00000448472 LINC00301Q8NCQ3 95 aa18.3■□□□□ 0.52
CHRD-205ENST00000448472 VGLL3A8MV65 326 aa18.3■□□□□ 0.52
CHRD-205ENST00000448472 SEC31AO94979 1220 aaKnown RBP18.3■□□□□ 0.52
CHRD-205ENST00000448472 CHMP4CQ96CF2 233 aa18.3■□□□□ 0.52
CHRD-205ENST00000448472 PFKFB1P16118 471 aa18.29■□□□□ 0.52
CHRD-205ENST00000448472 MYSM1Q5VVJ2 828 aa18.29■□□□□ 0.52
CHRD-205ENST00000448472 NBPF11Q86T75 865 aa18.29■□□□□ 0.52
CHRD-205ENST00000448472 TIGD1Q96MW7 591 aa18.29■□□□□ 0.52
CHRD-205ENST00000448472 AIFM3Q96NN9 605 aa18.29■□□□□ 0.52
CHRD-205ENST00000448472 CEP126Q9P2H0 1117 aa18.29■□□□□ 0.52
CHRD-205ENST00000448472 TATP17735 454 aaPredicted RBP18.29■□□□□ 0.52
CHRD-205ENST00000448472 TRIM29Q14134 588 aa18.29■□□□□ 0.52
CHRD-205ENST00000448472 PDIA6Q15084 440 aa18.29■□□□□ 0.52
CHRD-205ENST00000448472 MICU3Q86XE3 530 aa18.29■□□□□ 0.52
CHRD-205ENST00000448472 IMPACTQ9P2X3 320 aa18.29■□□□□ 0.52
CHRD-205ENST00000448472 SETD1AO15047 1707 aaKnown RBP18.29■□□□□ 0.52
CHRD-205ENST00000448472 LRRC24Q50LG9 513 aa18.29■□□□□ 0.52
CHRD-205ENST00000448472 RGPD1P0DJD0 1748 aa18.29■□□□□ 0.52
CHRD-205ENST00000448472 RNF113AO15541 343 aaKnown RBP18.28■□□□□ 0.52
CHRD-205ENST00000448472 PNOCQ13519 176 aa18.28■□□□□ 0.52
CHRD-205ENST00000448472 AXIN2Q9Y2T1 843 aa18.28■□□□□ 0.52
CHRD-205ENST00000448472 SNRPA1P09661 255 aaKnown RBP18.28■□□□□ 0.52
CHRD-205ENST00000448472 NLRP12P59046 1061 aa18.28■□□□□ 0.52
CHRD-205ENST00000448472 ETF1P62495 437 aaKnown RBP18.28■□□□□ 0.52
CHRD-205ENST00000448472 CCDC158Q5M9N0 1113 aa18.28■□□□□ 0.52
CHRD-205ENST00000448472 ANO1Q5XXA6 986 aa18.28■□□□□ 0.52
CHRD-205ENST00000448472 RTEL1Q9NZ71 1219 aa18.28■□□□□ 0.52
CHRD-205ENST00000448472 A0A1B0GUL7 405 aa18.28■□□□□ 0.52
CHRD-205ENST00000448472 CPLX2Q6PUV4 134 aaKnown RBP18.28■□□□□ 0.52
CHRD-205ENST00000448472 ZFP91Q96JP5 570 aaPredicted RBP18.28■□□□□ 0.52
CHRD-205ENST00000448472 HELLSQ9NRZ9 838 aa18.28■□□□□ 0.52
CHRD-205ENST00000448472 ZNF213O14771 459 aa18.27■□□□□ 0.52
CHRD-205ENST00000448472 CABP4P57796 275 aa18.27■□□□□ 0.52
CHRD-205ENST00000448472 ATL3Q6DD88 541 aa18.27■□□□□ 0.52
CHRD-205ENST00000448472 CNNM3Q8NE01 707 aa18.27■□□□□ 0.52
CHRD-205ENST00000448472 MAST3O60307 1309 aa18.27■□□□□ 0.52
CHRD-205ENST00000448472 ILDR1Q86SU0 546 aaPredicted RBP18.27■□□□□ 0.52
CHRD-205ENST00000448472 CLIC6Q96NY7 704 aa18.27■□□□□ 0.52
CHRD-205ENST00000448472 ALG1Q9BT22 464 aa18.27■□□□□ 0.52
CHRD-205ENST00000448472 FDPSP14324 419 aaKnown RBP18.27■□□□□ 0.51
CHRD-205ENST00000448472 EVCP57679 992 aa18.27■□□□□ 0.51
CHRD-205ENST00000448472 CPLX3Q8WVH0 158 aa18.27■□□□□ 0.51
CHRD-205ENST00000448472 PHKBQ93100 1093 aa18.27■□□□□ 0.51
CHRD-205ENST00000448472 DSCC1Q9BVC3 393 aa18.27■□□□□ 0.51
CHRD-205ENST00000448472 M0R2C6 588 aa18.26■□□□□ 0.51
CHRD-205ENST00000448472 CCP110O43303 1012 aa18.26■□□□□ 0.51
CHRD-205ENST00000448472 CBFA2T2O43439 604 aa18.26■□□□□ 0.51
CHRD-205ENST00000448472 KARSQ15046 597 aaKnown RBP18.26■□□□□ 0.51
CHRD-205ENST00000448472 ZNF274Q96GC6 653 aaPredicted RBP18.26■□□□□ 0.51
CHRD-205ENST00000448472 DIP2BQ9P265 1576 aa18.26■□□□□ 0.51
CHRD-205ENST00000448472 FBXO18Q8NFZ0 1043 aa18.26■□□□□ 0.51
CHRD-205ENST00000448472 DPF2Q92785 391 aa18.26■□□□□ 0.51
CHRD-205ENST00000448472 OSBPL5Q9H0X9 879 aaPredicted RBP18.26■□□□□ 0.51
CHRD-205ENST00000448472 NEK11Q8NG66 645 aa18.26■□□□□ 0.51
CHRD-205ENST00000448472 OSBP2Q969R2 916 aa18.26■□□□□ 0.51
CHRD-205ENST00000448472 PUS3Q9BZE2 481 aaKnown RBP18.26■□□□□ 0.51
CHRD-205ENST00000448472 SLC52A2Q9HAB3 445 aa18.26■□□□□ 0.51
CHRD-205ENST00000448472 ZNF446Q9NWS9 450 aa18.26■□□□□ 0.51
CHRD-205ENST00000448472 CALCOCO1Q9P1Z2 691 aa18.26■□□□□ 0.51
CHRD-205ENST00000448472 CACNA1FO60840 1977 aa18.25■□□□□ 0.51
CHRD-205ENST00000448472 CASQ1P31415 396 aa18.25■□□□□ 0.51
CHRD-205ENST00000448472 EXOSC10Q01780 885 aaKnown RBP18.25■□□□□ 0.51
CHRD-205ENST00000448472 MYL5Q02045 173 aa18.25■□□□□ 0.51
CHRD-205ENST00000448472 CCDC57Q2TAC2 916 aa18.25■□□□□ 0.51
CHRD-205ENST00000448472 JMYQ8N9B5 988 aa18.25■□□□□ 0.51
CHRD-205ENST00000448472 FANCLQ9NW38 375 aa18.25■□□□□ 0.51
CHRD-205ENST00000448472 TUBGCP6Q96RT7 1819 aa18.25■□□□□ 0.51
CHRD-205ENST00000448472 TMEM232C9JQI7 657 aa18.24■□□□□ 0.51
CHRD-205ENST00000448472 PNMA6AP0CW24 399 aaPredicted RBP18.24■□□□□ 0.51
CHRD-205ENST00000448472 NCOA7Q8NI08 942 aa18.24■□□□□ 0.51
CHRD-205ENST00000448472 MYL10Q9BUA6 226 aa18.24■□□□□ 0.51
CHRD-205ENST00000448472 ZCCHC17Q9NP64 241 aaKnown RBP18.24■□□□□ 0.51
CHRD-205ENST00000448472 PSDA5PKW4 1024 aaPredicted RBP18.24■□□□□ 0.51
CHRD-205ENST00000448472 LRRFIP1Q32MZ4 808 aaKnown RBP18.24■□□□□ 0.51
CHRD-205ENST00000448472 RRP12Q5JTH9 1297 aaKnown RBP18.24■□□□□ 0.51
CHRD-205ENST00000448472 ZMYM1Q5SVZ6 1142 aa18.24■□□□□ 0.51
CHRD-205ENST00000448472 ADGRL3Q9HAR2 1447 aa18.24■□□□□ 0.51
CHRD-205ENST00000448472 ZSCAN12O43309 604 aa18.24■□□□□ 0.51
CHRD-205ENST00000448472 IDH1O75874 414 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms