RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 BRPF1P55201 1214 aaPredicted RBP22.19■■□□□ 1.14
DDX56-207ENST00000448192 RGMBQ6NW40 437 aa22.19■■□□□ 1.14
DDX56-207ENST00000448192 PRDM10Q9NQV6 1147 aa22.19■■□□□ 1.14
DDX56-207ENST00000448192 UBTFL1P0CB47 393 aaPredicted RBP22.18■■□□□ 1.14
DDX56-207ENST00000448192 HSPA8P11142 646 aaKnown RBP22.18■■□□□ 1.14
DDX56-207ENST00000448192 PRAMEF18Q5VWM3 479 aa22.18■■□□□ 1.14
DDX56-207ENST00000448192 FAM84BQ96KN1 310 aaPredicted RBP22.18■■□□□ 1.14
DDX56-207ENST00000448192 ZNF157P51786 506 aaPredicted RBP22.17■■□□□ 1.14
DDX56-207ENST00000448192 NOGQ13253 232 aa22.17■■□□□ 1.14
DDX56-207ENST00000448192 DLGAP5Q15398 846 aa22.17■■□□□ 1.14
DDX56-207ENST00000448192 ECM29Q5VYK3 1845 aa22.17■■□□□ 1.14
DDX56-207ENST00000448192 KIF16BQ96L93 1317 aa22.16■■□□□ 1.14
DDX56-207ENST00000448192 FKBP1AP62942 108 aaKnown RBP22.16■■□□□ 1.14
DDX56-207ENST00000448192 HNRNPUQ00839 825 aaKnown RBP eCLIP22.16■■□□□ 1.14
DDX56-207ENST00000448192 VPS37DQ86XT2 251 aa22.16■■□□□ 1.14
DDX56-207ENST00000448192 TDRD7Q8NHU6 1098 aaKnown RBP22.16■■□□□ 1.14
DDX56-207ENST00000448192 PAPPA2Q9BXP8 1791 aa22.16■■□□□ 1.14
DDX56-207ENST00000448192 PDE8BO95263 885 aa22.15■■□□□ 1.14
DDX56-207ENST00000448192 APOBEC3FQ8IUX4 373 aaKnown RBP22.15■■□□□ 1.14
DDX56-207ENST00000448192 CCDC102AQ96A19 550 aa22.15■■□□□ 1.14
DDX56-207ENST00000448192 ZBED3Q96IU2 234 aaPredicted RBP22.15■■□□□ 1.14
DDX56-207ENST00000448192 ZIC5Q96T25 663 aa22.15■■□□□ 1.14
DDX56-207ENST00000448192 FAM205AQ6ZU69 1335 aa22.14■■□□□ 1.14
DDX56-207ENST00000448192 VGLL2Q8N8G2 317 aa22.14■■□□□ 1.13
DDX56-207ENST00000448192 TSKSQ9UJT2 592 aa22.14■■□□□ 1.13
DDX56-207ENST00000448192 IQSEC3Q9UPP2 1182 aaPredicted RBP22.14■■□□□ 1.13
DDX56-207ENST00000448192 FAM155AB1AL88 458 aaPredicted RBP22.13■■□□□ 1.13
DDX56-207ENST00000448192 CAPN15O75808 1086 aa22.13■■□□□ 1.13
DDX56-207ENST00000448192 RFX5P48382 616 aaPredicted RBP22.13■■□□□ 1.13
DDX56-207ENST00000448192 RBM5P52756 815 aaKnown RBP eCLIP22.13■■□□□ 1.13
DDX56-207ENST00000448192 FKBP1BP68106 108 aa22.13■■□□□ 1.13
DDX56-207ENST00000448192 TTLL12Q14166 644 aaPredicted RBP22.13■■□□□ 1.13
DDX56-207ENST00000448192 CFAP100Q494V2 611 aa22.13■■□□□ 1.13
DDX56-207ENST00000448192 CAVIN4Q5BKX8 364 aa22.13■■□□□ 1.13
DDX56-207ENST00000448192 MFSD14BQ5SR56 506 aa22.13■■□□□ 1.13
DDX56-207ENST00000448192 MOB2Q70IA6 237 aa22.13■■□□□ 1.13
DDX56-207ENST00000448192 ARHGAP45Q92619 1136 aa22.13■■□□□ 1.13
DDX56-207ENST00000448192 PCDHAC2Q9Y5I4 1007 aa22.13■■□□□ 1.13
DDX56-207ENST00000448192 LRRFIP2Q9Y608 721 aaKnown RBP22.13■■□□□ 1.13
DDX56-207ENST00000448192 ARAP2Q8WZ64 1704 aa22.13■■□□□ 1.13
DDX56-207ENST00000448192 EYA2O00167 538 aa22.12■■□□□ 1.13
DDX56-207ENST00000448192 FRAT2O75474 233 aaPredicted RBP22.12■■□□□ 1.13
DDX56-207ENST00000448192 NF2P35240 595 aa22.12■■□□□ 1.13
DDX56-207ENST00000448192 PTPN12Q05209 780 aaKnown RBP22.12■■□□□ 1.13
DDX56-207ENST00000448192 FBXO33Q7Z6M2 555 aa22.12■■□□□ 1.13
DDX56-207ENST00000448192 MTMR14Q8NCE2 650 aa22.12■■□□□ 1.13
DDX56-207ENST00000448192 MEIS3Q99687 375 aa22.12■■□□□ 1.13
DDX56-207ENST00000448192 HDAC5Q9UQL6 1122 aa22.12■■□□□ 1.13
DDX56-207ENST00000448192 UBE2Q2LH0YL09 131 aa22.11■■□□□ 1.13
DDX56-207ENST00000448192 MYO1BO43795 1136 aa22.11■■□□□ 1.13
DDX56-207ENST00000448192 CHAF1AQ13111 956 aaPredicted RBP22.11■■□□□ 1.13
DDX56-207ENST00000448192 PUM3Q15397 648 aaKnown RBP22.11■■□□□ 1.13
DDX56-207ENST00000448192 FRAT1Q92837 279 aaPredicted RBP22.11■■□□□ 1.13
DDX56-207ENST00000448192 PRMT6Q96LA8 375 aaPredicted RBP22.11■■□□□ 1.13
DDX56-207ENST00000448192 SIL1Q9H173 461 aa22.11■■□□□ 1.13
DDX56-207ENST00000448192 CLRN2A0PK11 232 aa22.1■■□□□ 1.13
DDX56-207ENST00000448192 SPDYE2BA6NHP3 402 aa22.1■■□□□ 1.13
DDX56-207ENST00000448192 IPO8O15397 1037 aaKnown RBP22.1■■□□□ 1.13
DDX56-207ENST00000448192 CA12O43570 354 aa22.1■■□□□ 1.13
DDX56-207ENST00000448192 BCAR3O75815 825 aa22.1■■□□□ 1.13
DDX56-207ENST00000448192 SLC10A3P09131 477 aa22.1■■□□□ 1.13
DDX56-207ENST00000448192 IFIT1P09914 478 aaKnown RBP22.1■■□□□ 1.13
DDX56-207ENST00000448192 SPDYE6P0CI01 402 aa22.1■■□□□ 1.13
DDX56-207ENST00000448192 KIF23Q02241 960 aaPredicted RBP22.1■■□□□ 1.13
DDX56-207ENST00000448192 INTS3Q68E01 1043 aaKnown RBP22.1■■□□□ 1.13
DDX56-207ENST00000448192 TTF2Q9UNY4 1162 aaKnown RBP22.1■■□□□ 1.13
DDX56-207ENST00000448192 MYH13Q9UKX3 1938 aa22.1■■□□□ 1.13
DDX56-207ENST00000448192 BCAMP50895 628 aa22.09■■□□□ 1.13
DDX56-207ENST00000448192 PRKG1Q13976 671 aa22.09■■□□□ 1.13
DDX56-207ENST00000448192 ATG9AQ7Z3C6 839 aa22.09■■□□□ 1.13
DDX56-207ENST00000448192 DEFB129Q9H1M3 183 aa22.09■■□□□ 1.13
DDX56-207ENST00000448192 AKAP11Q9UKA4 1901 aa22.09■■□□□ 1.13
DDX56-207ENST00000448192 FGFR2P21802 821 aa22.08■■□□□ 1.13
DDX56-207ENST00000448192 RASAL3Q86YV0 1011 aa22.08■■□□□ 1.13
DDX56-207ENST00000448192 VEZTQ9HBM0 779 aa22.08■■□□□ 1.13
DDX56-207ENST00000448192 SLC5A1P13866 664 aa22.07■■□□□ 1.12
DDX56-207ENST00000448192 TRIM27P14373 513 aa22.07■■□□□ 1.12
DDX56-207ENST00000448192 ATF7IPQ6VMQ6 1270 aa22.07■■□□□ 1.12
DDX56-207ENST00000448192 TNNQ9UQP3 1299 aa22.07■■□□□ 1.12
DDX56-207ENST00000448192 COL1A1P02452 1464 aaPredicted RBP22.07■■□□□ 1.12
DDX56-207ENST00000448192 AOX1Q06278 1338 aa22.06■■□□□ 1.12
DDX56-207ENST00000448192 GNAI3P08754 354 aa22.06■■□□□ 1.12
DDX56-207ENST00000448192 LPIN2Q92539 896 aa22.06■■□□□ 1.12
DDX56-207ENST00000448192 CLUAP1Q96AJ1 413 aa22.06■■□□□ 1.12
DDX56-207ENST00000448192 SERPINA10Q9UK55 444 aa22.06■■□□□ 1.12
DDX56-207ENST00000448192 FBXO3Q9UK99 471 aa22.06■■□□□ 1.12
DDX56-207ENST00000448192 PA2G4Q9UQ80 394 aaKnown RBP22.06■■□□□ 1.12
DDX56-207ENST00000448192 CIAO1O76071 339 aa22.05■■□□□ 1.12
DDX56-207ENST00000448192 GRIK5Q16478 980 aa22.05■■□□□ 1.12
DDX56-207ENST00000448192 ARMC9Q7Z3E5 817 aa22.05■■□□□ 1.12
DDX56-207ENST00000448192 TBC1D22AQ8WUA7 517 aa22.05■■□□□ 1.12
DDX56-207ENST00000448192 CEP126Q9P2H0 1117 aa22.05■■□□□ 1.12
DDX56-207ENST00000448192 CASP8AP2Q9UKL3 1982 aa22.05■■□□□ 1.12
DDX56-207ENST00000448192 CSRNP1Q96S65 589 aa22.04■■□□□ 1.12
DDX56-207ENST00000448192 ANGEL1Q9UNK9 670 aaKnown RBP22.04■■□□□ 1.12
DDX56-207ENST00000448192 FZD1Q9UP38 647 aa22.04■■□□□ 1.12
DDX56-207ENST00000448192 PPP2R3BQ9Y5P8 575 aa22.04■■□□□ 1.12
DDX56-207ENST00000448192 IL15P40933 162 aaPredicted RBP22.03■■□□□ 1.12
DDX56-207ENST00000448192 CRKP46108 304 aa22.03■■□□□ 1.12
DDX56-207ENST00000448192 ATP2B3Q16720 1220 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms