RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 DDX17Q92841 729 aaKnown RBP8.8□□□□□ -1
USP49-205ENST00000448078 COL26A1Q96A83 441 aa8.8□□□□□ -1
USP49-205ENST00000448078 SAP130Q9H0E3 1048 aa8.8□□□□□ -1
USP49-205ENST00000448078 LRFN2Q9ULH4 789 aa8.8□□□□□ -1
USP49-205ENST00000448078 ADAMTS8Q9UP79 889 aa8.8□□□□□ -1
USP49-205ENST00000448078 CCDC9Q9Y3X0 531 aaKnown RBP8.8□□□□□ -1
USP49-205ENST00000448078 ABCC5O15440 1437 aa8.8□□□□□ -1
USP49-205ENST00000448078 ZFYVE9O95405 1425 aa8.8□□□□□ -1
USP49-205ENST00000448078 BLMP54132 1417 aaPredicted RBP8.8□□□□□ -1
USP49-205ENST00000448078 LRPPRCP42704 1394 aaKnown RBP8.79□□□□□ -1
USP49-205ENST00000448078 OIP5O43482 229 aa8.79□□□□□ -1
USP49-205ENST00000448078 ABL1P00519 1130 aa8.79□□□□□ -1
USP49-205ENST00000448078 GRIN2CQ14957 1233 aa8.79□□□□□ -1
USP49-205ENST00000448078 UNC5CLQ8IV45 518 aa8.79□□□□□ -1
USP49-205ENST00000448078 UBE2OQ9C0C9 1292 aaKnown RBP8.79□□□□□ -1
USP49-205ENST00000448078 SEPT3Q9UH03 358 aa8.79□□□□□ -1
USP49-205ENST00000448078 CHD2O14647 1828 aaKnown RBP8.79□□□□□ -1
USP49-205ENST00000448078 NPHP3Q7Z494 1330 aa8.79□□□□□ -1
USP49-205ENST00000448078 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.78□□□□□ -1
USP49-205ENST00000448078 TMEM88BA6NKF7 163 aa8.78□□□□□ -1
USP49-205ENST00000448078 RNF225M0QZC1 329 aaPredicted RBP8.78□□□□□ -1
USP49-205ENST00000448078 YY1P25490 414 aa8.78□□□□□ -1
USP49-205ENST00000448078 FAM50AQ14320 339 aaKnown RBP8.78□□□□□ -1
USP49-205ENST00000448078 SLCO4C1Q6ZQN7 724 aa8.78□□□□□ -1
USP49-205ENST00000448078 ABTB2Q8N961 1025 aa8.78□□□□□ -1
USP49-205ENST00000448078 RETREG2Q8NC44 543 aa8.78□□□□□ -1
USP49-205ENST00000448078 SLC30A3Q99726 388 aa8.78□□□□□ -1
USP49-205ENST00000448078 FAM13BQ9NYF5 915 aa8.78□□□□□ -1
USP49-205ENST00000448078 BCS1LQ9Y276 419 aa8.78□□□□□ -1
USP49-205ENST00000448078 USP20Q9Y2K6 914 aa8.78□□□□□ -1
USP49-205ENST00000448078 ASXL1Q8IXJ9 1541 aa8.78□□□□□ -1
USP49-205ENST00000448078 TRPM2O94759 1503 aa8.77□□□□□ -1.01
USP49-205ENST00000448078 CCINQ13939 588 aa8.77□□□□□ -1.01
USP49-205ENST00000448078 DEFB132Q7Z7B7 95 aa8.77□□□□□ -1.01
USP49-205ENST00000448078 SCARF2Q96GP6 870 aaPredicted RBP8.77□□□□□ -1.01
USP49-205ENST00000448078 ORAI2Q96SN7 254 aa8.77□□□□□ -1.01
USP49-205ENST00000448078 AVENQ9NQS1 362 aaPredicted RBP8.77□□□□□ -1.01
USP49-205ENST00000448078 MST1RQ04912 1400 aa8.77□□□□□ -1.01
USP49-205ENST00000448078 NFKB1P19838 968 aa8.76□□□□□ -1.01
USP49-205ENST00000448078 LORP23490 312 aaPredicted RBP8.76□□□□□ -1.01
USP49-205ENST00000448078 SCNN1AP37088 669 aa8.76□□□□□ -1.01
USP49-205ENST00000448078 KRT27Q7Z3Y8 459 aa8.76□□□□□ -1.01
USP49-205ENST00000448078 PIK3R5Q8WYR1 880 aa8.76□□□□□ -1.01
USP49-205ENST00000448078 STIM2Q9P246 746 aa8.76□□□□□ -1.01
USP49-205ENST00000448078 RTCBQ9Y3I0 505 aaKnown RBP8.76□□□□□ -1.01
USP49-205ENST00000448078 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.76□□□□□ -1.01
USP49-205ENST00000448078 ATRNO75882 1429 aa8.76□□□□□ -1.01
USP49-205ENST00000448078 DAPK1P53355 1430 aa8.76□□□□□ -1.01
USP49-205ENST00000448078 ADAMTS13Q76LX8 1427 aa8.76□□□□□ -1.01
USP49-205ENST00000448078 DIP2AQ14689 1571 aa8.76□□□□□ -1.01
USP49-205ENST00000448078 SETBP1Q9Y6X0 1596 aa8.75□□□□□ -1.01
USP49-205ENST00000448078 ANKRD50Q9ULJ7 1429 aa8.75□□□□□ -1.01
USP49-205ENST00000448078 EPXP11678 715 aa8.75□□□□□ -1.01
USP49-205ENST00000448078 SSFA2P28290 1259 aa8.75□□□□□ -1.01
USP49-205ENST00000448078 ARID4AP29374 1257 aaPredicted RBP8.75□□□□□ -1.01
USP49-205ENST00000448078 INPP5BP32019 993 aa8.75□□□□□ -1.01
USP49-205ENST00000448078 KCNQ4P56696 695 aa8.75□□□□□ -1.01
USP49-205ENST00000448078 GTF3C2Q8WUA4 911 aaPredicted RBP8.75□□□□□ -1.01
USP49-205ENST00000448078 PHF20L1A8MW92 1017 aa8.74□□□□□ -1.01
USP49-205ENST00000448078 XYLBO75191 536 aa8.74□□□□□ -1.01
USP49-205ENST00000448078 RARAP10276 462 aa8.74□□□□□ -1.01
USP49-205ENST00000448078 PCSK2P16519 638 aa8.74□□□□□ -1.01
USP49-205ENST00000448078 ZAP70P43403 619 aa8.74□□□□□ -1.01
USP49-205ENST00000448078 ETFBKMTQ8IXQ9 262 aa8.74□□□□□ -1.01
USP49-205ENST00000448078 BEND7Q8N7W2 519 aaPredicted RBP8.74□□□□□ -1.01
USP49-205ENST00000448078 LRRC4BQ9NT99 713 aa8.74□□□□□ -1.01
USP49-205ENST00000448078 VPS8Q8N3P4 1428 aa8.73□□□□□ -1.01
USP49-205ENST00000448078 ADGRL3Q9HAR2 1447 aa8.73□□□□□ -1.01
USP49-205ENST00000448078 C1orf167Q5SNV9 1468 aa8.73□□□□□ -1.01
USP49-205ENST00000448078 ELOA3CA0A087WX78 387 aaPredicted RBP8.73□□□□□ -1.01
USP49-205ENST00000448078 ELOA3DA6NLF2 546 aaPredicted RBP8.73□□□□□ -1.01
USP49-205ENST00000448078 SHISA8B8ZZ34 492 aa8.73□□□□□ -1.01
USP49-205ENST00000448078 SIN3BO75182 1162 aa8.73□□□□□ -1.01
USP49-205ENST00000448078 SASH3O75995 380 aa8.73□□□□□ -1.01
USP49-205ENST00000448078 ARHGEF15O94989 841 aa8.73□□□□□ -1.01
USP49-205ENST00000448078 ELOA3BQ3SY89 546 aa8.73□□□□□ -1.01
USP49-205ENST00000448078 FCHSD1Q86WN1 690 aa8.73□□□□□ -1.01
USP49-205ENST00000448078 ELOA3Q8NG57 546 aa8.73□□□□□ -1.01
USP49-205ENST00000448078 GPR152Q8TDT2 470 aa8.73□□□□□ -1.01
USP49-205ENST00000448078 ANO2Q9NQ90 1003 aa8.73□□□□□ -1.01
USP49-205ENST00000448078 PPP1R1BQ9UD71 204 aaPredicted RBP8.73□□□□□ -1.01
USP49-205ENST00000448078 HCN2Q9UL51 889 aa8.73□□□□□ -1.01
USP49-205ENST00000448078 FNDC3AQ9Y2H6 1198 aaKnown RBP8.73□□□□□ -1.01
USP49-205ENST00000448078 PIK3R2O00459 728 aa8.72□□□□□ -1.01
USP49-205ENST00000448078 IRS1P35568 1242 aa8.72□□□□□ -1.01
USP49-205ENST00000448078 ADH7P40394 386 aa8.72□□□□□ -1.01
USP49-205ENST00000448078 VPS72Q15906 364 aa8.72□□□□□ -1.01
USP49-205ENST00000448078 NBPF8Q3BBV2 869 aa8.72□□□□□ -1.01
USP49-205ENST00000448078 CHSY3Q70JA7 882 aa8.72□□□□□ -1.01
USP49-205ENST00000448078 HELQQ8TDG4 1101 aa8.72□□□□□ -1.01
USP49-205ENST00000448078 DMGDHQ9UI17 866 aaKnown RBP8.72□□□□□ -1.01
USP49-205ENST00000448078 MKL2Q9ULH7 1088 aa8.72□□□□□ -1.01
USP49-205ENST00000448078 NUP155O75694 1391 aa8.72□□□□□ -1.01
USP49-205ENST00000448078 PTPRUQ92729 1446 aa8.71□□□□□ -1.01
USP49-205ENST00000448078 MTMR3Q13615 1198 aa8.71□□□□□ -1.02
USP49-205ENST00000448078 R3HDM1Q15032 1099 aaKnown RBP8.71□□□□□ -1.02
USP49-205ENST00000448078 C1orf229Q6ZS94 237 aaPredicted RBP8.71□□□□□ -1.02
USP49-205ENST00000448078 BTBD6Q96KE9 485 aa8.71□□□□□ -1.02
USP49-205ENST00000448078 GSX2Q9BZM3 304 aa8.71□□□□□ -1.02
USP49-205ENST00000448078 CNTNAP5Q8WYK1 1306 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms