RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 SCARF1Q14162 830 aa31.03■■■□□ 2.56
UFD1-204ENST00000447868 ATP2B3Q16720 1220 aa31.03■■■□□ 2.56
UFD1-204ENST00000447868 CDC37L1Q7L3B6 337 aa31.02■■■□□ 2.56
UFD1-204ENST00000447868 USP48Q86UV5 1035 aa31.02■■■□□ 2.56
UFD1-204ENST00000447868 DCPSQ96C86 337 aaKnown RBP31.02■■■□□ 2.56
UFD1-204ENST00000447868 GGA3Q9NZ52 723 aa31.02■■■□□ 2.56
UFD1-204ENST00000447868 HDAC9Q9UKV0 1011 aa31.02■■■□□ 2.56
UFD1-204ENST00000447868 POLR2AP24928 1970 aaKnown RBP31.02■■■□□ 2.56
UFD1-204ENST00000447868 F8W031 263 aaPredicted RBP31.01■■■□□ 2.55
UFD1-204ENST00000447868 FRAT2O75474 233 aaPredicted RBP31.01■■■□□ 2.55
UFD1-204ENST00000447868 COG6Q9Y2V7 657 aa31.01■■■□□ 2.55
UFD1-204ENST00000447868 FAM205AQ6ZU69 1335 aa31■■■□□ 2.55
UFD1-204ENST00000447868 ATP8B2P98198 1209 aa31■■■□□ 2.55
UFD1-204ENST00000447868 MVPQ14764 893 aaKnown RBP31■■■□□ 2.55
UFD1-204ENST00000447868 TRPM7Q96QT4 1865 aa30.99■■■□□ 2.55
UFD1-204ENST00000447868 FKBP1AP62942 108 aaKnown RBP30.99■■■□□ 2.55
UFD1-204ENST00000447868 TFCP2Q12800 502 aa30.99■■■□□ 2.55
UFD1-204ENST00000447868 CHAF1AQ13111 956 aaPredicted RBP30.99■■■□□ 2.55
UFD1-204ENST00000447868 KRT26Q7Z3Y9 468 aa30.99■■■□□ 2.55
UFD1-204ENST00000447868 KLRG1Q96E93 195 aa30.99■■■□□ 2.55
UFD1-204ENST00000447868 POLA2Q14181 598 aa30.98■■■□□ 2.55
UFD1-204ENST00000447868 NBPF9Q3BBW0 867 aa30.98■■■□□ 2.55
UFD1-204ENST00000447868 MFSD14BQ5SR56 506 aa30.98■■■□□ 2.55
UFD1-204ENST00000447868 ANGEL2Q5VTE6 544 aaKnown RBP30.98■■■□□ 2.55
UFD1-204ENST00000447868 DLK2Q6UY11 383 aa30.98■■■□□ 2.55
UFD1-204ENST00000447868 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.98■■■□□ 2.55
UFD1-204ENST00000447868 ADM5C9JUS6 153 aa30.97■■■□□ 2.55
UFD1-204ENST00000447868 G3BP1Q13283 466 aaKnown RBP eCLIP30.97■■■□□ 2.55
UFD1-204ENST00000447868 ZNF408Q9H9D4 720 aa30.97■■■□□ 2.55
UFD1-204ENST00000447868 MMP14P50281 582 aa30.96■■■□□ 2.55
UFD1-204ENST00000447868 SSH3Q8TE77 659 aa30.96■■■□□ 2.55
UFD1-204ENST00000447868 MKRN1Q9UHC7 482 aaKnown RBP30.96■■■□□ 2.55
UFD1-204ENST00000447868 DDX19BQ9UMR2 479 aa30.96■■■□□ 2.55
UFD1-204ENST00000447868 CELF2O95319 508 aaKnown RBP30.95■■■□□ 2.55
UFD1-204ENST00000447868 C20orf194Q5TEA3 1177 aa30.95■■■□□ 2.55
UFD1-204ENST00000447868 CST9Q5W186 159 aa30.95■■■□□ 2.55
UFD1-204ENST00000447868 SULF1Q8IWU6 871 aa30.95■■■□□ 2.55
UFD1-204ENST00000447868 ABT1Q9ULW3 272 aaKnown RBP30.95■■■□□ 2.55
UFD1-204ENST00000447868 WNT10BO00744 389 aa30.94■■■□□ 2.54
UFD1-204ENST00000447868 ADORA1P30542 326 aa30.94■■■□□ 2.54
UFD1-204ENST00000447868 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.94■■■□□ 2.54
UFD1-204ENST00000447868 ARAP2Q8WZ64 1704 aa30.93■■■□□ 2.54
UFD1-204ENST00000447868 MYH13Q9UKX3 1938 aa30.93■■■□□ 2.54
UFD1-204ENST00000447868 TIMM10P62072 90 aa30.93■■■□□ 2.54
UFD1-204ENST00000447868 CEP85Q6P2H3 762 aa30.93■■■□□ 2.54
UFD1-204ENST00000447868 SCAF8Q9UPN6 1271 aaKnown RBP30.93■■■□□ 2.54
UFD1-204ENST00000447868 AKAP2Q9Y2D5 859 aa30.93■■■□□ 2.54
UFD1-204ENST00000447868 OS9Q13438 667 aaPredicted RBP30.92■■■□□ 2.54
UFD1-204ENST00000447868 DLGAP5Q15398 846 aa30.92■■■□□ 2.54
UFD1-204ENST00000447868 TTF2Q9UNY4 1162 aaKnown RBP30.92■■■□□ 2.54
UFD1-204ENST00000447868 PCDHAC2Q9Y5I4 1007 aa30.92■■■□□ 2.54
UFD1-204ENST00000447868 A0A1B0GUL7 405 aa30.91■■■□□ 2.54
UFD1-204ENST00000447868 SURF6O75683 361 aaKnown RBP30.91■■■□□ 2.54
UFD1-204ENST00000447868 PDE3AQ14432 1141 aa30.91■■■□□ 2.54
UFD1-204ENST00000447868 PHKA1P46020 1223 aa30.9■■■□□ 2.54
UFD1-204ENST00000447868 RBM5P52756 815 aaKnown RBP eCLIP30.9■■■□□ 2.54
UFD1-204ENST00000447868 CFAP100Q494V2 611 aa30.9■■■□□ 2.54
UFD1-204ENST00000447868 TBC1D22AQ8WUA7 517 aa30.9■■■□□ 2.54
UFD1-204ENST00000447868 NEUROD6Q96NK8 337 aa30.9■■■□□ 2.54
UFD1-204ENST00000447868 GNL3LQ9NVN8 582 aaKnown RBP30.9■■■□□ 2.54
UFD1-204ENST00000447868 PITPNM2Q9BZ72 1349 aa30.9■■■□□ 2.54
UFD1-204ENST00000447868 GRIK5Q16478 980 aa30.89■■■□□ 2.54
UFD1-204ENST00000447868 ZBED3Q96IU2 234 aaPredicted RBP30.89■■■□□ 2.54
UFD1-204ENST00000447868 CNTNAP1P78357 1384 aa30.89■■■□□ 2.54
UFD1-204ENST00000447868 XAGE2Q96GT9 111 aa30.88■■■□□ 2.53
UFD1-204ENST00000447868 ZBTB40Q9NUA8 1239 aa30.88■■■□□ 2.53
UFD1-204ENST00000447868 COL1A1P02452 1464 aaPredicted RBP30.88■■■□□ 2.53
UFD1-204ENST00000447868 CCDC102BQ68D86 513 aa30.87■■■□□ 2.53
UFD1-204ENST00000447868 MTMR14Q8NCE2 650 aa30.87■■■□□ 2.53
UFD1-204ENST00000447868 CDCA5Q96FF9 252 aa30.86■■■□□ 2.53
UFD1-204ENST00000447868 CHMP4BQ9H444 224 aaKnown RBP30.86■■■□□ 2.53
UFD1-204ENST00000447868 SPDYE2BA6NHP3 402 aa30.85■■■□□ 2.53
UFD1-204ENST00000447868 SPDYE6P0CI01 402 aa30.85■■■□□ 2.53
UFD1-204ENST00000447868 DEFB115Q30KQ5 88 aa30.85■■■□□ 2.53
UFD1-204ENST00000447868 PRMT6Q96LA8 375 aaPredicted RBP30.85■■■□□ 2.53
UFD1-204ENST00000447868 NOP58Q9Y2X3 529 aaKnown RBP30.85■■■□□ 2.53
UFD1-204ENST00000447868 TLL2Q9Y6L7 1015 aa30.85■■■□□ 2.53
UFD1-204ENST00000447868 RASSF10A6NK89 507 aa30.84■■■□□ 2.53
UFD1-204ENST00000447868 WDR66Q8TBY9 1149 aa30.84■■■□□ 2.53
UFD1-204ENST00000447868 GORABQ5T7V8 394 aa30.83■■■□□ 2.53
UFD1-204ENST00000447868 PAXIP1Q6ZW49 1069 aaPredicted RBP30.83■■■□□ 2.53
UFD1-204ENST00000447868 SERPINA10Q9UK55 444 aa30.83■■■□□ 2.53
UFD1-204ENST00000447868 DENND2AQ9ULE3 1009 aa30.83■■■□□ 2.53
UFD1-204ENST00000447868 ECM29Q5VYK3 1845 aa30.82■■■□□ 2.52
UFD1-204ENST00000447868 AOX1Q06278 1338 aa30.82■■■□□ 2.52
UFD1-204ENST00000447868 CLRN2A0PK11 232 aa30.82■■■□□ 2.52
UFD1-204ENST00000447868 SEMA3EO15041 775 aa30.82■■■□□ 2.52
UFD1-204ENST00000447868 MYO1BO43795 1136 aa30.82■■■□□ 2.52
UFD1-204ENST00000447868 CRKP46108 304 aa30.82■■■□□ 2.52
UFD1-204ENST00000447868 VEGFBP49765 207 aa30.82■■■□□ 2.52
UFD1-204ENST00000447868 PRAMEF18Q5VWM3 479 aa30.82■■■□□ 2.52
UFD1-204ENST00000447868 APOBEC3FQ8IUX4 373 aaKnown RBP30.82■■■□□ 2.52
UFD1-204ENST00000447868 JMYQ8N9B5 988 aa30.82■■■□□ 2.52
UFD1-204ENST00000447868 SAPCD2Q86UD0 394 aa30.81■■■□□ 2.52
UFD1-204ENST00000447868 RPAP2Q8IXW5 612 aaPredicted RBP30.81■■■□□ 2.52
UFD1-204ENST00000447868 EXOC6BQ9Y2D4 811 aa30.81■■■□□ 2.52
UFD1-204ENST00000447868 TNNI3KQ59H18 835 aa30.8■■■□□ 2.52
UFD1-204ENST00000447868 VEZTQ9HBM0 779 aa30.8■■■□□ 2.52
UFD1-204ENST00000447868 GBA2Q9HCG7 927 aaPredicted RBP30.8■■■□□ 2.52
UFD1-204ENST00000447868 SUGT1Q9Y2Z0 365 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 335.3 ms