RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 KCNG4Q8TDN1 519 aa22.25■■□□□ 1.15
SDCBP-204ENST00000447182 POLR3EQ9NVU0 708 aa22.25■■□□□ 1.15
SDCBP-204ENST00000447182 NAP1L2Q9ULW6 460 aaPredicted RBP22.25■■□□□ 1.15
SDCBP-204ENST00000447182 ADAMTSL3P82987 1691 aa22.24■■□□□ 1.15
SDCBP-204ENST00000447182 M0R2C6 588 aa22.24■■□□□ 1.15
SDCBP-204ENST00000447182 LRRFIP1Q32MZ4 808 aaKnown RBP22.24■■□□□ 1.15
SDCBP-204ENST00000447182 FILIP1Q7Z7B0 1213 aa22.24■■□□□ 1.15
SDCBP-204ENST00000447182 CCAR2Q8N163 923 aaKnown RBP22.24■■□□□ 1.15
SDCBP-204ENST00000447182 SDF4Q9BRK5 362 aa22.24■■□□□ 1.15
SDCBP-204ENST00000447182 KIAA1468Q9P260 1216 aa22.24■■□□□ 1.15
SDCBP-204ENST00000447182 A0A1B0GUL7 405 aa22.24■■□□□ 1.15
SDCBP-204ENST00000447182 CHST3Q7LGC8 479 aa22.24■■□□□ 1.15
SDCBP-204ENST00000447182 RGS22Q8NE09 1264 aa22.24■■□□□ 1.15
SDCBP-204ENST00000447182 NWD2Q9ULI1 1742 aa22.23■■□□□ 1.15
SDCBP-204ENST00000447182 KIF2AO00139 706 aaPredicted RBP22.23■■□□□ 1.15
SDCBP-204ENST00000447182 DHX16O60231 1041 aaKnown RBP22.23■■□□□ 1.15
SDCBP-204ENST00000447182 LRRC24Q50LG9 513 aa22.23■■□□□ 1.15
SDCBP-204ENST00000447182 TTLL5Q6EMB2 1281 aa22.23■■□□□ 1.15
SDCBP-204ENST00000447182 BRAPQ7Z569 592 aa22.23■■□□□ 1.15
SDCBP-204ENST00000447182 NBPF11Q86T75 865 aa22.23■■□□□ 1.15
SDCBP-204ENST00000447182 CCDC191Q8NCU4 936 aa22.23■■□□□ 1.15
SDCBP-204ENST00000447182 OSBP2Q969R2 916 aa22.23■■□□□ 1.15
SDCBP-204ENST00000447182 NEDD4P46934 1319 aa22.23■■□□□ 1.15
SDCBP-204ENST00000447182 A0A087WWV3 80 aa22.22■■□□□ 1.15
SDCBP-204ENST00000447182 NDUFA8P51970 172 aa22.22■■□□□ 1.15
SDCBP-204ENST00000447182 DDX60Q8IY21 1712 aaKnown RBP22.22■■□□□ 1.15
SDCBP-204ENST00000447182 A0A1B0GVL5 298 aa22.22■■□□□ 1.15
SDCBP-204ENST00000447182 ZFYP08048 801 aaPredicted RBP22.22■■□□□ 1.15
SDCBP-204ENST00000447182 CSB-PGBD3P0DP91 1061 aa22.22■■□□□ 1.15
SDCBP-204ENST00000447182 FBXO18Q8NFZ0 1043 aa22.22■■□□□ 1.15
SDCBP-204ENST00000447182 ZNF592Q92610 1267 aa22.22■■□□□ 1.15
SDCBP-204ENST00000447182 DHX8Q14562 1220 aaKnown RBP22.21■■□□□ 1.15
SDCBP-204ENST00000447182 STK38Q15208 465 aa22.21■■□□□ 1.15
SDCBP-204ENST00000447182 C8orf76Q96K31 380 aa22.21■■□□□ 1.15
SDCBP-204ENST00000447182 DDX41Q9UJV9 622 aaKnown RBP22.21■■□□□ 1.15
SDCBP-204ENST00000447182 FOXP2O15409 715 aa22.21■■□□□ 1.15
SDCBP-204ENST00000447182 IMMTQ16891 758 aaKnown RBP22.21■■□□□ 1.15
SDCBP-204ENST00000447182 TTLL7Q6ZT98 887 aa22.21■■□□□ 1.15
SDCBP-204ENST00000447182 C19orf44Q9H6X5 657 aa22.21■■□□□ 1.15
SDCBP-204ENST00000447182 CLIC4Q9Y696 253 aa22.21■■□□□ 1.15
SDCBP-204ENST00000447182 SPTLC2O15270 562 aa22.2■■□□□ 1.14
SDCBP-204ENST00000447182 PPFIA3O75145 1194 aa22.2■■□□□ 1.14
SDCBP-204ENST00000447182 NAA30Q147X3 362 aaPredicted RBP22.2■■□□□ 1.14
SDCBP-204ENST00000447182 SF3A1Q15459 793 aaKnown RBP22.2■■□□□ 1.14
SDCBP-204ENST00000447182 ERCC4Q92889 916 aaPredicted RBP22.2■■□□□ 1.14
SDCBP-204ENST00000447182 UBR2Q8IWV8 1755 aa22.2■■□□□ 1.14
SDCBP-204ENST00000447182 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.19■■□□□ 1.14
SDCBP-204ENST00000447182 KIF20AO95235 890 aa22.19■■□□□ 1.14
SDCBP-204ENST00000447182 KCNJ6P48051 423 aa22.19■■□□□ 1.14
SDCBP-204ENST00000447182 DPCR1Q3MIW9 517 aa22.19■■□□□ 1.14
SDCBP-204ENST00000447182 MYSM1Q5VVJ2 828 aa22.19■■□□□ 1.14
SDCBP-204ENST00000447182 MB21D2Q8IYB1 491 aaPredicted RBP22.19■■□□□ 1.14
SDCBP-204ENST00000447182 KIF18AQ8NI77 898 aa22.19■■□□□ 1.14
SDCBP-204ENST00000447182 ZNF594Q96JF6 807 aaPredicted RBP22.19■■□□□ 1.14
SDCBP-204ENST00000447182 FBXO3Q9UK99 471 aa22.19■■□□□ 1.14
SDCBP-204ENST00000447182 HPS5Q9UPZ3 1129 aa22.19■■□□□ 1.14
SDCBP-204ENST00000447182 WDR19Q8NEZ3 1342 aa22.19■■□□□ 1.14
SDCBP-204ENST00000447182 ZRSR1Q15695 479 aaKnown RBP22.19■■□□□ 1.14
SDCBP-204ENST00000447182 PROSER2Q86WR7 435 aaPredicted RBP22.19■■□□□ 1.14
SDCBP-204ENST00000447182 CCDC150Q8NCX0 1101 aa22.19■■□□□ 1.14
SDCBP-204ENST00000447182 GPHNQ9NQX3 736 aaPredicted RBP22.19■■□□□ 1.14
SDCBP-204ENST00000447182 ERO1AQ96HE7 468 aa22.18■■□□□ 1.14
SDCBP-204ENST00000447182 CEP126Q9P2H0 1117 aa22.18■■□□□ 1.14
SDCBP-204ENST00000447182 ZNF215Q9UL58 517 aaPredicted RBP22.18■■□□□ 1.14
SDCBP-204ENST00000447182 PRC1O43663 620 aa22.18■■□□□ 1.14
SDCBP-204ENST00000447182 NLRP12P59046 1061 aa22.18■■□□□ 1.14
SDCBP-204ENST00000447182 CCDC158Q5M9N0 1113 aa22.18■■□□□ 1.14
SDCBP-204ENST00000447182 ORC3Q9UBD5 711 aaPredicted RBP22.18■■□□□ 1.14
SDCBP-204ENST00000447182 MORC2Q9Y6X9 1032 aaPredicted RBP22.18■■□□□ 1.14
SDCBP-204ENST00000447182 ABCC12Q96J65 1359 aa22.17■■□□□ 1.14
SDCBP-204ENST00000447182 FGAP02671 866 aa22.17■■□□□ 1.14
SDCBP-204ENST00000447182 SLC3A2P08195 630 aaKnown RBP22.17■■□□□ 1.14
SDCBP-204ENST00000447182 OTUD7BQ6GQQ9 843 aa22.17■■□□□ 1.14
SDCBP-204ENST00000447182 ZNF397Q8NF99 534 aaPredicted RBP22.17■■□□□ 1.14
SDCBP-204ENST00000447182 PUS3Q9BZE2 481 aaKnown RBP22.17■■□□□ 1.14
SDCBP-204ENST00000447182 TRMT1Q9NXH9 659 aaKnown RBP22.17■■□□□ 1.14
SDCBP-204ENST00000447182 KLF18A0A0U1RQI7 1052 aa22.16■■□□□ 1.14
SDCBP-204ENST00000447182 ZNF202O95125 648 aa22.16■■□□□ 1.14
SDCBP-204ENST00000447182 POLR3DP05423 398 aaPredicted RBP22.16■■□□□ 1.14
SDCBP-204ENST00000447182 CMA1P23946 247 aa22.16■■□□□ 1.14
SDCBP-204ENST00000447182 AKAP2Q9Y2D5 859 aa22.16■■□□□ 1.14
SDCBP-204ENST00000447182 PSDA5PKW4 1024 aaPredicted RBP22.16■■□□□ 1.14
SDCBP-204ENST00000447182 GOLGA8BA8MQT2 603 aa22.16■■□□□ 1.14
SDCBP-204ENST00000447182 FKBP4Q02790 459 aaKnown RBP eCLIP22.16■■□□□ 1.14
SDCBP-204ENST00000447182 AXDND1Q5T1B0 1012 aaPredicted RBP22.16■■□□□ 1.14
SDCBP-204ENST00000447182 NCOA7Q8NI08 942 aa22.16■■□□□ 1.14
SDCBP-204ENST00000447182 XPO4Q9C0E2 1151 aaKnown RBP22.16■■□□□ 1.14
SDCBP-204ENST00000447182 ZHX1Q9UKY1 873 aaPredicted RBP22.16■■□□□ 1.14
SDCBP-204ENST00000447182 ANTXR2P58335 489 aa22.15■■□□□ 1.14
SDCBP-204ENST00000447182 TPM4P67936 248 aa22.15■■□□□ 1.14
SDCBP-204ENST00000447182 ANO1Q5XXA6 986 aa22.15■■□□□ 1.14
SDCBP-204ENST00000447182 SYNE3Q6ZMZ3 975 aa22.15■■□□□ 1.14
SDCBP-204ENST00000447182 APPBP2Q92624 585 aa22.15■■□□□ 1.14
SDCBP-204ENST00000447182 TUBB4AP04350 444 aa22.15■■□□□ 1.14
SDCBP-204ENST00000447182 KIF23Q02241 960 aaPredicted RBP22.15■■□□□ 1.14
SDCBP-204ENST00000447182 NCAPHQ15003 741 aa22.15■■□□□ 1.14
SDCBP-204ENST00000447182 TTC39AQ5SRH9 613 aa22.15■■□□□ 1.14
SDCBP-204ENST00000447182 E4F1Q66K89 784 aaPredicted RBP22.15■■□□□ 1.14
SDCBP-204ENST00000447182 TIGD1Q96MW7 591 aa22.15■■□□□ 1.14
SDCBP-204ENST00000447182 IFNKQ9P0W0 207 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms