RNA–Protein interactions for RNA: ENST00000447132.5

NIFK-203, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-203ENST00000447132 CCNJLQ8IV13 435 aa7.56□□□□□ -1.2
NIFK-203ENST00000447132 MEGF10Q96KG7 1140 aa7.56□□□□□ -1.2
NIFK-203ENST00000447132 CARD10Q9BWT7 1032 aa7.56□□□□□ -1.2
NIFK-203ENST00000447132 NIF3L1Q9GZT8 377 aa7.56□□□□□ -1.2
NIFK-203ENST00000447132 SOX17Q9H6I2 414 aaPredicted RBP7.56□□□□□ -1.2
NIFK-203ENST00000447132 DCTN4Q9UJW0 460 aa7.56□□□□□ -1.2
NIFK-203ENST00000447132 C19orf57Q0VDD7 668 aa7.55□□□□□ -1.2
NIFK-203ENST00000447132 ORC1Q13415 861 aa7.55□□□□□ -1.2
NIFK-203ENST00000447132 IKBKEQ14164 716 aa7.55□□□□□ -1.2
NIFK-203ENST00000447132 DUOXA2Q1HG44 320 aa7.55□□□□□ -1.2
NIFK-203ENST00000447132 USPL1Q5W0Q7 1092 aa7.55□□□□□ -1.2
NIFK-203ENST00000447132 ASAP3Q8TDY4 903 aa7.55□□□□□ -1.2
NIFK-203ENST00000447132 BIN2Q9UBW5 565 aaPredicted RBP7.55□□□□□ -1.2
NIFK-203ENST00000447132 A0A096LPE4 126 aa7.54□□□□□ -1.2
NIFK-203ENST00000447132 A0A1W2PPZ6 126 aa7.54□□□□□ -1.2
NIFK-203ENST00000447132 EIF1AYO14602 144 aaKnown RBP7.54□□□□□ -1.2
NIFK-203ENST00000447132 GPR182O15218 404 aa7.54□□□□□ -1.2
NIFK-203ENST00000447132 DDX3YO15523 660 aaKnown RBP7.54□□□□□ -1.2
NIFK-203ENST00000447132 ADAM11O75078 769 aa7.54□□□□□ -1.2
NIFK-203ENST00000447132 KIAA1211Q6ZU35 1233 aa7.54□□□□□ -1.2
NIFK-203ENST00000447132 FOXD4L4Q8WXT5 416 aaPredicted RBP7.54□□□□□ -1.2
NIFK-203ENST00000447132 TCF12Q99081 682 aa7.54□□□□□ -1.2
NIFK-203ENST00000447132 LIN7BQ9HAP6 207 aa7.54□□□□□ -1.2
NIFK-203ENST00000447132 PATL2C9JE40 543 aaKnown RBP7.53□□□□□ -1.2
NIFK-203ENST00000447132 WISP1O95388 367 aa7.53□□□□□ -1.2
NIFK-203ENST00000447132 ESRRAP11474 423 aaPredicted RBP7.53□□□□□ -1.2
NIFK-203ENST00000447132 ACAD11Q709F0 780 aa7.53□□□□□ -1.2
NIFK-203ENST00000447132 SLC51AQ86UW1 340 aa7.53□□□□□ -1.2
NIFK-203ENST00000447132 AGGF1Q8N302 714 aaeCLIP7.53□□□□□ -1.2
NIFK-203ENST00000447132 SLC7A3Q8WY07 619 aa7.53□□□□□ -1.2
NIFK-203ENST00000447132 CCDC74AQ96AQ1 378 aa7.53□□□□□ -1.2
NIFK-203ENST00000447132 CSRNP1Q96S65 589 aa7.53□□□□□ -1.2
NIFK-203ENST00000447132 CEP41Q9BYV8 373 aa7.53□□□□□ -1.2
NIFK-203ENST00000447132 MEGF11A6BM72 1044 aa7.52□□□□□ -1.21
NIFK-203ENST00000447132 PRSS36Q5K4E3 855 aa7.52□□□□□ -1.21
NIFK-203ENST00000447132 PRR23CQ6ZRP0 262 aa7.52□□□□□ -1.21
NIFK-203ENST00000447132 TMC7Q7Z402 723 aa7.52□□□□□ -1.21
NIFK-203ENST00000447132 UBL7Q96S82 380 aaPredicted RBP7.52□□□□□ -1.21
NIFK-203ENST00000447132 IVNS1ABPQ9Y6Y0 642 aa7.52□□□□□ -1.21
NIFK-203ENST00000447132 METTL12A8MUP2 240 aa7.51□□□□□ -1.21
NIFK-203ENST00000447132 PDIA4P13667 645 aaKnown RBP7.51□□□□□ -1.21
NIFK-203ENST00000447132 GLB1P16278 677 aa7.51□□□□□ -1.21
NIFK-203ENST00000447132 GRIA4P48058 902 aa7.51□□□□□ -1.21
NIFK-203ENST00000447132 PLCB3Q01970 1234 aa7.51□□□□□ -1.21
NIFK-203ENST00000447132 DSC3Q14574 896 aa7.51□□□□□ -1.21
NIFK-203ENST00000447132 HGSNATQ68CP4 663 aa7.51□□□□□ -1.21
NIFK-203ENST00000447132 EHD4Q9H223 541 aa7.51□□□□□ -1.21
NIFK-203ENST00000447132 CLEC4MQ9H2X3 399 aaPredicted RBP7.51□□□□□ -1.21
NIFK-203ENST00000447132 PTPN12Q05209 780 aaKnown RBP7.5□□□□□ -1.21
NIFK-203ENST00000447132 SPRED3Q2MJR0 410 aa7.5□□□□□ -1.21
NIFK-203ENST00000447132 UVSSAQ2YD98 709 aa7.5□□□□□ -1.21
NIFK-203ENST00000447132 NPM2Q86SE8 214 aaKnown RBP7.5□□□□□ -1.21
NIFK-203ENST00000447132 UBASH3BQ8TF42 649 aa7.5□□□□□ -1.21
NIFK-203ENST00000447132 RNF208Q9H0X6 261 aa7.5□□□□□ -1.21
NIFK-203ENST00000447132 NPHS2Q9NP85 383 aa7.5□□□□□ -1.21
NIFK-203ENST00000447132 TREHO43280 583 aa7.49□□□□□ -1.21
NIFK-203ENST00000447132 ITPKAP23677 461 aa7.49□□□□□ -1.21
NIFK-203ENST00000447132 MAPK1P28482 360 aa7.49□□□□□ -1.21
NIFK-203ENST00000447132 NLRP12P59046 1061 aa7.49□□□□□ -1.21
NIFK-203ENST00000447132 PCDH1Q08174 1060 aa7.49□□□□□ -1.21
NIFK-203ENST00000447132 ZNF423Q2M1K9 1284 aa7.49□□□□□ -1.21
NIFK-203ENST00000447132 FAM46AQ96IP4 442 aaKnown RBP7.49□□□□□ -1.21
NIFK-203ENST00000447132 EXOSC6Q5RKV6 272 aaKnown RBP7.48□□□□□ -1.21
NIFK-203ENST00000447132 ANKRD34AQ69YU3 496 aa7.48□□□□□ -1.21
NIFK-203ENST00000447132 PRPF40BQ6NWY9 871 aaKnown RBP7.48□□□□□ -1.21
NIFK-203ENST00000447132 ZSCAN29Q8IWY8 852 aaPredicted RBP7.48□□□□□ -1.21
NIFK-203ENST00000447132 RUSC1Q9BVN2 902 aa7.48□□□□□ -1.21
NIFK-203ENST00000447132 PPP4R2Q9NY27 417 aa7.48□□□□□ -1.21
NIFK-203ENST00000447132 TRAK1Q9UPV9 953 aa7.48□□□□□ -1.21
NIFK-203ENST00000447132 DHX15O43143 795 aaKnown RBP7.47□□□□□ -1.21
NIFK-203ENST00000447132 GADD45BO75293 160 aaPredicted RBP7.47□□□□□ -1.21
NIFK-203ENST00000447132 GSTM4Q03013 218 aa7.47□□□□□ -1.21
NIFK-203ENST00000447132 ARMC10Q8N2F6 343 aa7.47□□□□□ -1.21
NIFK-203ENST00000447132 DDX54Q8TDD1 881 aaKnown RBP7.47□□□□□ -1.21
NIFK-203ENST00000447132 TMPRSS13Q9BYE2 586 aa7.47□□□□□ -1.21
NIFK-203ENST00000447132 ZFYVE1Q9HBF4 777 aa7.47□□□□□ -1.21
NIFK-203ENST00000447132 RAXQ9Y2V3 346 aa7.47□□□□□ -1.21
NIFK-203ENST00000447132 LOC100289279A0A1B0GTE1 492 aa7.46□□□□□ -1.22
NIFK-203ENST00000447132 TMEM238LA0A1B0GVL6 79 aa7.46□□□□□ -1.22
NIFK-203ENST00000447132 RPS26P11Q5JNZ5 115 aaPredicted RBP7.46□□□□□ -1.22
NIFK-203ENST00000447132 ZMYM1Q5SVZ6 1142 aa7.46□□□□□ -1.22
NIFK-203ENST00000447132 SMG8Q8ND04 991 aaKnown RBP7.46□□□□□ -1.22
NIFK-203ENST00000447132 EPS8L3Q8TE67 593 aaKnown RBP7.46□□□□□ -1.22
NIFK-203ENST00000447132 ZNF576Q9H609 170 aa7.46□□□□□ -1.22
NIFK-203ENST00000447132 SUGCTQ9HAC7 445 aa7.46□□□□□ -1.22
NIFK-203ENST00000447132 NLRP2Q9NX02 1062 aa7.46□□□□□ -1.22
NIFK-203ENST00000447132 SART1O43290 800 aaKnown RBP7.45□□□□□ -1.22
NIFK-203ENST00000447132 B3GALT4O96024 378 aa7.45□□□□□ -1.22
NIFK-203ENST00000447132 CYP11A1P05108 521 aa7.45□□□□□ -1.22
NIFK-203ENST00000447132 ENOX2Q16206 610 aaKnown RBP7.45□□□□□ -1.22
NIFK-203ENST00000447132 NUTM2GQ5VZR2 741 aa7.45□□□□□ -1.22
NIFK-203ENST00000447132 GLIS3Q8NEA6 775 aa7.45□□□□□ -1.22
NIFK-203ENST00000447132 MYRFLQ96LU7 910 aa7.45□□□□□ -1.22
NIFK-203ENST00000447132 ASB16Q96NS5 453 aa7.45□□□□□ -1.22
NIFK-203ENST00000447132 NRSN2Q9GZP1 204 aa7.45□□□□□ -1.22
NIFK-203ENST00000447132 CYP4F12Q9HCS2 524 aa7.45□□□□□ -1.22
NIFK-203ENST00000447132 ABCB6Q9NP58 842 aa7.45□□□□□ -1.22
NIFK-203ENST00000447132 STOML1Q9UBI4 398 aa7.45□□□□□ -1.22
NIFK-203ENST00000447132 GSC2O15499 205 aa7.44□□□□□ -1.22
NIFK-203ENST00000447132 GRM2Q14416 872 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms