RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 LONRF3Q496Y0 759 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 LMBR1Q8WVP7 490 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 N4BP2L2Q92802 583 aaPredicted RBP8.89□□□□□ -0.99
SMG1-202ENST00000446231 ZRANB1Q9UGI0 708 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 KLF18A0A0U1RQI7 1052 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 ALS2CLQ60I27 953 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 ABCB6Q9NP58 842 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 ARID4AP29374 1257 aaPredicted RBP8.89□□□□□ -0.99
SMG1-202ENST00000446231 ADKP55263 362 aaKnown RBP8.89□□□□□ -0.99
SMG1-202ENST00000446231 ME3Q16798 604 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 RASAL2Q9UJF2 1139 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 OSBPL5Q9H0X9 879 aaPredicted RBP8.89□□□□□ -0.99
SMG1-202ENST00000446231 MXRA7P84157 204 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 KCNF1Q9H3M0 494 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 GSTTP1A0A1W2PQM5 241 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 CUTAO60888 179 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 SLF1Q9BQI6 1058 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 SLC26A6Q9BXS9 759 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 PTPDC1A2A3K4 754 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 RNASE9P60153 205 aaKnown RBP8.89□□□□□ -0.99
SMG1-202ENST00000446231 HAND2P61296 217 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 TPX2Q9ULW0 747 aaKnown RBP8.89□□□□□ -0.99
SMG1-202ENST00000446231 FAM169AQ9Y6X4 670 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 WWC2Q6AWC2 1192 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 GNL3LQ9NVN8 582 aaKnown RBP8.89□□□□□ -0.99
SMG1-202ENST00000446231 IFIT3O14879 490 aaKnown RBP8.88□□□□□ -0.99
SMG1-202ENST00000446231 STX17P56962 302 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 GOLGA8FQ08AF8 430 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 GOLGA8DPQ0D2H9 430 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 DDIT3P35638 169 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 CMA1P23946 247 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 HOOK3Q86VS8 718 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 TOP2BQ02880 1626 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 BMP15O95972 392 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 TRIM14Q14142 442 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 SELENOSQ9BQE4 189 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 FANCLQ9NW38 375 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 KIAA1468Q9P260 1216 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 CCDC151A5D8V7 595 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 GKAP1Q5VSY0 366 aaPredicted RBP8.88□□□□□ -0.99
SMG1-202ENST00000446231 TRIM7Q9C029 511 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 NME9Q86XW9 330 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 CACNA2D3Q8IZS8 1091 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.88□□□□□ -0.99
SMG1-202ENST00000446231 CATIPQ7Z7H3 387 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 CCDC77Q9BR77 488 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 NKIRAS1Q9NYS0 192 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 GNAT3A8MTJ3 354 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 METAP2P50579 478 aaKnown RBP eCLIP8.88□□□□□ -0.99
SMG1-202ENST00000446231 IFI16Q16666 785 aaKnown RBP8.88□□□□□ -0.99
SMG1-202ENST00000446231 TMEM67Q5HYA8 995 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 GUCY2FP51841 1108 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 RPGRIP1Q96KN7 1286 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 SUDS3Q9H7L9 328 aaPredicted RBP8.88□□□□□ -0.99
SMG1-202ENST00000446231 TROQ12816 1431 aaPredicted RBP8.88□□□□□ -0.99
SMG1-202ENST00000446231 GOLGA8AA7E2F4 631 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 ZBTB16Q05516 673 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 SRGAP1Q7Z6B7 1085 aa8.88□□□□□ -0.99
SMG1-202ENST00000446231 CTNNBL1Q8WYA6 563 aaPredicted RBP8.88□□□□□ -0.99
SMG1-202ENST00000446231 SEC62Q99442 399 aaKnown RBP8.88□□□□□ -0.99
SMG1-202ENST00000446231 SH2D4BQ5SQS7 431 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 OTUD7BQ6GQQ9 843 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 RUFY4Q6ZNE9 571 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 KIF3CO14782 793 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 CIB2O75838 187 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 MAP3K9P80192 1104 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 PSME1Q06323 249 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 SLC20A2Q08357 652 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 MLKLQ8NB16 471 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 E7EVH7 732 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 CCT6AP40227 531 aaKnown RBP8.87□□□□□ -0.99
SMG1-202ENST00000446231 IARSP41252 1262 aaKnown RBP8.87□□□□□ -0.99
SMG1-202ENST00000446231 FANCD2Q9BXW9 1451 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 ZBTB12Q9Y330 459 aaPredicted RBP8.87□□□□□ -0.99
SMG1-202ENST00000446231 DTNBO60941 627 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 ATP1A2P50993 1020 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 AMOTL1Q8IY63 956 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 BAIAP2L1Q9UHR4 511 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 MUM1L1Q5H9M0 696 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 A0A087WZG4 1122 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 BTBD11A6QL63 1104 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 ZBTB43O43298 467 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 TADA3O75528 432 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 ZNF365Q70YC5 407 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 TTC6Q86TZ1 520 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 SAR1BQ9Y6B6 198 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 TRIM75PA6NK02 468 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 CLTAP09496 248 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 MICU3Q86XE3 530 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 TBC1D31Q96DN5 1066 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 RNF40O75150 1001 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 KIF2CQ99661 725 aa8.87□□□□□ -0.99
SMG1-202ENST00000446231 TNNC1P63316 161 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 TRIM68Q6AZZ1 485 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 FCHSD1Q86WN1 690 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 AIDAQ96BJ3 306 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 PRPF4BQ13523 1007 aaKnown RBP8.86□□□□□ -0.99
SMG1-202ENST00000446231 RTN1Q16799 776 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 C6orf163Q5TEZ5 329 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 C14orf93Q9H972 538 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms