RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 UQCRFS1P1P0C7P4 283 aa16.67■□□□□ 0.26
NCLP1-201ENST00000445357 LEO1Q8WVC0 666 aaPredicted RBP16.67■□□□□ 0.26
NCLP1-201ENST00000445357 WDR19Q8NEZ3 1342 aa16.67■□□□□ 0.26
NCLP1-201ENST00000445357 PTPDC1A2A3K4 754 aa16.66■□□□□ 0.26
NCLP1-201ENST00000445357 H3BQV1 296 aa16.66■□□□□ 0.26
NCLP1-201ENST00000445357 PDIA3P30101 505 aaKnown RBP16.66■□□□□ 0.26
NCLP1-201ENST00000445357 UBE3CQ15386 1083 aa16.66■□□□□ 0.26
NCLP1-201ENST00000445357 PUM3Q15397 648 aaKnown RBP16.66■□□□□ 0.26
NCLP1-201ENST00000445357 IFFO2Q5TF58 517 aa16.66■□□□□ 0.26
NCLP1-201ENST00000445357 POTEAQ6S8J7 498 aa16.66■□□□□ 0.26
NCLP1-201ENST00000445357 MB21D2Q8IYB1 491 aaPredicted RBP16.66■□□□□ 0.26
NCLP1-201ENST00000445357 LPIN2Q92539 896 aa16.66■□□□□ 0.26
NCLP1-201ENST00000445357 SPATA32Q96LK8 384 aa16.66■□□□□ 0.26
NCLP1-201ENST00000445357 SPATA31A5Q5VU36 1347 aa16.66■□□□□ 0.26
NCLP1-201ENST00000445357 SPATA31A7Q8IWB4 1347 aa16.66■□□□□ 0.26
NCLP1-201ENST00000445357 RTL9Q8NET4 1388 aa16.66■□□□□ 0.26
NCLP1-201ENST00000445357 CRKLP46109 303 aaKnown RBP16.66■□□□□ 0.26
NCLP1-201ENST00000445357 MARCH10Q8NA82 808 aaPredicted RBP16.66■□□□□ 0.26
NCLP1-201ENST00000445357 DDX11Q96FC9 970 aa16.66■□□□□ 0.26
NCLP1-201ENST00000445357 NOL7Q9UMY1 257 aaKnown RBP16.66■□□□□ 0.26
NCLP1-201ENST00000445357 CAMTA2O94983 1202 aa16.65■□□□□ 0.26
NCLP1-201ENST00000445357 PARP10Q53GL7 1025 aa16.65■□□□□ 0.26
NCLP1-201ENST00000445357 SUSD4Q5VX71 490 aa16.65■□□□□ 0.26
NCLP1-201ENST00000445357 CCDC102BQ68D86 513 aa16.65■□□□□ 0.26
NCLP1-201ENST00000445357 C4AP0C0L4 1744 aa16.65■□□□□ 0.26
NCLP1-201ENST00000445357 C4BP0C0L5 1744 aa16.65■□□□□ 0.26
NCLP1-201ENST00000445357 CHD4Q14839 1912 aa16.65■□□□□ 0.26
NCLP1-201ENST00000445357 LOC102724428A0A0B4J2F2 783 aa16.64■□□□□ 0.25
NCLP1-201ENST00000445357 ADAMTS2O95450 1211 aa16.64■□□□□ 0.25
NCLP1-201ENST00000445357 ATP6V1AP38606 617 aa16.64■□□□□ 0.25
NCLP1-201ENST00000445357 SIK1P57059 783 aa16.64■□□□□ 0.25
NCLP1-201ENST00000445357 GIMAP6Q6P9H5 292 aa16.64■□□□□ 0.25
NCLP1-201ENST00000445357 BARGINQ6ZT62 677 aa16.64■□□□□ 0.25
NCLP1-201ENST00000445357 PIH1D3Q9NQM4 214 aaKnown RBP16.64■□□□□ 0.25
NCLP1-201ENST00000445357 CCDC39Q9UFE4 941 aa16.64■□□□□ 0.25
NCLP1-201ENST00000445357 A0A1B0GUL6 1792 aa16.64■□□□□ 0.25
NCLP1-201ENST00000445357 CASZ1Q86V15 1759 aa16.64■□□□□ 0.25
NCLP1-201ENST00000445357 HCLS1P14317 486 aaPredicted RBP16.64■□□□□ 0.25
NCLP1-201ENST00000445357 MCM5P33992 734 aa16.64■□□□□ 0.25
NCLP1-201ENST00000445357 PHKA1P46020 1223 aa16.64■□□□□ 0.25
NCLP1-201ENST00000445357 UTP14AQ9BVJ6 771 aaKnown RBP16.64■□□□□ 0.25
NCLP1-201ENST00000445357 LIG1P18858 919 aa16.63■□□□□ 0.25
NCLP1-201ENST00000445357 MSNP26038 577 aaKnown RBP16.63■□□□□ 0.25
NCLP1-201ENST00000445357 ITPK1Q13572 414 aa16.63■□□□□ 0.25
NCLP1-201ENST00000445357 SLC9C2Q5TAH2 1124 aa16.63■□□□□ 0.25
NCLP1-201ENST00000445357 NCOA7Q8NI08 942 aa16.63■□□□□ 0.25
NCLP1-201ENST00000445357 NUP62CLQ9H1M0 184 aa16.63■□□□□ 0.25
NCLP1-201ENST00000445357 DDX19AQ9NUU7 478 aaKnown RBP16.63■□□□□ 0.25
NCLP1-201ENST00000445357 TFIP11Q9UBB9 837 aaKnown RBP16.63■□□□□ 0.25
NCLP1-201ENST00000445357 CFAP45Q9UL16 551 aa16.63■□□□□ 0.25
NCLP1-201ENST00000445357 HAND2P61296 217 aa16.62■□□□□ 0.25
NCLP1-201ENST00000445357 CCT2P78371 535 aaKnown RBP16.62■□□□□ 0.25
NCLP1-201ENST00000445357 TPRNQ4KMQ1 711 aa16.62■□□□□ 0.25
NCLP1-201ENST00000445357 ATL3Q6DD88 541 aa16.62■□□□□ 0.25
NCLP1-201ENST00000445357 CHST3Q7LGC8 479 aa16.62■□□□□ 0.25
NCLP1-201ENST00000445357 CARMIL3Q8ND23 1372 aa16.62■□□□□ 0.25
NCLP1-201ENST00000445357 ZMYM6O95789 1325 aa16.62■□□□□ 0.25
NCLP1-201ENST00000445357 TCRBV5S4A2TA0A5A2 114 aa16.62■□□□□ 0.25
NCLP1-201ENST00000445357 GOLGA6L4A6NEF3 574 aa16.62■□□□□ 0.25
NCLP1-201ENST00000445357 ZNF213O14771 459 aa16.62■□□□□ 0.25
NCLP1-201ENST00000445357 PRC1O43663 620 aa16.62■□□□□ 0.25
NCLP1-201ENST00000445357 SLC5A1P13866 664 aa16.62■□□□□ 0.25
NCLP1-201ENST00000445357 PDE6AP16499 860 aa16.62■□□□□ 0.25
NCLP1-201ENST00000445357 ADD1P35611 737 aaKnown RBP16.62■□□□□ 0.25
NCLP1-201ENST00000445357 ANTXR2P58335 489 aa16.62■□□□□ 0.25
NCLP1-201ENST00000445357 RBM43Q6ZSC3 357 aaKnown RBP16.62■□□□□ 0.25
NCLP1-201ENST00000445357 ACSBG1Q96GR2 724 aa16.62■□□□□ 0.25
NCLP1-201ENST00000445357 NCOA5Q9HCD5 579 aaKnown RBP16.62■□□□□ 0.25
NCLP1-201ENST00000445357 ZKSCAN5Q9Y2L8 839 aa16.62■□□□□ 0.25
NCLP1-201ENST00000445357 TIAM2Q8IVF5 1701 aa16.61■□□□□ 0.25
NCLP1-201ENST00000445357 NTSR2O95665 410 aa16.61■□□□□ 0.25
NCLP1-201ENST00000445357 CCDC192P0DO97 292 aa16.61■□□□□ 0.25
NCLP1-201ENST00000445357 MAP3K11Q16584 847 aa16.61■□□□□ 0.25
NCLP1-201ENST00000445357 SMARCC1Q92922 1105 aaPredicted RBP16.61■□□□□ 0.25
NCLP1-201ENST00000445357 PGBD1Q96JS3 809 aa16.61■□□□□ 0.25
NCLP1-201ENST00000445357 C8orf37Q96NL8 207 aa16.61■□□□□ 0.25
NCLP1-201ENST00000445357 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.61■□□□□ 0.25
NCLP1-201ENST00000445357 ZNF532Q9HCE3 1301 aa16.6■□□□□ 0.25
NCLP1-201ENST00000445357 RALYLQ86SE5 291 aaKnown RBP16.6■□□□□ 0.25
NCLP1-201ENST00000445357 NBPF3Q9H094 633 aa16.6■□□□□ 0.25
NCLP1-201ENST00000445357 SOCS7O14512 581 aa16.6■□□□□ 0.25
NCLP1-201ENST00000445357 ZNF500O60304 480 aaPredicted RBP16.6■□□□□ 0.25
NCLP1-201ENST00000445357 IDH1O75874 414 aaKnown RBP16.6■□□□□ 0.25
NCLP1-201ENST00000445357 CCDC152Q4G0S7 254 aa16.6■□□□□ 0.25
NCLP1-201ENST00000445357 CLSTN2Q9H4D0 955 aa16.6■□□□□ 0.25
NCLP1-201ENST00000445357 GPHNQ9NQX3 736 aaPredicted RBP16.6■□□□□ 0.25
NCLP1-201ENST00000445357 DACT1Q9NYF0 836 aa16.6■□□□□ 0.25
NCLP1-201ENST00000445357 RCOR1Q9UKL0 485 aa16.6■□□□□ 0.25
NCLP1-201ENST00000445357 WWC3Q9ULE0 1092 aa16.6■□□□□ 0.25
NCLP1-201ENST00000445357 SCN7AQ01118 1682 aa16.59■□□□□ 0.25
NCLP1-201ENST00000445357 DHX16O60231 1041 aaKnown RBP16.59■□□□□ 0.25
NCLP1-201ENST00000445357 FDPSP14324 419 aaKnown RBP16.59■□□□□ 0.25
NCLP1-201ENST00000445357 ALX1Q15699 326 aa16.59■□□□□ 0.25
NCLP1-201ENST00000445357 SPATA5Q8NB90 893 aa16.59■□□□□ 0.25
NCLP1-201ENST00000445357 RGS22Q8NE09 1264 aa16.59■□□□□ 0.25
NCLP1-201ENST00000445357 MPHOSPH8Q99549 860 aa16.59■□□□□ 0.25
NCLP1-201ENST00000445357 HPS5Q9UPZ3 1129 aa16.59■□□□□ 0.25
NCLP1-201ENST00000445357 BCL9LQ86UU0 1499 aa16.58■□□□□ 0.25
NCLP1-201ENST00000445357 HELBQ8NG08 1087 aaPredicted RBP16.58■□□□□ 0.25
NCLP1-201ENST00000445357 USP25Q9UHP3 1055 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms