RNA–Protein interactions for RNA: ENST00000444408.1

AP1S3-207, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4

Gene AP1S3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-207ENST00000444408 CNOT7Q9UIV1 285 aaKnown RBP21.18■□□□□ 0.98
AP1S3-207ENST00000444408 FPGT-TNNI3KV9GXZ4 949 aa21.18■□□□□ 0.98
AP1S3-207ENST00000444408 PSME4Q14997 1843 aa21.18■□□□□ 0.98
AP1S3-207ENST00000444408 IQCA1LA6NCM1 817 aa21.17■□□□□ 0.98
AP1S3-207ENST00000444408 EGFRP00533 1210 aa21.17■□□□□ 0.98
AP1S3-207ENST00000444408 LMOD1P29536 600 aaPredicted RBP21.17■□□□□ 0.98
AP1S3-207ENST00000444408 CHAF1AQ13111 956 aaPredicted RBP21.17■□□□□ 0.98
AP1S3-207ENST00000444408 EAPPQ56P03 285 aaPredicted RBP21.17■□□□□ 0.98
AP1S3-207ENST00000444408 DPF2Q92785 391 aa21.17■□□□□ 0.98
AP1S3-207ENST00000444408 BCL11AQ9H165 835 aa21.17■□□□□ 0.98
AP1S3-207ENST00000444408 IL1RAPL2Q9NP60 686 aa21.17■□□□□ 0.98
AP1S3-207ENST00000444408 TLR7Q9NYK1 1049 aaKnown RBP21.17■□□□□ 0.98
AP1S3-207ENST00000444408 AKAP2Q9Y2D5 859 aa21.17■□□□□ 0.98
AP1S3-207ENST00000444408 COL1A1P02452 1464 aaPredicted RBP21.17■□□□□ 0.98
AP1S3-207ENST00000444408 CCDC102BQ68D86 513 aa21.16■□□□□ 0.98
AP1S3-207ENST00000444408 TNS4Q8IZW8 715 aa21.16■□□□□ 0.98
AP1S3-207ENST00000444408 TRPM4Q8TD43 1214 aa21.16■□□□□ 0.98
AP1S3-207ENST00000444408 EAF2Q96CJ1 260 aaPredicted RBP21.16■□□□□ 0.98
AP1S3-207ENST00000444408 DBNDD2Q9BQY9 259 aa21.16■□□□□ 0.98
AP1S3-207ENST00000444408 FAM205AQ6ZU69 1335 aa21.15■□□□□ 0.98
AP1S3-207ENST00000444408 RPS12P25398 132 aaKnown RBP21.15■□□□□ 0.98
AP1S3-207ENST00000444408 GRIK5Q16478 980 aa21.15■□□□□ 0.98
AP1S3-207ENST00000444408 SAMD7Q7Z3H4 446 aa21.15■□□□□ 0.98
AP1S3-207ENST00000444408 RHPN1Q8TCX5 695 aa21.15■□□□□ 0.98
AP1S3-207ENST00000444408 CCDC8Q9H0W5 538 aaPredicted RBP21.15■□□□□ 0.98
AP1S3-207ENST00000444408 GPR108Q9NPR9 543 aa21.15■□□□□ 0.98
AP1S3-207ENST00000444408 SCN4AP35499 1836 aa21.15■□□□□ 0.98
AP1S3-207ENST00000444408 ARAP2Q8WZ64 1704 aa21.15■□□□□ 0.98
AP1S3-207ENST00000444408 FRAT2O75474 233 aaPredicted RBP21.14■□□□□ 0.97
AP1S3-207ENST00000444408 HIRAP54198 1017 aaPredicted RBP21.14■□□□□ 0.97
AP1S3-207ENST00000444408 TBC1D10BQ4KMP7 808 aaPredicted RBP21.14■□□□□ 0.97
AP1S3-207ENST00000444408 RBM26Q5T8P6 1007 aaKnown RBP21.14■□□□□ 0.97
AP1S3-207ENST00000444408 KIAA0825Q8IV33 1275 aa21.14■□□□□ 0.97
AP1S3-207ENST00000444408 AGBL3Q8NEM8 1001 aa21.14■□□□□ 0.97
AP1S3-207ENST00000444408 HSP90AB4PQ58FF6 505 aa21.13■□□□□ 0.97
AP1S3-207ENST00000444408 ADARB2Q9NS39 739 aaKnown RBP21.13■□□□□ 0.97
AP1S3-207ENST00000444408 DBNLQ9UJU6 430 aaKnown RBP21.13■□□□□ 0.97
AP1S3-207ENST00000444408 F8W031 263 aaPredicted RBP21.12■□□□□ 0.97
AP1S3-207ENST00000444408 H7C1D1 291 aa21.12■□□□□ 0.97
AP1S3-207ENST00000444408 SMARCA5O60264 1052 aaPredicted RBP21.12■□□□□ 0.97
AP1S3-207ENST00000444408 USP17L8P0C7I0 530 aa21.12■□□□□ 0.97
AP1S3-207ENST00000444408 RASGRF1Q13972 1273 aa21.12■□□□□ 0.97
AP1S3-207ENST00000444408 ERC1Q8IUD2 1116 aa21.12■□□□□ 0.97
AP1S3-207ENST00000444408 DCTPP1Q9H773 170 aa21.12■□□□□ 0.97
AP1S3-207ENST00000444408 ZNF280AP59817 542 aaPredicted RBP21.11■□□□□ 0.97
AP1S3-207ENST00000444408 SCARF1Q14162 830 aa21.11■□□□□ 0.97
AP1S3-207ENST00000444408 MFSD14BQ5SR56 506 aa21.11■□□□□ 0.97
AP1S3-207ENST00000444408 GORABQ5T7V8 394 aa21.11■□□□□ 0.97
AP1S3-207ENST00000444408 PI16Q6UXB8 463 aa21.11■□□□□ 0.97
AP1S3-207ENST00000444408 AACSQ86V21 672 aa21.11■□□□□ 0.97
AP1S3-207ENST00000444408 KIF1BPQ96EK5 621 aa21.11■□□□□ 0.97
AP1S3-207ENST00000444408 PCDHAC2Q9Y5I4 1007 aa21.11■□□□□ 0.97
AP1S3-207ENST00000444408 ASTN2O75129 1339 aaPredicted RBP21.1■□□□□ 0.97
AP1S3-207ENST00000444408 RAB11FIP3O75154 756 aa21.1■□□□□ 0.97
AP1S3-207ENST00000444408 CLEC11AQ9Y240 323 aa21.1■□□□□ 0.97
AP1S3-207ENST00000444408 MYO3BQ8WXR4 1341 aa21.09■□□□□ 0.97
AP1S3-207ENST00000444408 CAPN15O75808 1086 aa21.09■□□□□ 0.97
AP1S3-207ENST00000444408 HSPA1AP0DMV8 641 aaKnown RBP21.09■□□□□ 0.97
AP1S3-207ENST00000444408 HSPA1BP0DMV9 641 aaKnown RBP21.09■□□□□ 0.97
AP1S3-207ENST00000444408 USP50Q70EL3 339 aaPredicted RBP21.09■□□□□ 0.97
AP1S3-207ENST00000444408 GNL3LQ9NVN8 582 aaKnown RBP21.09■□□□□ 0.97
AP1S3-207ENST00000444408 ADAMTSL1Q8N6G6 1762 aa21.09■□□□□ 0.97
AP1S3-207ENST00000444408 FKBP1AP62942 108 aaKnown RBP21.08■□□□□ 0.97
AP1S3-207ENST00000444408 KIF4BQ2VIQ3 1234 aa21.08■□□□□ 0.97
AP1S3-207ENST00000444408 MAP1SQ66K74 1059 aaPredicted RBP21.08■□□□□ 0.97
AP1S3-207ENST00000444408 PNMA8AQ86V59 439 aaPredicted RBP21.08■□□□□ 0.97
AP1S3-207ENST00000444408 LDHDQ86WU2 507 aa21.08■□□□□ 0.97
AP1S3-207ENST00000444408 MYOZ2Q9NPC6 264 aa21.08■□□□□ 0.97
AP1S3-207ENST00000444408 HMG20BQ9P0W2 317 aa21.08■□□□□ 0.97
AP1S3-207ENST00000444408 IGHDP01880 384 aa21.07■□□□□ 0.96
AP1S3-207ENST00000444408 MCAMP43121 646 aa21.07■□□□□ 0.96
AP1S3-207ENST00000444408 LRRCC1Q9C099 1032 aa21.07■□□□□ 0.96
AP1S3-207ENST00000444408 SNRKQ9NRH2 765 aa21.07■□□□□ 0.96
AP1S3-207ENST00000444408 AOX1Q06278 1338 aa21.06■□□□□ 0.96
AP1S3-207ENST00000444408 ARID4AP29374 1257 aaPredicted RBP21.06■□□□□ 0.96
AP1S3-207ENST00000444408 HDAC1Q13547 482 aaPredicted RBP21.06■□□□□ 0.96
AP1S3-207ENST00000444408 TTC39AQ5SRH9 613 aa21.06■□□□□ 0.96
AP1S3-207ENST00000444408 CHADLQ6NUI6 762 aa21.06■□□□□ 0.96
AP1S3-207ENST00000444408 CLASRPQ8N2M8 674 aaKnown RBP21.06■□□□□ 0.96
AP1S3-207ENST00000444408 DENND2AQ9ULE3 1009 aa21.06■□□□□ 0.96
AP1S3-207ENST00000444408 TTF2Q9UNY4 1162 aaKnown RBP21.06■□□□□ 0.96
AP1S3-207ENST00000444408 SEMA3EO15041 775 aa21.05■□□□□ 0.96
AP1S3-207ENST00000444408 PRDX5P30044 214 aa21.05■□□□□ 0.96
AP1S3-207ENST00000444408 FMR1Q06787 632 aaKnown RBP eCLIP21.05■□□□□ 0.96
AP1S3-207ENST00000444408 AAMPQ13685 434 aa21.05■□□□□ 0.96
AP1S3-207ENST00000444408 NBPF9Q3BBW0 867 aa21.05■□□□□ 0.96
AP1S3-207ENST00000444408 DLK2Q6UY11 383 aa21.05■□□□□ 0.96
AP1S3-207ENST00000444408 OGFOD1Q8N543 542 aa21.05■□□□□ 0.96
AP1S3-207ENST00000444408 CCDC158Q5M9N0 1113 aa21.04■□□□□ 0.96
AP1S3-207ENST00000444408 TBC1D9Q6ZT07 1266 aa21.04■□□□□ 0.96
AP1S3-207ENST00000444408 SPATA5Q8NB90 893 aa21.04■□□□□ 0.96
AP1S3-207ENST00000444408 WDR66Q8TBY9 1149 aa21.04■□□□□ 0.96
AP1S3-207ENST00000444408 TBC1D22AQ8WUA7 517 aa21.04■□□□□ 0.96
AP1S3-207ENST00000444408 SCAF8Q9UPN6 1271 aaKnown RBP21.04■□□□□ 0.96
AP1S3-207ENST00000444408 NDUFB9Q9Y6M9 179 aa21.04■□□□□ 0.96
AP1S3-207ENST00000444408 UQCRFS1P1P0C7P4 283 aa21.03■□□□□ 0.96
AP1S3-207ENST00000444408 CFAP100Q494V2 611 aa21.03■□□□□ 0.96
AP1S3-207ENST00000444408 CREBZFQ9NS37 354 aa21.03■□□□□ 0.96
AP1S3-207ENST00000444408 PGAP2Q9UHJ9 254 aa21.03■□□□□ 0.96
AP1S3-207ENST00000444408 HDAC9Q9UKV0 1011 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms