RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 ZNF804AQ7Z570 1209 aa17.58■□□□□ 0.4
TREX1-202ENST00000444177 CERS5Q8N5B7 392 aa17.58■□□□□ 0.4
TREX1-202ENST00000444177 PUS3Q9BZE2 481 aaKnown RBP17.58■□□□□ 0.4
TREX1-202ENST00000444177 BCAR3O75815 825 aa17.57■□□□□ 0.4
TREX1-202ENST00000444177 SASH1O94885 1247 aa17.57■□□□□ 0.4
TREX1-202ENST00000444177 FRAT1Q92837 279 aaPredicted RBP17.57■□□□□ 0.4
TREX1-202ENST00000444177 ZBED3Q96IU2 234 aaPredicted RBP17.57■□□□□ 0.4
TREX1-202ENST00000444177 USP44Q9H0E7 712 aa17.57■□□□□ 0.4
TREX1-202ENST00000444177 SLC10A3P09131 477 aa17.56■□□□□ 0.4
TREX1-202ENST00000444177 RABL6Q3YEC7 729 aaPredicted RBP17.56■□□□□ 0.4
TREX1-202ENST00000444177 MOB2Q70IA6 237 aa17.56■□□□□ 0.4
TREX1-202ENST00000444177 RIPOR2Q9Y4F9 1068 aa17.56■□□□□ 0.4
TREX1-202ENST00000444177 UBTFL1P0CB47 393 aaPredicted RBP17.55■□□□□ 0.4
TREX1-202ENST00000444177 UBE4AQ14139 1066 aa17.55■□□□□ 0.4
TREX1-202ENST00000444177 ANKRD44Q8N8A2 993 aa17.55■□□□□ 0.4
TREX1-202ENST00000444177 ARHGAP45Q92619 1136 aa17.55■□□□□ 0.4
TREX1-202ENST00000444177 ZNF646O15015 1829 aaPredicted RBP17.55■□□□□ 0.4
TREX1-202ENST00000444177 UBE2Q2LH0YL09 131 aa17.54■□□□□ 0.4
TREX1-202ENST00000444177 IPO8O15397 1037 aaKnown RBP17.54■□□□□ 0.4
TREX1-202ENST00000444177 FKBP1AP62942 108 aaKnown RBP17.54■□□□□ 0.4
TREX1-202ENST00000444177 DLGAP5Q15398 846 aa17.54■□□□□ 0.4
TREX1-202ENST00000444177 CSRNP1Q96S65 589 aa17.54■□□□□ 0.4
TREX1-202ENST00000444177 JAG2Q9Y219 1238 aa17.54■□□□□ 0.4
TREX1-202ENST00000444177 F8W031 263 aaPredicted RBP17.53■□□□□ 0.4
TREX1-202ENST00000444177 TRIM27P14373 513 aa17.53■□□□□ 0.4
TREX1-202ENST00000444177 GYG1P46976 350 aa17.53■□□□□ 0.4
TREX1-202ENST00000444177 ATF7IPQ6VMQ6 1270 aa17.53■□□□□ 0.4
TREX1-202ENST00000444177 APOBEC3FQ8IUX4 373 aaKnown RBP17.53■□□□□ 0.4
TREX1-202ENST00000444177 MTMR14Q8NCE2 650 aa17.53■□□□□ 0.4
TREX1-202ENST00000444177 TDRD7Q8NHU6 1098 aaKnown RBP17.53■□□□□ 0.4
TREX1-202ENST00000444177 ABHD8Q96I13 439 aa17.53■□□□□ 0.4
TREX1-202ENST00000444177 FAM84BQ96KN1 310 aaPredicted RBP17.53■□□□□ 0.4
TREX1-202ENST00000444177 TNNQ9UQP3 1299 aa17.53■□□□□ 0.4
TREX1-202ENST00000444177 FAM205AQ6ZU69 1335 aa17.52■□□□□ 0.4
TREX1-202ENST00000444177 MROH5Q6ZUA9 1318 aa17.52■□□□□ 0.4
TREX1-202ENST00000444177 HIBADHP31937 336 aaKnown RBP17.52■□□□□ 0.4
TREX1-202ENST00000444177 NF2P35240 595 aa17.52■□□□□ 0.4
TREX1-202ENST00000444177 TTLL12Q14166 644 aaPredicted RBP17.52■□□□□ 0.4
TREX1-202ENST00000444177 RASAL3Q86YV0 1011 aa17.52■□□□□ 0.4
TREX1-202ENST00000444177 RNF186Q9NXI6 227 aa17.52■□□□□ 0.4
TREX1-202ENST00000444177 PCDHAC2Q9Y5I4 1007 aa17.52■□□□□ 0.4
TREX1-202ENST00000444177 CASP8AP2Q9UKL3 1982 aa17.51■□□□□ 0.39
TREX1-202ENST00000444177 TRPA1O75762 1119 aa17.51■□□□□ 0.39
TREX1-202ENST00000444177 CFAP100Q494V2 611 aa17.51■□□□□ 0.39
TREX1-202ENST00000444177 LRRC24Q50LG9 513 aa17.51■□□□□ 0.39
TREX1-202ENST00000444177 INTS3Q68E01 1043 aaKnown RBP17.51■□□□□ 0.39
TREX1-202ENST00000444177 REM2Q8IYK8 340 aaPredicted RBP17.51■□□□□ 0.39
TREX1-202ENST00000444177 CLUAP1Q96AJ1 413 aa17.51■□□□□ 0.39
TREX1-202ENST00000444177 MEIS3Q99687 375 aa17.51■□□□□ 0.39
TREX1-202ENST00000444177 DEFB129Q9H1M3 183 aa17.51■□□□□ 0.39
TREX1-202ENST00000444177 SAGE1Q9NXZ1 904 aa17.51■□□□□ 0.39
TREX1-202ENST00000444177 LRRFIP2Q9Y608 721 aaKnown RBP17.51■□□□□ 0.39
TREX1-202ENST00000444177 ZKSCAN2Q63HK3 967 aa17.5■□□□□ 0.39
TREX1-202ENST00000444177 KLHDC4Q8TBB5 520 aa17.5■□□□□ 0.39
TREX1-202ENST00000444177 PRMT6Q96LA8 375 aaPredicted RBP17.5■□□□□ 0.39
TREX1-202ENST00000444177 PAPPA2Q9BXP8 1791 aa17.5■□□□□ 0.39
TREX1-202ENST00000444177 SPDYE2BA6NHP3 402 aa17.49■□□□□ 0.39
TREX1-202ENST00000444177 SPDYE6P0CI01 402 aa17.49■□□□□ 0.39
TREX1-202ENST00000444177 PRKG1Q13976 671 aa17.49■□□□□ 0.39
TREX1-202ENST00000444177 METTL24Q5JXM2 366 aa17.49■□□□□ 0.39
TREX1-202ENST00000444177 MFSD14BQ5SR56 506 aa17.49■□□□□ 0.39
TREX1-202ENST00000444177 FBXO33Q7Z6M2 555 aa17.49■□□□□ 0.39
TREX1-202ENST00000444177 HDAC5Q9UQL6 1122 aa17.49■□□□□ 0.39
TREX1-202ENST00000444177 MYO1BO43795 1136 aa17.48■□□□□ 0.39
TREX1-202ENST00000444177 PDE8BO95263 885 aa17.48■□□□□ 0.39
TREX1-202ENST00000444177 RBM5P52756 815 aaKnown RBP eCLIP17.48■□□□□ 0.39
TREX1-202ENST00000444177 PTPN12Q05209 780 aaKnown RBP17.48■□□□□ 0.39
TREX1-202ENST00000444177 ARMC9Q7Z3E5 817 aa17.48■□□□□ 0.39
TREX1-202ENST00000444177 CLRN2A0PK11 232 aa17.47■□□□□ 0.39
TREX1-202ENST00000444177 GNAI3P08754 354 aa17.47■□□□□ 0.39
TREX1-202ENST00000444177 LDLRAD1Q5T700 205 aa17.47■□□□□ 0.39
TREX1-202ENST00000444177 VPS37DQ86XT2 251 aa17.47■□□□□ 0.39
TREX1-202ENST00000444177 FTSJ3Q8IY81 847 aaKnown RBP17.47■□□□□ 0.39
TREX1-202ENST00000444177 VGLL2Q8N8G2 317 aa17.47■□□□□ 0.39
TREX1-202ENST00000444177 MCOLN1Q9GZU1 580 aa17.47■□□□□ 0.39
TREX1-202ENST00000444177 TTF2Q9UNY4 1162 aaKnown RBP17.47■□□□□ 0.39
TREX1-202ENST00000444177 AOX1Q06278 1338 aa17.47■□□□□ 0.39
TREX1-202ENST00000444177 RFX5P48382 616 aaPredicted RBP17.46■□□□□ 0.39
TREX1-202ENST00000444177 CAVIN4Q5BKX8 364 aa17.46■□□□□ 0.39
TREX1-202ENST00000444177 TMEM57Q8N5G2 664 aa17.46■□□□□ 0.39
TREX1-202ENST00000444177 SERPINA10Q9UK55 444 aa17.46■□□□□ 0.39
TREX1-202ENST00000444177 ANGEL1Q9UNK9 670 aaKnown RBP17.46■□□□□ 0.39
TREX1-202ENST00000444177 IQSEC3Q9UPP2 1182 aaPredicted RBP17.46■□□□□ 0.39
TREX1-202ENST00000444177 PPP2R3BQ9Y5P8 575 aa17.46■□□□□ 0.39
TREX1-202ENST00000444177 BCAMP50895 628 aa17.45■□□□□ 0.38
TREX1-202ENST00000444177 DGKZQ13574 1117 aa17.45■□□□□ 0.38
TREX1-202ENST00000444177 SIL1Q9H173 461 aa17.45■□□□□ 0.38
TREX1-202ENST00000444177 VEZTQ9HBM0 779 aa17.45■□□□□ 0.38
TREX1-202ENST00000444177 FZD1Q9UP38 647 aa17.45■□□□□ 0.38
TREX1-202ENST00000444177 CCDC85CA6NKD9 419 aa17.44■□□□□ 0.38
TREX1-202ENST00000444177 EYA2O00167 538 aa17.44■□□□□ 0.38
TREX1-202ENST00000444177 FRAT2O75474 233 aaPredicted RBP17.44■□□□□ 0.38
TREX1-202ENST00000444177 TM4SF4P48230 202 aa17.44■□□□□ 0.38
TREX1-202ENST00000444177 MKRN3Q13064 507 aaKnown RBP17.44■□□□□ 0.38
TREX1-202ENST00000444177 CHAF1AQ13111 956 aaPredicted RBP17.44■□□□□ 0.38
TREX1-202ENST00000444177 SUPT20HL1Q3ZLR7 823 aa17.44■□□□□ 0.38
TREX1-202ENST00000444177 AKAP11Q9UKA4 1901 aa17.44■□□□□ 0.38
TREX1-202ENST00000444177 COL1A1P02452 1464 aaPredicted RBP17.44■□□□□ 0.38
TREX1-202ENST00000444177 PPP1R12BO60237 982 aaPredicted RBP17.43■□□□□ 0.38
TREX1-202ENST00000444177 FGFR2P21802 821 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms