RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 VPS37DQ86XT2 251 aa19.49■□□□□ 0.71
ACTB-206ENST00000443528 ZC3H15Q8WU90 426 aaKnown RBP19.49■□□□□ 0.71
ACTB-206ENST00000443528 IQSEC3Q9UPP2 1182 aaPredicted RBP19.49■□□□□ 0.71
ACTB-206ENST00000443528 APLP1P51693 650 aa19.48■□□□□ 0.71
ACTB-206ENST00000443528 RRP1P56182 461 aaKnown RBP19.48■□□□□ 0.71
ACTB-206ENST00000443528 TIMM10P62072 90 aa19.48■□□□□ 0.71
ACTB-206ENST00000443528 G3BP1Q13283 466 aaKnown RBP eCLIP19.48■□□□□ 0.711e-28■■□□□ 12.1
ACTB-206ENST00000443528 KIAA0825Q8IV33 1275 aa19.48■□□□□ 0.71
ACTB-206ENST00000443528 MYOZ2Q9NPC6 264 aa19.48■□□□□ 0.71
ACTB-206ENST00000443528 ADORA1P30542 326 aa19.47■□□□□ 0.71
ACTB-206ENST00000443528 HTRA3P83110 453 aa19.47■□□□□ 0.71
ACTB-206ENST00000443528 NOP58Q9Y2X3 529 aaKnown RBP19.47■□□□□ 0.71
ACTB-206ENST00000443528 A0A1B0GUL7 405 aa19.46■□□□□ 0.71
ACTB-206ENST00000443528 SURF6O75683 361 aaKnown RBP19.46■□□□□ 0.71
ACTB-206ENST00000443528 FMR1Q06787 632 aaKnown RBP eCLIP19.46■□□□□ 0.711e-75■□□□□ 8.1
ACTB-206ENST00000443528 SIRT2Q8IXJ6 389 aa19.46■□□□□ 0.71
ACTB-206ENST00000443528 OGFOD1Q8N543 542 aa19.46■□□□□ 0.71
ACTB-206ENST00000443528 CHMP4BQ9H444 224 aaKnown RBP19.46■□□□□ 0.71
ACTB-206ENST00000443528 ASTN2O75129 1339 aaPredicted RBP19.46■□□□□ 0.71
ACTB-206ENST00000443528 CEP350Q5VT06 3117 aa19.45■□□□□ 0.7
ACTB-206ENST00000443528 MMP14P50281 582 aa19.45■□□□□ 0.7
ACTB-206ENST00000443528 SCARF1Q14162 830 aa19.45■□□□□ 0.7
ACTB-206ENST00000443528 MFSD14BQ5SR56 506 aa19.45■□□□□ 0.7
ACTB-206ENST00000443528 RPAP2Q8IXW5 612 aaPredicted RBP19.45■□□□□ 0.7
ACTB-206ENST00000443528 AKAP2Q9Y2D5 859 aa19.45■□□□□ 0.7
ACTB-206ENST00000443528 TRAF5O00463 557 aa19.44■□□□□ 0.7
ACTB-206ENST00000443528 FRAT2O75474 233 aaPredicted RBP19.44■□□□□ 0.7
ACTB-206ENST00000443528 PHKA1P46020 1223 aa19.44■□□□□ 0.7
ACTB-206ENST00000443528 CHAF1AQ13111 956 aaPredicted RBP19.44■□□□□ 0.7
ACTB-206ENST00000443528 GLIS2Q9BZE0 524 aaPredicted RBP19.44■□□□□ 0.7
ACTB-206ENST00000443528 HDAC9Q9UKV0 1011 aa19.44■□□□□ 0.7
ACTB-206ENST00000443528 F8W031 263 aaPredicted RBP19.43■□□□□ 0.7
ACTB-206ENST00000443528 GRIK5Q16478 980 aa19.43■□□□□ 0.7
ACTB-206ENST00000443528 NBPF9Q3BBW0 867 aa19.43■□□□□ 0.7
ACTB-206ENST00000443528 CCDC102BQ68D86 513 aa19.43■□□□□ 0.7
ACTB-206ENST00000443528 XAGE2Q96GT9 111 aa19.43■□□□□ 0.7
ACTB-206ENST00000443528 ZBED3Q96IU2 234 aaPredicted RBP19.43■□□□□ 0.7
ACTB-206ENST00000443528 GGA3Q9NZ52 723 aa19.43■□□□□ 0.7
ACTB-206ENST00000443528 ARAP2Q8WZ64 1704 aa19.42■□□□□ 0.7
ACTB-206ENST00000443528 COL1A1P02452 1464 aaPredicted RBP19.42■□□□□ 0.7
ACTB-206ENST00000443528 WNT10BO00744 389 aa19.42■□□□□ 0.7
ACTB-206ENST00000443528 OS9Q13438 667 aaPredicted RBP19.42■□□□□ 0.7
ACTB-206ENST00000443528 DLK2Q6UY11 383 aa19.42■□□□□ 0.7
ACTB-206ENST00000443528 CDC37L1Q7L3B6 337 aa19.42■□□□□ 0.7
ACTB-206ENST00000443528 NEUROD6Q96NK8 337 aa19.42■□□□□ 0.7
ACTB-206ENST00000443528 ZBTB22O15209 634 aa19.41■□□□□ 0.7
ACTB-206ENST00000443528 ANGEL2Q5VTE6 544 aaKnown RBP19.41■□□□□ 0.7
ACTB-206ENST00000443528 USP48Q86UV5 1035 aa19.41■□□□□ 0.7
ACTB-206ENST00000443528 TBC1D22AQ8WUA7 517 aa19.41■□□□□ 0.7
ACTB-206ENST00000443528 DCPSQ96C86 337 aaKnown RBP19.41■□□□□ 0.7
ACTB-206ENST00000443528 GPR108Q9NPR9 543 aa19.41■□□□□ 0.7
ACTB-206ENST00000443528 EXOC6BQ9Y2D4 811 aa19.41■□□□□ 0.7
ACTB-206ENST00000443528 PCDHAC2Q9Y5I4 1007 aa19.41■□□□□ 0.7
ACTB-206ENST00000443528 TNNI3KQ59H18 835 aa19.4■□□□□ 0.7
ACTB-206ENST00000443528 KRT26Q7Z3Y9 468 aa19.4■□□□□ 0.7
ACTB-206ENST00000443528 DNAJC5GQ8N7S2 189 aa19.4■□□□□ 0.7
ACTB-206ENST00000443528 MTMR14Q8NCE2 650 aa19.4■□□□□ 0.7
ACTB-206ENST00000443528 CREBZFQ9NS37 354 aa19.4■□□□□ 0.7
ACTB-206ENST00000443528 GNL3LQ9NVN8 582 aaKnown RBP19.4■□□□□ 0.7
ACTB-206ENST00000443528 FPGT-TNNI3KV9GXZ4 949 aa19.4■□□□□ 0.7
ACTB-206ENST00000443528 TMEM88BA6NKF7 163 aa19.39■□□□□ 0.69
ACTB-206ENST00000443528 ADM5C9JUS6 153 aa19.39■□□□□ 0.69
ACTB-206ENST00000443528 SEMA3EO15041 775 aa19.39■□□□□ 0.69
ACTB-206ENST00000443528 CST9Q5W186 159 aa19.39■□□□□ 0.69
ACTB-206ENST00000443528 TTF2Q9UNY4 1162 aaKnown RBP19.39■□□□□ 0.69
ACTB-206ENST00000443528 HMMRO75330 724 aa19.38■□□□□ 0.69
ACTB-206ENST00000443528 RASGRF1Q13972 1273 aa19.38■□□□□ 0.69
ACTB-206ENST00000443528 DLGAP5Q15398 846 aa19.38■□□□□ 0.69
ACTB-206ENST00000443528 CFAP100Q494V2 611 aa19.38■□□□□ 0.69
ACTB-206ENST00000443528 WDR66Q8TBY9 1149 aa19.38■□□□□ 0.69
ACTB-206ENST00000443528 PITPNM2Q9BZ72 1349 aa19.38■□□□□ 0.69
ACTB-206ENST00000443528 DENND2AQ9ULE3 1009 aa19.38■□□□□ 0.69
ACTB-206ENST00000443528 SCAF8Q9UPN6 1271 aaKnown RBP19.38■□□□□ 0.69
ACTB-206ENST00000443528 AOX1Q06278 1338 aa19.37■□□□□ 0.69
ACTB-206ENST00000443528 SPDYE2BA6NHP3 402 aa19.37■□□□□ 0.69
ACTB-206ENST00000443528 SPDYE6P0CI01 402 aa19.37■□□□□ 0.69
ACTB-206ENST00000443528 PRMT6Q96LA8 375 aaPredicted RBP19.37■□□□□ 0.69
ACTB-206ENST00000443528 CRBNQ96SW2 442 aa19.37■□□□□ 0.69
ACTB-206ENST00000443528 SERPINA10Q9UK55 444 aa19.37■□□□□ 0.69
ACTB-206ENST00000443528 HSP90AB4PQ58FF6 505 aa19.36■□□□□ 0.69
ACTB-206ENST00000443528 ERC1Q8IUD2 1116 aa19.36■□□□□ 0.69
ACTB-206ENST00000443528 SULF1Q8IWU6 871 aa19.36■□□□□ 0.69
ACTB-206ENST00000443528 EAF2Q96CJ1 260 aaPredicted RBP19.36■□□□□ 0.69
ACTB-206ENST00000443528 DBNDD2Q9BQY9 259 aa19.36■□□□□ 0.69
ACTB-206ENST00000443528 SUGT1Q9Y2Z0 365 aa19.36■□□□□ 0.69
ACTB-206ENST00000443528 PDS5AQ29RF7 1337 aaKnown RBP19.35■□□□□ 0.69
ACTB-206ENST00000443528 SALL1Q9NSC2 1324 aa19.35■□□□□ 0.69
ACTB-206ENST00000443528 CELF2O95319 508 aaKnown RBP19.35■□□□□ 0.69
ACTB-206ENST00000443528 ARID4AP29374 1257 aaPredicted RBP19.35■□□□□ 0.69
ACTB-206ENST00000443528 CRKP46108 304 aa19.35■□□□□ 0.69
ACTB-206ENST00000443528 RBM5P52756 815 aaKnown RBP eCLIP19.35■□□□□ 0.691e-6■■■□□ 18.7
ACTB-206ENST00000443528 GORABQ5T7V8 394 aa19.35■□□□□ 0.69
ACTB-206ENST00000443528 RHPN1Q8TCX5 695 aa19.35■□□□□ 0.69
ACTB-206ENST00000443528 TLR7Q9NYK1 1049 aaKnown RBP19.35■□□□□ 0.69
ACTB-206ENST00000443528 POLR2AP24928 1970 aaKnown RBP19.34■□□□□ 0.69
ACTB-206ENST00000443528 PRDX5P30044 214 aa19.34■□□□□ 0.69
ACTB-206ENST00000443528 HDLBPQ00341 1268 aaKnown RBP19.34■□□□□ 0.69
ACTB-206ENST00000443528 PI16Q6UXB8 463 aa19.34■□□□□ 0.69
ACTB-206ENST00000443528 MRIQ9BWK5 157 aa19.34■□□□□ 0.69
ACTB-206ENST00000443528 CCDC8Q9H0W5 538 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms