RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 SSRP1Q08945 709 aaKnown RBP12.35□□□□□ -0.43
CALD1-210ENST00000443197 ZNF444Q8N0Y2 327 aaPredicted RBP12.35□□□□□ -0.43
CALD1-210ENST00000443197 FSIP1Q8NA03 581 aa12.35□□□□□ -0.43
CALD1-210ENST00000443197 KAZALD1Q96I82 304 aa12.35□□□□□ -0.43
CALD1-210ENST00000443197 ESPNB1AK53 854 aa12.35□□□□□ -0.43
CALD1-210ENST00000443197 LARGE1O95461 756 aa12.35□□□□□ -0.43
CALD1-210ENST00000443197 CTCFLQ8NI51 663 aaPredicted RBP12.35□□□□□ -0.43
CALD1-210ENST00000443197 ALG1Q9BT22 464 aa12.35□□□□□ -0.43
CALD1-210ENST00000443197 DACT1Q9NYF0 836 aa12.35□□□□□ -0.43
CALD1-210ENST00000443197 MPHOSPH10O00566 681 aaKnown RBP12.34□□□□□ -0.43
CALD1-210ENST00000443197 FGAP02671 866 aa12.34□□□□□ -0.43
CALD1-210ENST00000443197 CDC37L1Q7L3B6 337 aa12.34□□□□□ -0.43
CALD1-210ENST00000443197 ZSWIM6Q9HCJ5 1215 aa12.34□□□□□ -0.43
CALD1-210ENST00000443197 SMC2O95347 1197 aa12.34□□□□□ -0.43
CALD1-210ENST00000443197 RPS8P62241 208 aaKnown RBP12.34□□□□□ -0.43
CALD1-210ENST00000443197 HOOK1Q9UJC3 728 aaKnown RBP12.34□□□□□ -0.43
CALD1-210ENST00000443197 CHRNDQ07001 517 aa12.34□□□□□ -0.43
CALD1-210ENST00000443197 VSIG10Q8N0Z9 540 aa12.34□□□□□ -0.43
CALD1-210ENST00000443197 VAT1LQ9HCJ6 419 aa12.34□□□□□ -0.43
CALD1-210ENST00000443197 LMBRD1Q9NUN5 540 aa12.34□□□□□ -0.43
CALD1-210ENST00000443197 PDIA4P13667 645 aaKnown RBP12.33□□□□□ -0.43
CALD1-210ENST00000443197 MARCKSP29966 332 aaPredicted RBP12.33□□□□□ -0.43
CALD1-210ENST00000443197 FOXO4P98177 505 aa12.33□□□□□ -0.43
CALD1-210ENST00000443197 CATIPQ7Z7H3 387 aa12.33□□□□□ -0.43
CALD1-210ENST00000443197 OSBP2Q969R2 916 aa12.33□□□□□ -0.43
CALD1-210ENST00000443197 MCM9Q9NXL9 1143 aa12.33□□□□□ -0.43
CALD1-210ENST00000443197 CCDC196A0A1B0GTZ2 297 aa12.33□□□□□ -0.44
CALD1-210ENST00000443197 BRD1O95696 1058 aa12.33□□□□□ -0.44
CALD1-210ENST00000443197 ERFEQ4G0M1 354 aa12.33□□□□□ -0.44
CALD1-210ENST00000443197 PDILTQ8N807 584 aa12.33□□□□□ -0.44
CALD1-210ENST00000443197 NAT10Q9H0A0 1025 aaKnown RBP12.33□□□□□ -0.44
CALD1-210ENST00000443197 CCDC39Q9UFE4 941 aa12.33□□□□□ -0.44
CALD1-210ENST00000443197 NRXN3Q9Y4C0 1643 aa12.33□□□□□ -0.44
CALD1-210ENST00000443197 PALLDQ8WX93 1383 aa12.33□□□□□ -0.44
CALD1-210ENST00000443197 HIBADHP31937 336 aaKnown RBP12.33□□□□□ -0.44
CALD1-210ENST00000443197 CCAR1Q8IX12 1150 aaKnown RBP12.33□□□□□ -0.44
CALD1-210ENST00000443197 CRNKL1Q9BZJ0 848 aaKnown RBP12.33□□□□□ -0.44
CALD1-210ENST00000443197 MROH5Q6ZUA9 1318 aa12.33□□□□□ -0.44
CALD1-210ENST00000443197 PDE6AP16499 860 aa12.33□□□□□ -0.44
CALD1-210ENST00000443197 OLFM4Q6UX06 510 aa12.33□□□□□ -0.44
CALD1-210ENST00000443197 FAM196AQ6ZSG2 479 aa12.33□□□□□ -0.44
CALD1-210ENST00000443197 FILIP1Q7Z7B0 1213 aa12.33□□□□□ -0.44
CALD1-210ENST00000443197 ESR2Q92731 530 aa12.33□□□□□ -0.44
CALD1-210ENST00000443197 TM6SF1Q9BZW5 370 aa12.33□□□□□ -0.44
CALD1-210ENST00000443197 PUS7LQ9H0K6 701 aaKnown RBP12.32□□□□□ -0.44
CALD1-210ENST00000443197 AATFQ9NY61 560 aaKnown RBP eCLIP12.32□□□□□ -0.44
CALD1-210ENST00000443197 R3HCC1Q9Y3T6 440 aaKnown RBP12.32□□□□□ -0.44
CALD1-210ENST00000443197 PICALMQ13492 652 aa12.32□□□□□ -0.44
CALD1-210ENST00000443197 LRSAM1Q6UWE0 723 aa12.32□□□□□ -0.44
CALD1-210ENST00000443197 SDR42E1Q8WUS8 393 aa12.32□□□□□ -0.44
CALD1-210ENST00000443197 WASF1Q92558 559 aa12.32□□□□□ -0.44
CALD1-210ENST00000443197 QTRT2Q9H974 415 aaKnown RBP12.32□□□□□ -0.44
CALD1-210ENST00000443197 MAST3O60307 1309 aa12.32□□□□□ -0.44
CALD1-210ENST00000443197 RGS12O14924 1447 aa12.32□□□□□ -0.44
CALD1-210ENST00000443197 TRIM37O94972 964 aa12.32□□□□□ -0.44
CALD1-210ENST00000443197 CLSTN1O94985 981 aa12.32□□□□□ -0.44
CALD1-210ENST00000443197 KRT23Q9C075 422 aa12.32□□□□□ -0.44
CALD1-210ENST00000443197 M0R2C6 588 aa12.31□□□□□ -0.44
CALD1-210ENST00000443197 BAG3O95817 575 aa12.31□□□□□ -0.44
CALD1-210ENST00000443197 NECTIN1Q15223 517 aa12.31□□□□□ -0.44
CALD1-210ENST00000443197 MARCH10Q8NA82 808 aaPredicted RBP12.31□□□□□ -0.44
CALD1-210ENST00000443197 PHKBQ93100 1093 aa12.31□□□□□ -0.44
CALD1-210ENST00000443197 CIAO1O76071 339 aa12.31□□□□□ -0.44
CALD1-210ENST00000443197 RTN1Q16799 776 aa12.31□□□□□ -0.44
CALD1-210ENST00000443197 IFIT1BQ5T764 474 aaKnown RBP12.31□□□□□ -0.44
CALD1-210ENST00000443197 ISCA1Q9BUE6 129 aa12.31□□□□□ -0.44
CALD1-210ENST00000443197 ZSCAN16Q9H4T2 348 aaPredicted RBP12.31□□□□□ -0.44
CALD1-210ENST00000443197 KDM6AO15550 1401 aaPredicted RBP12.31□□□□□ -0.44
CALD1-210ENST00000443197 PDE4BQ07343 736 aa12.31□□□□□ -0.44
CALD1-210ENST00000443197 DSCC1Q9BVC3 393 aa12.31□□□□□ -0.44
CALD1-210ENST00000443197 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.31□□□□□ -0.44
CALD1-210ENST00000443197 UFL1O94874 794 aa12.3□□□□□ -0.44
CALD1-210ENST00000443197 HOMER1Q86YM7 354 aa12.3□□□□□ -0.44
CALD1-210ENST00000443197 TMEM63CQ9P1W3 806 aa12.3□□□□□ -0.44
CALD1-210ENST00000443197 hCG_1642624A0A1W2PR95 340 aa12.3□□□□□ -0.44
CALD1-210ENST00000443197 SCARF1Q14162 830 aa12.3□□□□□ -0.44
CALD1-210ENST00000443197 ZMYM1Q5SVZ6 1142 aa12.3□□□□□ -0.44
CALD1-210ENST00000443197 CMTR1Q8N1G2 835 aaKnown RBP12.3□□□□□ -0.44
CALD1-210ENST00000443197 GPHNQ9NQX3 736 aaPredicted RBP12.3□□□□□ -0.44
CALD1-210ENST00000443197 LDHBP07195 334 aaKnown RBP12.3□□□□□ -0.44
CALD1-210ENST00000443197 SPTY2D1Q68D10 685 aaPredicted RBP12.3□□□□□ -0.44
CALD1-210ENST00000443197 CRACR2BQ8N4Y2 399 aaPredicted RBP12.3□□□□□ -0.44
CALD1-210ENST00000443197 ZC3H12CQ9C0D7 883 aaKnown RBP12.3□□□□□ -0.44
CALD1-210ENST00000443197 CNNM2Q9H8M5 875 aa12.3□□□□□ -0.44
CALD1-210ENST00000443197 LDHCP07864 332 aa12.3□□□□□ -0.44
CALD1-210ENST00000443197 NLRP5P59047 1200 aa12.3□□□□□ -0.44
CALD1-210ENST00000443197 ATG9AQ7Z3C6 839 aa12.3□□□□□ -0.44
CALD1-210ENST00000443197 FAM13BQ9NYF5 915 aa12.3□□□□□ -0.44
CALD1-210ENST00000443197 MCAMP43121 646 aa12.29□□□□□ -0.44
CALD1-210ENST00000443197 SOGA3Q5TF21 947 aa12.29□□□□□ -0.44
CALD1-210ENST00000443197 MSL1Q68DK7 614 aa12.29□□□□□ -0.44
CALD1-210ENST00000443197 SAP30BPQ9UHR5 308 aaKnown RBP12.29□□□□□ -0.44
CALD1-210ENST00000443197 DENND2AQ9ULE3 1009 aa12.29□□□□□ -0.44
CALD1-210ENST00000443197 ERVV-1B6SEH8 477 aa12.29□□□□□ -0.44
CALD1-210ENST00000443197 ANKRD2Q9GZV1 360 aa12.29□□□□□ -0.44
CALD1-210ENST00000443197 RBSNQ9H1K0 784 aa12.29□□□□□ -0.44
CALD1-210ENST00000443197 GPR108Q9NPR9 543 aa12.29□□□□□ -0.44
CALD1-210ENST00000443197 NOL7Q9UMY1 257 aaKnown RBP12.29□□□□□ -0.44
CALD1-210ENST00000443197 ANGEL1Q9UNK9 670 aaKnown RBP12.29□□□□□ -0.44
CALD1-210ENST00000443197 ADD1P35611 737 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms