RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 SPATA5Q8NB90 893 aa16.56■□□□□ 0.24
TM9SF4-204ENST00000442842 BOLA2Q9H3K6 86 aa16.56■□□□□ 0.24
TM9SF4-204ENST00000442842 DENND2AQ9ULE3 1009 aa16.56■□□□□ 0.24
TM9SF4-204ENST00000442842 GJA3Q9Y6H8 435 aa16.56■□□□□ 0.24
TM9SF4-204ENST00000442842 TTC41PQ6P2S7 1318 aa16.55■□□□□ 0.24
TM9SF4-204ENST00000442842 FZD9O00144 591 aa16.55■□□□□ 0.24
TM9SF4-204ENST00000442842 SEMA3EO15041 775 aa16.55■□□□□ 0.24
TM9SF4-204ENST00000442842 RGS3P49796 1198 aa16.55■□□□□ 0.24
TM9SF4-204ENST00000442842 CIAPIN1Q6FI81 312 aa16.55■□□□□ 0.24
TM9SF4-204ENST00000442842 MXD3Q9BW11 206 aa16.55■□□□□ 0.24
TM9SF4-204ENST00000442842 HMG20BQ9P0W2 317 aa16.55■□□□□ 0.24
TM9SF4-204ENST00000442842 USP17L3A6NCW0 530 aa16.54■□□□□ 0.24
TM9SF4-204ENST00000442842 USP17L4A6NCW7 530 aa16.54■□□□□ 0.24
TM9SF4-204ENST00000442842 PSMD14O00487 310 aa16.54■□□□□ 0.24
TM9SF4-204ENST00000442842 ERC2O15083 957 aa16.54■□□□□ 0.24
TM9SF4-204ENST00000442842 MAP4K4O95819 1239 aaPredicted RBP16.54■□□□□ 0.24
TM9SF4-204ENST00000442842 ATP5JP18859 108 aa16.54■□□□□ 0.24
TM9SF4-204ENST00000442842 ZAP70P43403 619 aa16.54■□□□□ 0.24
TM9SF4-204ENST00000442842 PDE1AP54750 535 aa16.54■□□□□ 0.24
TM9SF4-204ENST00000442842 TTLL5Q6EMB2 1281 aa16.54■□□□□ 0.24
TM9SF4-204ENST00000442842 USP17L1Q7RTZ2 530 aa16.54■□□□□ 0.24
TM9SF4-204ENST00000442842 PLEKHM2Q8IWE5 1019 aa16.54■□□□□ 0.24
TM9SF4-204ENST00000442842 CXCL9Q07325 125 aa16.53■□□□□ 0.24
TM9SF4-204ENST00000442842 PI4K2BQ8TCG2 481 aa16.53■□□□□ 0.24
TM9SF4-204ENST00000442842 ZNF512BQ96KM6 892 aaPredicted RBP16.53■□□□□ 0.24
TM9SF4-204ENST00000442842 F8W031 263 aaPredicted RBP16.52■□□□□ 0.24
TM9SF4-204ENST00000442842 GOLIM4O00461 696 aa16.52■□□□□ 0.24
TM9SF4-204ENST00000442842 GLRX3O76003 335 aaKnown RBP16.52■□□□□ 0.24
TM9SF4-204ENST00000442842 TNIP1Q15025 636 aa16.52■□□□□ 0.24
TM9SF4-204ENST00000442842 MFSD14BQ5SR56 506 aa16.52■□□□□ 0.24
TM9SF4-204ENST00000442842 DACT2Q5SW24 774 aa16.52■□□□□ 0.24
TM9SF4-204ENST00000442842 STRIP1Q5VSL9 837 aa16.52■□□□□ 0.24
TM9SF4-204ENST00000442842 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.52■□□□□ 0.24
TM9SF4-204ENST00000442842 EDC3Q96F86 508 aaKnown RBP16.52■□□□□ 0.24
TM9SF4-204ENST00000442842 ABCF2Q9UG63 623 aa16.52■□□□□ 0.24
TM9SF4-204ENST00000442842 STAP2Q9UGK3 403 aa16.52■□□□□ 0.24
TM9SF4-204ENST00000442842 ZBTB12Q9Y330 459 aaPredicted RBP16.52■□□□□ 0.24
TM9SF4-204ENST00000442842 SBF1O95248 1867 aa16.52■□□□□ 0.23
TM9SF4-204ENST00000442842 AOX1Q06278 1338 aa16.51■□□□□ 0.23
TM9SF4-204ENST00000442842 PDS5AQ29RF7 1337 aaKnown RBP16.51■□□□□ 0.23
TM9SF4-204ENST00000442842 FAM205AQ6ZU69 1335 aa16.51■□□□□ 0.23
TM9SF4-204ENST00000442842 ZC3H4Q9UPT8 1303 aaKnown RBP16.51■□□□□ 0.23
TM9SF4-204ENST00000442842 CCDC88AQ3V6T2 1871 aa16.51■□□□□ 0.23
TM9SF4-204ENST00000442842 RSBN1LQ6PCB5 846 aaPredicted RBP16.51■□□□□ 0.23
TM9SF4-204ENST00000442842 TBC1D9Q6ZT07 1266 aa16.51■□□□□ 0.23
TM9SF4-204ENST00000442842 WDR66Q8TBY9 1149 aa16.51■□□□□ 0.23
TM9SF4-204ENST00000442842 HAUS7Q99871 368 aa16.51■□□□□ 0.23
TM9SF4-204ENST00000442842 SCN9AQ15858 1988 aa16.5■□□□□ 0.23
TM9SF4-204ENST00000442842 DDNO94850 711 aaPredicted RBP16.5■□□□□ 0.23
TM9SF4-204ENST00000442842 CYP2E1P05181 493 aaPredicted RBP16.5■□□□□ 0.23
TM9SF4-204ENST00000442842 GMPSP49915 693 aaPredicted RBP16.5■□□□□ 0.23
TM9SF4-204ENST00000442842 CERS5Q8N5B7 392 aa16.5■□□□□ 0.23
TM9SF4-204ENST00000442842 TBC1D22AQ8WUA7 517 aa16.5■□□□□ 0.23
TM9SF4-204ENST00000442842 ANTXR1Q9H6X2 564 aa16.5■□□□□ 0.23
TM9SF4-204ENST00000442842 PAG1Q9NWQ8 432 aa16.5■□□□□ 0.23
TM9SF4-204ENST00000442842 MYH13Q9UKX3 1938 aa16.5■□□□□ 0.23
TM9SF4-204ENST00000442842 DICER1Q9UPY3 1922 aaKnown RBP16.5■□□□□ 0.23
TM9SF4-204ENST00000442842 TRIM6-TRIM34B2RNG4 842 aa16.49■□□□□ 0.23
TM9SF4-204ENST00000442842 VIL1P09327 827 aaKnown RBP16.49■□□□□ 0.23
TM9SF4-204ENST00000442842 KIAA0825Q8IV33 1275 aa16.49■□□□□ 0.23
TM9SF4-204ENST00000442842 GPC2Q8N158 579 aa16.49■□□□□ 0.23
TM9SF4-204ENST00000442842 ZGPATQ8N5A5 531 aaKnown RBP16.49■□□□□ 0.23
TM9SF4-204ENST00000442842 OSBPL3Q9H4L5 887 aa16.49■□□□□ 0.23
TM9SF4-204ENST00000442842 PIH1D3Q9NQM4 214 aaKnown RBP16.49■□□□□ 0.23
TM9SF4-204ENST00000442842 ZNF646O15015 1829 aaPredicted RBP16.49■□□□□ 0.23
TM9SF4-204ENST00000442842 MYO3BQ8WXR4 1341 aa16.48■□□□□ 0.23
TM9SF4-204ENST00000442842 IDH1O75874 414 aaKnown RBP16.48■□□□□ 0.23
TM9SF4-204ENST00000442842 PRDX5P30044 214 aa16.48■□□□□ 0.23
TM9SF4-204ENST00000442842 GRIK5Q16478 980 aa16.48■□□□□ 0.23
TM9SF4-204ENST00000442842 TTC22Q5TAA0 569 aa16.48■□□□□ 0.23
TM9SF4-204ENST00000442842 DPY19L2Q6NUT2 758 aa16.48■□□□□ 0.23
TM9SF4-204ENST00000442842 DZIP1Q86YF9 867 aaKnown RBP16.48■□□□□ 0.23
TM9SF4-204ENST00000442842 RAI14Q9P0K7 980 aa16.48■□□□□ 0.23
TM9SF4-204ENST00000442842 LRP2BPQ9P2M1 347 aa16.48■□□□□ 0.23
TM9SF4-204ENST00000442842 SALL1Q9NSC2 1324 aa16.47■□□□□ 0.23
TM9SF4-204ENST00000442842 LDHBP07195 334 aaKnown RBP16.47■□□□□ 0.23
TM9SF4-204ENST00000442842 GSPT1P15170 499 aaKnown RBP16.47■□□□□ 0.23
TM9SF4-204ENST00000442842 TTF1Q15361 905 aaPredicted RBP16.47■□□□□ 0.23
TM9SF4-204ENST00000442842 ERICH6Q7L0X2 663 aa16.47■□□□□ 0.23
TM9SF4-204ENST00000442842 ZNF526Q8TF50 670 aaPredicted RBP16.47■□□□□ 0.23
TM9SF4-204ENST00000442842 RILPL2Q969X0 211 aa16.47■□□□□ 0.23
TM9SF4-204ENST00000442842 FSD1Q9BTV5 496 aa16.47■□□□□ 0.23
TM9SF4-204ENST00000442842 ZBTB22O15209 634 aa16.46■□□□□ 0.23
TM9SF4-204ENST00000442842 RPS12P25398 132 aaKnown RBP16.46■□□□□ 0.23
TM9SF4-204ENST00000442842 SCNN1DP51172 638 aa16.46■□□□□ 0.23
TM9SF4-204ENST00000442842 FKBP1AP62942 108 aaKnown RBP16.46■□□□□ 0.23
TM9SF4-204ENST00000442842 SPTY2D1Q68D10 685 aaPredicted RBP16.46■□□□□ 0.23
TM9SF4-204ENST00000442842 CNTROBQ8N137 903 aa16.46■□□□□ 0.23
TM9SF4-204ENST00000442842 AGBL3Q8NEM8 1001 aa16.46■□□□□ 0.23
TM9SF4-204ENST00000442842 TTF2Q9UNY4 1162 aaKnown RBP16.46■□□□□ 0.23
TM9SF4-204ENST00000442842 PSME4Q14997 1843 aa16.46■□□□□ 0.23
TM9SF4-204ENST00000442842 MAST2Q6P0Q8 1798 aa16.46■□□□□ 0.22
TM9SF4-204ENST00000442842 CHD4Q14839 1912 aa16.45■□□□□ 0.22
TM9SF4-204ENST00000442842 SHTN1A0MZ66 631 aa16.45■□□□□ 0.22
TM9SF4-204ENST00000442842 GLTPD2A6NH11 291 aa16.45■□□□□ 0.22
TM9SF4-204ENST00000442842 LMOD1P29536 600 aaPredicted RBP16.45■□□□□ 0.22
TM9SF4-204ENST00000442842 MICALL2Q8IY33 904 aa16.45■□□□□ 0.22
TM9SF4-204ENST00000442842 MAST3O60307 1309 aa16.45■□□□□ 0.22
TM9SF4-204ENST00000442842 USP17L8P0C7I0 530 aa16.44■□□□□ 0.22
TM9SF4-204ENST00000442842 MECOMQ03112 1051 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms