RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 LRP10Q7Z4F1 713 aa16.44■□□□□ 0.22
MCF2L-218ENST00000442625 SMARCC2Q8TAQ2 1214 aa16.44■□□□□ 0.22
MCF2L-218ENST00000442625 ZBTB9Q96C00 473 aa16.44■□□□□ 0.22
MCF2L-218ENST00000442625 TRERF1Q96PN7 1200 aa16.44■□□□□ 0.22
MCF2L-218ENST00000442625 ANO10Q9NW15 660 aa16.44■□□□□ 0.22
MCF2L-218ENST00000442625 OVOS2A0A0G2JMS6 1433 aa16.44■□□□□ 0.22
MCF2L-218ENST00000442625 PFKFB2O60825 505 aa16.44■□□□□ 0.22
MCF2L-218ENST00000442625 CEP57L1Q8IYX8 460 aa16.44■□□□□ 0.22
MCF2L-218ENST00000442625 MRC1P22897 1456 aa16.43■□□□□ 0.22
MCF2L-218ENST00000442625 PHKG2P15735 406 aa16.43■□□□□ 0.22
MCF2L-218ENST00000442625 AXDND1Q5T1B0 1012 aaPredicted RBP16.43■□□□□ 0.22
MCF2L-218ENST00000442625 TTLL5Q6EMB2 1281 aa16.43■□□□□ 0.22
MCF2L-218ENST00000442625 DHX32Q7L7V1 743 aaKnown RBP16.43■□□□□ 0.22
MCF2L-218ENST00000442625 TTC5Q8N0Z6 440 aa16.43■□□□□ 0.22
MCF2L-218ENST00000442625 KBTBD3Q8NAB2 608 aa16.43■□□□□ 0.22
MCF2L-218ENST00000442625 ERO1AQ96HE7 468 aa16.43■□□□□ 0.22
MCF2L-218ENST00000442625 PSMD1Q99460 953 aa16.43■□□□□ 0.22
MCF2L-218ENST00000442625 CLIC4Q9Y696 253 aa16.43■□□□□ 0.22
MCF2L-218ENST00000442625 PPP1R13BQ96KQ4 1090 aa16.43■□□□□ 0.22
MCF2L-218ENST00000442625 KRT28Q7Z3Y7 464 aa16.42■□□□□ 0.22
MCF2L-218ENST00000442625 EPC1Q9H2F5 836 aa16.42■□□□□ 0.22
MCF2L-218ENST00000442625 C5P01031 1676 aa16.42■□□□□ 0.22
MCF2L-218ENST00000442625 FER1L4A9Z1Z3 1794 aa16.42■□□□□ 0.22
MCF2L-218ENST00000442625 RABL6Q3YEC7 729 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-218ENST00000442625 DDX17Q92841 729 aaKnown RBP16.42■□□□□ 0.22
MCF2L-218ENST00000442625 TMX1Q9H3N1 280 aa16.42■□□□□ 0.22
MCF2L-218ENST00000442625 SNRPA1P09661 255 aaKnown RBP16.41■□□□□ 0.22
MCF2L-218ENST00000442625 LMOD1P29536 600 aaPredicted RBP16.41■□□□□ 0.22
MCF2L-218ENST00000442625 FMR1NBQ8N0W7 255 aaPredicted RBP16.41■□□□□ 0.22
MCF2L-218ENST00000442625 PAG1Q9NWQ8 432 aa16.41■□□□□ 0.22
MCF2L-218ENST00000442625 NEMFO60524 1076 aa16.41■□□□□ 0.22
MCF2L-218ENST00000442625 ATP1A3P13637 1013 aa16.41■□□□□ 0.22
MCF2L-218ENST00000442625 ZNF594Q96JF6 807 aaPredicted RBP16.41■□□□□ 0.22
MCF2L-218ENST00000442625 E7EWF7 191 aa16.4■□□□□ 0.22
MCF2L-218ENST00000442625 CTAGE5O15320 804 aa16.4■□□□□ 0.22
MCF2L-218ENST00000442625 CAVIN2O95810 425 aa16.4■□□□□ 0.22
MCF2L-218ENST00000442625 FAM177A1Q8N128 213 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-218ENST00000442625 CSB-PGBD3P0DP91 1061 aa16.4■□□□□ 0.22
MCF2L-218ENST00000442625 FDPSP14324 419 aaKnown RBP16.4■□□□□ 0.22
MCF2L-218ENST00000442625 TATP17735 454 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-218ENST00000442625 ADRA2BP18089 450 aa16.4■□□□□ 0.22
MCF2L-218ENST00000442625 HAND2P61296 217 aa16.4■□□□□ 0.22
MCF2L-218ENST00000442625 HSP90AA4PQ58FG1 418 aa16.4■□□□□ 0.22
MCF2L-218ENST00000442625 NAA16Q6N069 864 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-218ENST00000442625 HSPD1P10809 573 aaKnown RBP16.39■□□□□ 0.22
MCF2L-218ENST00000442625 PSEN1P49768 467 aa16.39■□□□□ 0.22
MCF2L-218ENST00000442625 CLCN6P51797 869 aa16.39■□□□□ 0.22
MCF2L-218ENST00000442625 HOMER1Q86YM7 354 aa16.39■□□□□ 0.22
MCF2L-218ENST00000442625 MRPS27Q92552 414 aaKnown RBP16.39■□□□□ 0.22
MCF2L-218ENST00000442625 LLPHQ9BRT6 129 aaKnown RBP16.39■□□□□ 0.22
MCF2L-218ENST00000442625 PDIA3P30101 505 aaKnown RBP16.39■□□□□ 0.21
MCF2L-218ENST00000442625 CASP7P55210 303 aa16.39■□□□□ 0.21
MCF2L-218ENST00000442625 EXOSC10Q01780 885 aaKnown RBP16.39■□□□□ 0.21
MCF2L-218ENST00000442625 SF3A1Q15459 793 aaKnown RBP16.39■□□□□ 0.21
MCF2L-218ENST00000442625 LRRC24Q50LG9 513 aa16.39■□□□□ 0.21
MCF2L-218ENST00000442625 ARHGAP29Q52LW3 1261 aa16.39■□□□□ 0.21
MCF2L-218ENST00000442625 HSP90AB3PQ58FF7 597 aa16.39■□□□□ 0.21
MCF2L-218ENST00000442625 ATG9AQ7Z3C6 839 aa16.39■□□□□ 0.21
MCF2L-218ENST00000442625 SH3TC1Q8TE82 1336 aa16.39■□□□□ 0.21
MCF2L-218ENST00000442625 SIPA1L3O60292 1781 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-218ENST00000442625 FANCGO15287 622 aa16.39■□□□□ 0.21
MCF2L-218ENST00000442625 CABLES1Q8TDN4 633 aa16.39■□□□□ 0.21
MCF2L-218ENST00000442625 DNAI1Q9UI46 699 aa16.39■□□□□ 0.21
MCF2L-218ENST00000442625 CYP27B1O15528 508 aa16.38■□□□□ 0.21
MCF2L-218ENST00000442625 CHRNA2Q15822 529 aa16.38■□□□□ 0.21
MCF2L-218ENST00000442625 DPF2Q92785 391 aa16.38■□□□□ 0.21
MCF2L-218ENST00000442625 ZNF396Q96N95 335 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-218ENST00000442625 FAM53CQ9NYF3 392 aa16.38■□□□□ 0.21
MCF2L-218ENST00000442625 KIAA1468Q9P260 1216 aa16.38■□□□□ 0.21
MCF2L-218ENST00000442625 MAST3O60307 1309 aa16.38■□□□□ 0.21
MCF2L-218ENST00000442625 PHRF1Q9P1Y6 1649 aaKnown RBP16.38■□□□□ 0.21
MCF2L-218ENST00000442625 M0R2C6 588 aa16.38■□□□□ 0.21
MCF2L-218ENST00000442625 SEC31AO94979 1220 aaKnown RBP16.38■□□□□ 0.21
MCF2L-218ENST00000442625 SFPQP23246 707 aaKnown RBP eCLIP16.38■□□□□ 0.21
MCF2L-218ENST00000442625 FOXO4P98177 505 aa16.38■□□□□ 0.21
MCF2L-218ENST00000442625 STK38Q15208 465 aa16.38■□□□□ 0.21
MCF2L-218ENST00000442625 FHOD1Q9Y613 1164 aa16.38■□□□□ 0.21
MCF2L-218ENST00000442625 MEGF6O75095 1541 aa16.38■□□□□ 0.21
MCF2L-218ENST00000442625 POLR3GO15318 223 aaPredicted RBP16.37■□□□□ 0.21
MCF2L-218ENST00000442625 MARCKSP29966 332 aaPredicted RBP16.37■□□□□ 0.21
MCF2L-218ENST00000442625 ZRSR1Q15695 479 aaKnown RBP16.37■□□□□ 0.21
MCF2L-218ENST00000442625 IFNL2Q8IZJ0 200 aa16.37■□□□□ 0.21
MCF2L-218ENST00000442625 SLIT3O75094 1523 aa16.37■□□□□ 0.21
MCF2L-218ENST00000442625 NEDD4P46934 1319 aa16.37■□□□□ 0.21
MCF2L-218ENST00000442625 CARMIL3Q8ND23 1372 aa16.37■□□□□ 0.21
MCF2L-218ENST00000442625 FKBP4Q02790 459 aaKnown RBP eCLIP16.37■□□□□ 0.21
MCF2L-218ENST00000442625 ZMYM1Q5SVZ6 1142 aa16.37■□□□□ 0.21
MCF2L-218ENST00000442625 TTLL7Q6ZT98 887 aa16.37■□□□□ 0.21
MCF2L-218ENST00000442625 NAT10Q9H0A0 1025 aaKnown RBP16.37■□□□□ 0.21
MCF2L-218ENST00000442625 OSBPL5Q9H0X9 879 aaPredicted RBP16.37■□□□□ 0.21
MCF2L-218ENST00000442625 RGPD5Q99666 1765 aa16.36■□□□□ 0.21
MCF2L-218ENST00000442625 DSCC1Q9BVC3 393 aa16.36■□□□□ 0.21
MCF2L-218ENST00000442625 PUS3Q9BZE2 481 aaKnown RBP16.36■□□□□ 0.21
MCF2L-218ENST00000442625 HELLSQ9NRZ9 838 aa16.36■□□□□ 0.21
MCF2L-218ENST00000442625 SALL1Q9NSC2 1324 aa16.36■□□□□ 0.21
MCF2L-218ENST00000442625 IFIT1P09914 478 aaKnown RBP16.36■□□□□ 0.21
MCF2L-218ENST00000442625 H2AFXP16104 143 aaPredicted RBP16.36■□□□□ 0.21
MCF2L-218ENST00000442625 GSDMDP57764 484 aa16.36■□□□□ 0.21
MCF2L-218ENST00000442625 LINC00301Q8NCQ3 95 aa16.36■□□□□ 0.21
MCF2L-218ENST00000442625 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms