RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 RXRBP28702 533 aa8.75□□□□□ -1.01
CHD6-204ENST00000440647 SNRPNP63162 240 aaKnown RBP8.75□□□□□ -1.01
CHD6-204ENST00000440647 RTN1Q16799 776 aa8.75□□□□□ -1.01
CHD6-204ENST00000440647 SLCO4C1Q6ZQN7 724 aa8.75□□□□□ -1.01
CHD6-204ENST00000440647 C1orf229Q6ZS94 237 aaPredicted RBP8.75□□□□□ -1.01
CHD6-204ENST00000440647 CEP63Q96MT8 703 aa8.75□□□□□ -1.01
CHD6-204ENST00000440647 C1orf115Q9H7X2 142 aa8.75□□□□□ -1.01
CHD6-204ENST00000440647 AVENQ9NQS1 362 aaPredicted RBP8.75□□□□□ -1.01
CHD6-204ENST00000440647 GGA1Q9UJY5 639 aa8.75□□□□□ -1.01
CHD6-204ENST00000440647 RPGRIP1LQ68CZ1 1315 aa8.75□□□□□ -1.01
CHD6-204ENST00000440647 SHISA8B8ZZ34 492 aa8.74□□□□□ -1.01
CHD6-204ENST00000440647 SFSWAPQ12872 951 aaKnown RBP8.74□□□□□ -1.01
CHD6-204ENST00000440647 VTI1AQ96AJ9 217 aa8.74□□□□□ -1.01
CHD6-204ENST00000440647 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.74□□□□□ -1.012e-6■■■■■ 89.2
CHD6-204ENST00000440647 C1orf167Q5SNV9 1468 aa8.74□□□□□ -1.01
CHD6-204ENST00000440647 AFF2P51816 1311 aa8.74□□□□□ -1.01
CHD6-204ENST00000440647 CCDC144AA2RUR9 1427 aa8.73□□□□□ -1.01
CHD6-204ENST00000440647 TMEM164Q5U3C3 297 aa8.73□□□□□ -1.01
CHD6-204ENST00000440647 PRIMPOLQ96LW4 560 aa8.73□□□□□ -1.01
CHD6-204ENST00000440647 C8orf37Q96NL8 207 aa8.73□□□□□ -1.01
CHD6-204ENST00000440647 PRR12Q9ULL5 1215 aa8.73□□□□□ -1.01
CHD6-204ENST00000440647 PNPLA6Q8IY17 1366 aa8.73□□□□□ -1.01
CHD6-204ENST00000440647 ROBO2Q9HCK4 1378 aa8.73□□□□□ -1.01
CHD6-204ENST00000440647 LAMC1P11047 1609 aa8.72□□□□□ -1.01
CHD6-204ENST00000440647 CDK12Q9NYV4 1490 aaPredicted RBP8.72□□□□□ -1.01
CHD6-204ENST00000440647 IFT172Q9UG01 1749 aa8.72□□□□□ -1.01
CHD6-204ENST00000440647 PRMT3O60678 531 aa8.72□□□□□ -1.01
CHD6-204ENST00000440647 KCNQ4P56696 695 aa8.72□□□□□ -1.01
CHD6-204ENST00000440647 BTLAQ7Z6A9 289 aa8.72□□□□□ -1.01
CHD6-204ENST00000440647 DDX17Q92841 729 aaKnown RBP8.72□□□□□ -1.01
CHD6-204ENST00000440647 BTBD6Q96KE9 485 aa8.72□□□□□ -1.01
CHD6-204ENST00000440647 BRD7Q9NPI1 651 aa8.72□□□□□ -1.01
CHD6-204ENST00000440647 KLF15Q9UIH9 416 aa8.72□□□□□ -1.01
CHD6-204ENST00000440647 CDC42BPGQ6DT37 1551 aa8.72□□□□□ -1.01
CHD6-204ENST00000440647 PRAG1Q86YV5 1406 aa8.71□□□□□ -1.01
CHD6-204ENST00000440647 NEURL1BA8MQ27 555 aa8.71□□□□□ -1.02
CHD6-204ENST00000440647 GNB5O14775 395 aa8.71□□□□□ -1.02
CHD6-204ENST00000440647 EPXP11678 715 aa8.71□□□□□ -1.02
CHD6-204ENST00000440647 ADH6P28332 368 aa8.71□□□□□ -1.02
CHD6-204ENST00000440647 TYRO3Q06418 890 aa8.71□□□□□ -1.02
CHD6-204ENST00000440647 FKBP5Q13451 457 aaPredicted RBP8.71□□□□□ -1.02
CHD6-204ENST00000440647 OCLNQ16625 522 aa8.71□□□□□ -1.02
CHD6-204ENST00000440647 ZNF468Q5VIY5 522 aaPredicted RBP8.71□□□□□ -1.02
CHD6-204ENST00000440647 IER5Q5VY09 327 aa8.71□□□□□ -1.02
CHD6-204ENST00000440647 MYO19Q96H55 970 aa8.71□□□□□ -1.02
CHD6-204ENST00000440647 QTRT2Q9H974 415 aaKnown RBP8.71□□□□□ -1.02
CHD6-204ENST00000440647 NOP53Q9NZM5 478 aaKnown RBP8.71□□□□□ -1.02
CHD6-204ENST00000440647 KCNH4Q9UQ05 1017 aa8.71□□□□□ -1.02
CHD6-204ENST00000440647 TGFBR3LH3BV60 316 aa8.7□□□□□ -1.02
CHD6-204ENST00000440647 KNDC1Q76NI1 1749 aa8.7□□□□□ -1.02
CHD6-204ENST00000440647 COL22A1Q8NFW1 1626 aaPredicted RBP8.69□□□□□ -1.02
CHD6-204ENST00000440647 ADAM23O75077 832 aa8.69□□□□□ -1.02
CHD6-204ENST00000440647 PCBP4P57723 403 aaKnown RBP8.69□□□□□ -1.02
CHD6-204ENST00000440647 GRIN2CQ14957 1233 aa8.69□□□□□ -1.02
CHD6-204ENST00000440647 C11orf91Q3C1V1 193 aa8.69□□□□□ -1.02
CHD6-204ENST00000440647 RGL3Q3MIN7 710 aa8.69□□□□□ -1.02
CHD6-204ENST00000440647 LINC00114Q6XXX2 140 aa8.69□□□□□ -1.02
CHD6-204ENST00000440647 CLP1Q92989 425 aaKnown RBP8.69□□□□□ -1.02
CHD6-204ENST00000440647 ORAI2Q96SN7 254 aa8.69□□□□□ -1.02
CHD6-204ENST00000440647 KLK14Q9P0G3 267 aa8.69□□□□□ -1.02
CHD6-204ENST00000440647 DMGDHQ9UI17 866 aaKnown RBP8.69□□□□□ -1.02
CHD6-204ENST00000440647 BCS1LQ9Y276 419 aa8.69□□□□□ -1.02
CHD6-204ENST00000440647 RGS12O14924 1447 aa8.69□□□□□ -1.02
CHD6-204ENST00000440647 MARF1Q9Y4F3 1742 aaKnown RBP8.68□□□□□ -1.02
CHD6-204ENST00000440647 RBM6P78332 1123 aaKnown RBP8.68□□□□□ -1.02
CHD6-204ENST00000440647 DGKZQ13574 1117 aa8.68□□□□□ -1.02
CHD6-204ENST00000440647 SYT9Q86SS6 491 aa8.68□□□□□ -1.02
CHD6-204ENST00000440647 FCHSD1Q86WN1 690 aa8.68□□□□□ -1.02
CHD6-204ENST00000440647 SLC30A3Q99726 388 aa8.68□□□□□ -1.02
CHD6-204ENST00000440647 CXXC1Q9P0U4 656 aaPredicted RBP8.68□□□□□ -1.02
CHD6-204ENST00000440647 STK26Q9P289 416 aa8.68□□□□□ -1.02
CHD6-204ENST00000440647 NPHP3Q7Z494 1330 aa8.68□□□□□ -1.02
CHD6-204ENST00000440647 ANKRD30BQ9BXX2 1392 aa8.68□□□□□ -1.02
CHD6-204ENST00000440647 KIF1AQ12756 1690 aa8.68□□□□□ -1.02
CHD6-204ENST00000440647 KRBA1A5PL33 1030 aa8.67□□□□□ -1.02
CHD6-204ENST00000440647 SIN3BO75182 1162 aa8.67□□□□□ -1.02
CHD6-204ENST00000440647 PROCP04070 461 aa8.67□□□□□ -1.02
CHD6-204ENST00000440647 LRPPRCP42704 1394 aaKnown RBP8.67□□□□□ -1.02
CHD6-204ENST00000440647 SPEM2Q0P670 501 aa8.67□□□□□ -1.02
CHD6-204ENST00000440647 ADGRF5Q8IZF2 1346 aa8.67□□□□□ -1.02
CHD6-204ENST00000440647 COL26A1Q96A83 441 aa8.67□□□□□ -1.02
CHD6-204ENST00000440647 MPHOSPH9Q99550 1183 aa8.67□□□□□ -1.02
CHD6-204ENST00000440647 FMN2Q9NZ56 1722 aa8.67□□□□□ -1.02
CHD6-204ENST00000440647 LRFN2Q9ULH4 789 aa8.67□□□□□ -1.02
CHD6-204ENST00000440647 SPATA31E1Q6ZUB1 1445 aa8.66□□□□□ -1.02
CHD6-204ENST00000440647 ITGB2P05107 769 aa8.66□□□□□ -1.02
CHD6-204ENST00000440647 TRIM26Q12899 539 aaPredicted RBP8.66□□□□□ -1.02
CHD6-204ENST00000440647 NEUROD1Q13562 356 aa8.66□□□□□ -1.02
CHD6-204ENST00000440647 USP21Q9UK80 565 aa8.66□□□□□ -1.02
CHD6-204ENST00000440647 PXDNQ92626 1479 aa8.65□□□□□ -1.02
CHD6-204ENST00000440647 TECPR2O15040 1411 aa8.65□□□□□ -1.02
CHD6-204ENST00000440647 PIK3C2GO75747 1445 aa8.65□□□□□ -1.02
CHD6-204ENST00000440647 ALAS2P22557 587 aa8.65□□□□□ -1.02
CHD6-204ENST00000440647 COX20Q5RI15 118 aa8.65□□□□□ -1.02
CHD6-204ENST00000440647 TRPC5Q9UL62 973 aaPredicted RBP8.65□□□□□ -1.02
CHD6-204ENST00000440647 MYOM2P54296 1465 aa8.64□□□□□ -1.03
CHD6-204ENST00000440647 YTHDC2Q9H6S0 1430 aaKnown RBP8.64□□□□□ -1.03
CHD6-204ENST00000440647 K7ELQ4 463 aaPredicted RBP8.64□□□□□ -1.03
CHD6-204ENST00000440647 PTCD1O75127 700 aaKnown RBP8.64□□□□□ -1.03
CHD6-204ENST00000440647 MICAL2O94851 1124 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms