RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 HMGB1P09429 215 aaKnown RBP15.68■□□□□ 0.1
ACTN4-204ENST00000440400 HMGB2P26583 209 aaKnown RBP15.68■□□□□ 0.1
ACTN4-204ENST00000440400 PHKA1P46020 1223 aa15.68■□□□□ 0.1
ACTN4-204ENST00000440400 PKP1Q13835 747 aa15.68■□□□□ 0.1
ACTN4-204ENST00000440400 TM4SF1P30408 202 aa15.68■□□□□ 0.1
ACTN4-204ENST00000440400 EXOSC10Q01780 885 aaKnown RBP15.68■□□□□ 0.1
ACTN4-204ENST00000440400 COL9A3Q14050 684 aaPredicted RBP15.68■□□□□ 0.1
ACTN4-204ENST00000440400 GAS2L3Q86XJ1 694 aa15.68■□□□□ 0.1
ACTN4-204ENST00000440400 PIH1D3Q9NQM4 214 aaKnown RBP15.68■□□□□ 0.1
ACTN4-204ENST00000440400 WDR19Q8NEZ3 1342 aa15.68■□□□□ 0.1
ACTN4-204ENST00000440400 MYH15Q9Y2K3 1946 aa15.68■□□□□ 0.1
ACTN4-204ENST00000440400 LARGE1O95461 756 aa15.67■□□□□ 0.1
ACTN4-204ENST00000440400 CHRNDQ07001 517 aa15.67■□□□□ 0.1
ACTN4-204ENST00000440400 STOX1Q6ZVD7 989 aa15.67■□□□□ 0.1
ACTN4-204ENST00000440400 BLOC1S2Q6QNY1 142 aa15.67■□□□□ 0.1
ACTN4-204ENST00000440400 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.67■□□□□ 0.13e-7■■□□□ 13.7
ACTN4-204ENST00000440400 ANKRD31Q8N7Z5 1873 aa15.67■□□□□ 0.1
ACTN4-204ENST00000440400 KCNQ4P56696 695 aa15.67■□□□□ 0.1
ACTN4-204ENST00000440400 EVCP57679 992 aa15.67■□□□□ 0.1
ACTN4-204ENST00000440400 UBE4AQ14139 1066 aa15.67■□□□□ 0.1
ACTN4-204ENST00000440400 SKOR2Q2VWA4 1001 aaPredicted RBP15.67■□□□□ 0.1
ACTN4-204ENST00000440400 GORABQ5T7V8 394 aa15.67■□□□□ 0.1
ACTN4-204ENST00000440400 MPHOSPH8Q99549 860 aa15.67■□□□□ 0.1
ACTN4-204ENST00000440400 SRP68Q9UHB9 627 aaKnown RBP15.67■□□□□ 0.1
ACTN4-204ENST00000440400 TPCN1Q9ULQ1 816 aa15.67■□□□□ 0.1
ACTN4-204ENST00000440400 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.67■□□□□ 0.1
ACTN4-204ENST00000440400 LAMB1P07942 1786 aa15.66■□□□□ 0.1
ACTN4-204ENST00000440400 CPA1P15085 419 aa15.66■□□□□ 0.1
ACTN4-204ENST00000440400 ALX1Q15699 326 aa15.66■□□□□ 0.1
ACTN4-204ENST00000440400 ME3Q16798 604 aa15.66■□□□□ 0.1
ACTN4-204ENST00000440400 SPATA5Q8NB90 893 aa15.66■□□□□ 0.1
ACTN4-204ENST00000440400 NEK1Q96PY6 1258 aa15.66■□□□□ 0.1
ACTN4-204ENST00000440400 DLEC1Q9Y238 1755 aa15.65■□□□□ 0.1
ACTN4-204ENST00000440400 IGSF3O75054 1194 aa15.65■□□□□ 0.1
ACTN4-204ENST00000440400 FKBP4Q02790 459 aaKnown RBP eCLIP15.65■□□□□ 0.1
ACTN4-204ENST00000440400 SLFNL1Q499Z3 407 aa15.65■□□□□ 0.1
ACTN4-204ENST00000440400 SETDB2Q96T68 719 aa15.65■□□□□ 0.1
ACTN4-204ENST00000440400 A0A0G2JS52 829 aa15.65■□□□□ 0.1
ACTN4-204ENST00000440400 ZPR1O75312 459 aa15.65■□□□□ 0.1
ACTN4-204ENST00000440400 PI16Q6UXB8 463 aa15.65■□□□□ 0.1
ACTN4-204ENST00000440400 ANKRD18AQ8IVF6 992 aa15.65■□□□□ 0.1
ACTN4-204ENST00000440400 HOMEZQ8IX15 550 aa15.65■□□□□ 0.1
ACTN4-204ENST00000440400 RASGRF1Q13972 1273 aa15.65■□□□□ 0.1
ACTN4-204ENST00000440400 PUS7LQ9H0K6 701 aaKnown RBP15.65■□□□□ 0.1
ACTN4-204ENST00000440400 FAM182BQ5T319 152 aa15.64■□□□□ 0.09
ACTN4-204ENST00000440400 TMED8Q6PL24 325 aaPredicted RBP15.64■□□□□ 0.09
ACTN4-204ENST00000440400 KRT27Q7Z3Y8 459 aa15.64■□□□□ 0.09
ACTN4-204ENST00000440400 MINPP1Q9UNW1 487 aa15.64■□□□□ 0.09
ACTN4-204ENST00000440400 KCNJ4P48050 445 aa15.64■□□□□ 0.09
ACTN4-204ENST00000440400 TMEM87AQ8NBN3 555 aa15.64■□□□□ 0.09
ACTN4-204ENST00000440400 CTNNA3Q9UI47 895 aa15.64■□□□□ 0.09
ACTN4-204ENST00000440400 TRAPPC3LQ5T215 181 aa15.63■□□□□ 0.09
ACTN4-204ENST00000440400 PNPLA7Q6ZV29 1317 aa15.63■□□□□ 0.09
ACTN4-204ENST00000440400 WDR33Q9C0J8 1336 aaKnown RBP15.63■□□□□ 0.09
ACTN4-204ENST00000440400 SEMA3EO15041 775 aa15.63■□□□□ 0.09
ACTN4-204ENST00000440400 PDE6AP16499 860 aa15.63■□□□□ 0.09
ACTN4-204ENST00000440400 TPTE2Q6XPS3 522 aa15.63■□□□□ 0.09
ACTN4-204ENST00000440400 LMBRD1Q9NUN5 540 aa15.63■□□□□ 0.09
ACTN4-204ENST00000440400 CCDC88AQ3V6T2 1871 aa15.63■□□□□ 0.09
ACTN4-204ENST00000440400 E7EWF7 191 aa15.63■□□□□ 0.09
ACTN4-204ENST00000440400 DHX32Q7L7V1 743 aaKnown RBP15.62■□□□□ 0.09
ACTN4-204ENST00000440400 FBXO33Q7Z6M2 555 aa15.62■□□□□ 0.09
ACTN4-204ENST00000440400 GTF2E1P29083 439 aaPredicted RBP15.62■□□□□ 0.09
ACTN4-204ENST00000440400 CRY2Q49AN0 593 aa15.62■□□□□ 0.09
ACTN4-204ENST00000440400 C15orf52Q6ZUT6 534 aaKnown RBP15.62■□□□□ 0.09
ACTN4-204ENST00000440400 KLRG2A4D1S0 409 aaPredicted RBP15.61■□□□□ 0.09
ACTN4-204ENST00000440400 GPAA1O43292 621 aa15.61■□□□□ 0.09
ACTN4-204ENST00000440400 DHX37Q8IY37 1157 aaKnown RBP15.61■□□□□ 0.09
ACTN4-204ENST00000440400 NBPF3Q9H094 633 aa15.61■□□□□ 0.09
ACTN4-204ENST00000440400 ECM29Q5VYK3 1845 aa15.61■□□□□ 0.09
ACTN4-204ENST00000440400 KLHL40Q2TBA0 621 aa15.61■□□□□ 0.09
ACTN4-204ENST00000440400 NBPF5PQ86XG9 351 aaPredicted RBP15.61■□□□□ 0.09
ACTN4-204ENST00000440400 RGS22Q8NE09 1264 aa15.61■□□□□ 0.09
ACTN4-204ENST00000440400 HELBQ8NG08 1087 aaPredicted RBP15.61■□□□□ 0.09
ACTN4-204ENST00000440400 CELF1Q92879 486 aaKnown RBP15.61■□□□□ 0.09
ACTN4-204ENST00000440400 GTF3C6Q969F1 213 aa15.61■□□□□ 0.09
ACTN4-204ENST00000440400 OFD1O75665 1012 aa15.61■□□□□ 0.09
ACTN4-204ENST00000440400 NFIXQ14938 502 aa15.61■□□□□ 0.09
ACTN4-204ENST00000440400 ZNF772Q68DY9 489 aaPredicted RBP15.61■□□□□ 0.09
ACTN4-204ENST00000440400 SMIM5Q71RC9 77 aa15.61■□□□□ 0.09
ACTN4-204ENST00000440400 NLRP3Q96P20 1036 aa15.61■□□□□ 0.09
ACTN4-204ENST00000440400 ANKRD2Q9GZV1 360 aa15.61■□□□□ 0.09
ACTN4-204ENST00000440400 WWC3Q9ULE0 1092 aa15.61■□□□□ 0.09
ACTN4-204ENST00000440400 FAM177BA6PVY3 158 aa15.6■□□□□ 0.09
ACTN4-204ENST00000440400 PLSCR1O15162 318 aa15.6■□□□□ 0.09
ACTN4-204ENST00000440400 GYS1P13807 737 aa15.6■□□□□ 0.09
ACTN4-204ENST00000440400 RBM6P78332 1123 aaKnown RBP15.6■□□□□ 0.09
ACTN4-204ENST00000440400 STRBPQ96SI9 672 aaKnown RBP15.6■□□□□ 0.09
ACTN4-204ENST00000440400 DDX60LQ5H9U9 1706 aaKnown RBP15.6■□□□□ 0.09
ACTN4-204ENST00000440400 ZNF532Q9HCE3 1301 aa15.6■□□□□ 0.09
ACTN4-204ENST00000440400 COL11A2P13942 1736 aaPredicted RBP15.6■□□□□ 0.09
ACTN4-204ENST00000440400 PFKFB2O60825 505 aa15.6■□□□□ 0.09
ACTN4-204ENST00000440400 FGAP02671 866 aa15.6■□□□□ 0.09
ACTN4-204ENST00000440400 MSNP26038 577 aaKnown RBP15.6■□□□□ 0.09
ACTN4-204ENST00000440400 MB21D2Q8IYB1 491 aaPredicted RBP15.6■□□□□ 0.09
ACTN4-204ENST00000440400 SMAP1Q8IYB5 467 aaPredicted RBP15.6■□□□□ 0.09
ACTN4-204ENST00000440400 SMARCC2Q8TAQ2 1214 aa15.6■□□□□ 0.09
ACTN4-204ENST00000440400 LLPHQ9BRT6 129 aaKnown RBP15.6■□□□□ 0.09
ACTN4-204ENST00000440400 ISY1Q9ULR0 285 aaKnown RBP15.6■□□□□ 0.09
ACTN4-204ENST00000440400 NID2Q14112 1375 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms