RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 GDPD2Q9HCC8 539 aa16.72■□□□□ 0.27
LIMD1-202ENST00000440097 ZPR1O75312 459 aa16.71■□□□□ 0.27
LIMD1-202ENST00000440097 Q6ZUG5 572 aa16.71■□□□□ 0.27
LIMD1-202ENST00000440097 GJD4Q96KN9 370 aaPredicted RBP16.71■□□□□ 0.27
LIMD1-202ENST00000440097 CCDC94Q9BW85 323 aaPredicted RBP16.71■□□□□ 0.27
LIMD1-202ENST00000440097 HAND2P61296 217 aa16.71■□□□□ 0.26
LIMD1-202ENST00000440097 TOB2Q14106 344 aaPredicted RBP16.71■□□□□ 0.26
LIMD1-202ENST00000440097 TTLL5Q6EMB2 1281 aa16.71■□□□□ 0.26
LIMD1-202ENST00000440097 APPBP2Q92624 585 aa16.71■□□□□ 0.26
LIMD1-202ENST00000440097 PUS7LQ9H0K6 701 aaKnown RBP16.71■□□□□ 0.26
LIMD1-202ENST00000440097 A0A0G2JLW4 131 aa16.7■□□□□ 0.26
LIMD1-202ENST00000440097 TTF1Q15361 905 aaPredicted RBP16.7■□□□□ 0.26
LIMD1-202ENST00000440097 DNTTIP2Q5QJE6 756 aaKnown RBP16.7■□□□□ 0.26
LIMD1-202ENST00000440097 ZSCAN25Q6NSZ9 544 aa16.7■□□□□ 0.26
LIMD1-202ENST00000440097 SRP68Q9UHB9 627 aaKnown RBP16.7■□□□□ 0.26
LIMD1-202ENST00000440097 UQCRFS1P1P0C7P4 283 aa16.7■□□□□ 0.26
LIMD1-202ENST00000440097 ZSCAN22P10073 491 aaPredicted RBP16.7■□□□□ 0.26
LIMD1-202ENST00000440097 MPNDQ8N594 471 aa16.7■□□□□ 0.26
LIMD1-202ENST00000440097 MYRIPQ8NFW9 859 aa16.7■□□□□ 0.26
LIMD1-202ENST00000440097 BRF1Q92994 677 aa16.7■□□□□ 0.26
LIMD1-202ENST00000440097 PHF14O94880 888 aa16.69■□□□□ 0.26
LIMD1-202ENST00000440097 APPP05067 770 aa16.69■□□□□ 0.26
LIMD1-202ENST00000440097 TBC1D9BQ66K14 1250 aa16.69■□□□□ 0.26
LIMD1-202ENST00000440097 STOX1Q6ZVD7 989 aa16.69■□□□□ 0.26
LIMD1-202ENST00000440097 TICAM2Q86XR7 235 aa16.69■□□□□ 0.26
LIMD1-202ENST00000440097 CDC5LQ99459 802 aaKnown RBP16.69■□□□□ 0.26
LIMD1-202ENST00000440097 ABCC12Q96J65 1359 aa16.69■□□□□ 0.26
LIMD1-202ENST00000440097 GPAA1O43292 621 aa16.69■□□□□ 0.26
LIMD1-202ENST00000440097 HMGB1P09429 215 aaKnown RBP16.69■□□□□ 0.26
LIMD1-202ENST00000440097 TSC1Q92574 1164 aa16.69■□□□□ 0.26
LIMD1-202ENST00000440097 RTCBQ9Y3I0 505 aaKnown RBP16.69■□□□□ 0.26
LIMD1-202ENST00000440097 LARP1BQ659C4 914 aaKnown RBP16.68■□□□□ 0.26
LIMD1-202ENST00000440097 CHST3Q7LGC8 479 aa16.68■□□□□ 0.26
LIMD1-202ENST00000440097 CCDC24Q8N4L8 307 aa16.68■□□□□ 0.26
LIMD1-202ENST00000440097 SETDB2Q96T68 719 aa16.68■□□□□ 0.26
LIMD1-202ENST00000440097 PIH1D3Q9NQM4 214 aaKnown RBP16.68■□□□□ 0.26
LIMD1-202ENST00000440097 ZHX1Q9UKY1 873 aaPredicted RBP16.68■□□□□ 0.26
LIMD1-202ENST00000440097 CNTNAP4Q9C0A0 1308 aa16.68■□□□□ 0.26
LIMD1-202ENST00000440097 E7EWF7 191 aa16.68■□□□□ 0.26
LIMD1-202ENST00000440097 IMMTQ16891 758 aaKnown RBP16.68■□□□□ 0.26
LIMD1-202ENST00000440097 CTNNA3Q9UI47 895 aa16.68■□□□□ 0.26
LIMD1-202ENST00000440097 CHRNDQ07001 517 aa16.67■□□□□ 0.26
LIMD1-202ENST00000440097 DHX32Q7L7V1 743 aaKnown RBP16.67■□□□□ 0.26
LIMD1-202ENST00000440097 NBPF5PQ86XG9 351 aaPredicted RBP16.67■□□□□ 0.26
LIMD1-202ENST00000440097 ANKRD18AQ8IVF6 992 aa16.67■□□□□ 0.26
LIMD1-202ENST00000440097 SPATA5Q8NB90 893 aa16.67■□□□□ 0.26
LIMD1-202ENST00000440097 SPEF2Q9C093 1822 aa16.67■□□□□ 0.26
LIMD1-202ENST00000440097 ZNF830Q96NB3 372 aaPredicted RBP16.67■□□□□ 0.26
LIMD1-202ENST00000440097 QTRT2Q9H974 415 aaKnown RBP16.67■□□□□ 0.26
LIMD1-202ENST00000440097 PODXL2Q9NZ53 605 aa16.67■□□□□ 0.26
LIMD1-202ENST00000440097 IQSEC3Q9UPP2 1182 aaPredicted RBP16.67■□□□□ 0.26
LIMD1-202ENST00000440097 RPS6KA4O75676 772 aa16.66■□□□□ 0.26
LIMD1-202ENST00000440097 FGFR2P21802 821 aa16.66■□□□□ 0.26
LIMD1-202ENST00000440097 BCAMP50895 628 aa16.66■□□□□ 0.26
LIMD1-202ENST00000440097 ATP6V1DQ9Y5K8 247 aa16.66■□□□□ 0.26
LIMD1-202ENST00000440097 FGAP02671 866 aa16.66■□□□□ 0.26
LIMD1-202ENST00000440097 ARID4AP29374 1257 aaPredicted RBP16.66■□□□□ 0.26
LIMD1-202ENST00000440097 ADD2P35612 726 aa16.66■□□□□ 0.26
LIMD1-202ENST00000440097 RASGRF1Q13972 1273 aa16.66■□□□□ 0.26
LIMD1-202ENST00000440097 C3orf67Q6ZVT6 689 aa16.66■□□□□ 0.26
LIMD1-202ENST00000440097 ZNF512BQ96KM6 892 aaPredicted RBP16.66■□□□□ 0.26
LIMD1-202ENST00000440097 ZNF532Q9HCE3 1301 aa16.66■□□□□ 0.26
LIMD1-202ENST00000440097 F13A1P00488 732 aa16.66■□□□□ 0.26
LIMD1-202ENST00000440097 SEPT12Q8IYM1 358 aa16.66■□□□□ 0.26
LIMD1-202ENST00000440097 NARFQ9UHQ1 456 aa16.66■□□□□ 0.26
LIMD1-202ENST00000440097 GADD45BO75293 160 aaPredicted RBP16.65■□□□□ 0.26
LIMD1-202ENST00000440097 ZNF710Q8N1W2 664 aa16.65■□□□□ 0.26
LIMD1-202ENST00000440097 SYAP1Q96A49 352 aaPredicted RBP16.65■□□□□ 0.26
LIMD1-202ENST00000440097 AIDAQ96BJ3 306 aa16.65■□□□□ 0.26
LIMD1-202ENST00000440097 ALDH8A1Q9H2A2 487 aaPredicted RBP16.65■□□□□ 0.26
LIMD1-202ENST00000440097 WWC3Q9ULE0 1092 aa16.65■□□□□ 0.26
LIMD1-202ENST00000440097 ZNF213O14771 459 aa16.65■□□□□ 0.26
LIMD1-202ENST00000440097 FIBPO43427 364 aa16.65■□□□□ 0.26
LIMD1-202ENST00000440097 DMTNQ08495 405 aa16.65■□□□□ 0.26
LIMD1-202ENST00000440097 FERMT3Q86UX7 667 aa16.65■□□□□ 0.26
LIMD1-202ENST00000440097 CNPY2Q9Y2B0 182 aa16.65■□□□□ 0.26
LIMD1-202ENST00000440097 PDE6AP16499 860 aa16.64■□□□□ 0.25
LIMD1-202ENST00000440097 PDCP20941 246 aa16.64■□□□□ 0.25
LIMD1-202ENST00000440097 RFC4P35249 363 aa16.64■□□□□ 0.25
LIMD1-202ENST00000440097 APOBRQ0VD83 1088 aa16.64■□□□□ 0.25
LIMD1-202ENST00000440097 MAP3K12Q12852 859 aa16.64■□□□□ 0.25
LIMD1-202ENST00000440097 VPS37DQ86XT2 251 aa16.64■□□□□ 0.25
LIMD1-202ENST00000440097 DDX11Q96FC9 970 aa16.64■□□□□ 0.25
LIMD1-202ENST00000440097 TRPC5Q9UL62 973 aaPredicted RBP16.64■□□□□ 0.25
LIMD1-202ENST00000440097 COL5A3P25940 1745 aaPredicted RBP16.64■□□□□ 0.25
LIMD1-202ENST00000440097 RC3H1Q5TC82 1133 aaKnown RBP16.64■□□□□ 0.25
LIMD1-202ENST00000440097 RALYLQ86SE5 291 aaKnown RBP16.64■□□□□ 0.25
LIMD1-202ENST00000440097 MAGEB6Q8N7X4 407 aa16.64■□□□□ 0.25
LIMD1-202ENST00000440097 PIBF1Q8WXW3 757 aa16.64■□□□□ 0.25
LIMD1-202ENST00000440097 NLRP3Q96P20 1036 aa16.64■□□□□ 0.25
LIMD1-202ENST00000440097 NYXQ9GZU5 481 aa16.64■□□□□ 0.25
LIMD1-202ENST00000440097 BCL2L12Q9HB09 334 aa16.64■□□□□ 0.25
LIMD1-202ENST00000440097 RREB1Q92766 1687 aa16.63■□□□□ 0.25
LIMD1-202ENST00000440097 USP48Q86UV5 1035 aa16.63■□□□□ 0.25
LIMD1-202ENST00000440097 C17orf53Q8N3J3 647 aaPredicted RBP16.63■□□□□ 0.25
LIMD1-202ENST00000440097 ARHGEF1Q92888 912 aaKnown RBP16.63■□□□□ 0.25
LIMD1-202ENST00000440097 GTF3C6Q969F1 213 aa16.63■□□□□ 0.25
LIMD1-202ENST00000440097 PRIMPOLQ96LW4 560 aa16.63■□□□□ 0.25
LIMD1-202ENST00000440097 MTMR6Q9Y217 621 aa16.63■□□□□ 0.25
LIMD1-202ENST00000440097 JAK2O60674 1132 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms