RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 STOX1Q6ZVD7 989 aa10.43□□□□□ -0.74
COPB1-202ENST00000439561 TRMT44Q8IYL2 757 aaKnown RBP10.43□□□□□ -0.74
COPB1-202ENST00000439561 BAG1Q99933 345 aaPredicted RBP10.43□□□□□ -0.74
COPB1-202ENST00000439561 RHOXF2Q9BQY4 288 aa10.43□□□□□ -0.74
COPB1-202ENST00000439561 PSDA5PKW4 1024 aaPredicted RBP10.43□□□□□ -0.74
COPB1-202ENST00000439561 CAPN2P17655 700 aa10.43□□□□□ -0.74
COPB1-202ENST00000439561 PDIA3P30101 505 aaKnown RBP10.43□□□□□ -0.74
COPB1-202ENST00000439561 FAM193AP78312 1265 aa10.43□□□□□ -0.74
COPB1-202ENST00000439561 LRRFIP1Q32MZ4 808 aaKnown RBP10.43□□□□□ -0.74
COPB1-202ENST00000439561 TTC39AQ5SRH9 613 aa10.43□□□□□ -0.74
COPB1-202ENST00000439561 ANKRD13DQ6ZTN6 518 aa10.43□□□□□ -0.74
COPB1-202ENST00000439561 PPFIBP1Q86W92 1011 aa10.43□□□□□ -0.74
COPB1-202ENST00000439561 FANCLQ9NW38 375 aa10.43□□□□□ -0.74
COPB1-202ENST00000439561 HOOK1Q9UJC3 728 aaKnown RBP10.43□□□□□ -0.74
COPB1-202ENST00000439561 ANKRD26Q9UPS8 1709 aa10.42□□□□□ -0.74
COPB1-202ENST00000439561 A0A0G2JS52 829 aa10.42□□□□□ -0.74
COPB1-202ENST00000439561 RNMTO43148 476 aaKnown RBP10.42□□□□□ -0.74
COPB1-202ENST00000439561 LTKP29376 864 aa10.42□□□□□ -0.74
COPB1-202ENST00000439561 ZC3H6P61129 1189 aaKnown RBP10.42□□□□□ -0.74
COPB1-202ENST00000439561 ANO1Q5XXA6 986 aa10.42□□□□□ -0.74
COPB1-202ENST00000439561 ALG1Q9BT22 464 aa10.42□□□□□ -0.74
COPB1-202ENST00000439561 SIGLEC1Q9BZZ2 1709 aa10.42□□□□□ -0.74
COPB1-202ENST00000439561 TMEM232C9JQI7 657 aa10.42□□□□□ -0.74
COPB1-202ENST00000439561 ATP5JP18859 108 aa10.42□□□□□ -0.74
COPB1-202ENST00000439561 ZNF827Q17R98 1081 aa10.42□□□□□ -0.74
COPB1-202ENST00000439561 MYSM1Q5VVJ2 828 aa10.42□□□□□ -0.74
COPB1-202ENST00000439561 FMR1NBQ8N0W7 255 aaPredicted RBP10.42□□□□□ -0.74
COPB1-202ENST00000439561 SMARCE1Q969G3 411 aa10.42□□□□□ -0.74
COPB1-202ENST00000439561 CLIC6Q96NY7 704 aa10.42□□□□□ -0.74
COPB1-202ENST00000439561 SRRTQ9BXP5 876 aaKnown RBP10.42□□□□□ -0.74
COPB1-202ENST00000439561 RSPH14Q9UHP6 348 aa10.42□□□□□ -0.74
COPB1-202ENST00000439561 A2ML1A8K2U0 1454 aa10.42□□□□□ -0.74
COPB1-202ENST00000439561 STX17P56962 302 aa10.42□□□□□ -0.74
COPB1-202ENST00000439561 RAD51AP2Q09MP3 1159 aa10.42□□□□□ -0.74
COPB1-202ENST00000439561 GCKRQ14397 625 aa10.42□□□□□ -0.74
COPB1-202ENST00000439561 DHX8Q14562 1220 aaKnown RBP10.42□□□□□ -0.74
COPB1-202ENST00000439561 CCDC102BQ68D86 513 aa10.42□□□□□ -0.74
COPB1-202ENST00000439561 KBTBD3Q8NAB2 608 aa10.42□□□□□ -0.74
COPB1-202ENST00000439561 LINC00301Q8NCQ3 95 aa10.42□□□□□ -0.74
COPB1-202ENST00000439561 DPF2Q92785 391 aa10.42□□□□□ -0.74
COPB1-202ENST00000439561 DDX21Q9NR30 783 aaKnown RBP eCLIP10.42□□□□□ -0.74
COPB1-202ENST00000439561 BABAM1Q9NWV8 329 aa10.42□□□□□ -0.74
COPB1-202ENST00000439561 USP42Q9H9J4 1324 aaKnown RBP10.41□□□□□ -0.74
COPB1-202ENST00000439561 KDRP35968 1356 aa10.41□□□□□ -0.74
COPB1-202ENST00000439561 PLA2G4AP47712 749 aa10.41□□□□□ -0.74
COPB1-202ENST00000439561 NBPF11Q86T75 865 aa10.41□□□□□ -0.74
COPB1-202ENST00000439561 GOLGA1Q92805 767 aa10.41□□□□□ -0.74
COPB1-202ENST00000439561 ZNF594Q96JF6 807 aaPredicted RBP10.41□□□□□ -0.74
COPB1-202ENST00000439561 AIFM3Q96NN9 605 aa10.41□□□□□ -0.74
COPB1-202ENST00000439561 OSBPL5Q9H0X9 879 aaPredicted RBP10.41□□□□□ -0.74
COPB1-202ENST00000439561 RASSF4Q9H2L5 321 aa10.41□□□□□ -0.74
COPB1-202ENST00000439561 PPP2R2CQ9Y2T4 447 aa10.41□□□□□ -0.74
COPB1-202ENST00000439561 FHOD1Q9Y613 1164 aa10.41□□□□□ -0.74
COPB1-202ENST00000439561 CEP170BQ9Y4F5 1589 aaPredicted RBP10.41□□□□□ -0.74
COPB1-202ENST00000439561 ZNF213O14771 459 aa10.41□□□□□ -0.74
COPB1-202ENST00000439561 HOXB7P09629 217 aa10.41□□□□□ -0.74
COPB1-202ENST00000439561 CYP2C19P33261 490 aa10.41□□□□□ -0.74
COPB1-202ENST00000439561 SAFBQ15424 915 aaKnown RBP eCLIP10.41□□□□□ -0.74
COPB1-202ENST00000439561 KLHL34Q8N239 644 aa10.41□□□□□ -0.74
COPB1-202ENST00000439561 PHKBQ93100 1093 aa10.41□□□□□ -0.74
COPB1-202ENST00000439561 CARMIL3Q8ND23 1372 aa10.41□□□□□ -0.74
COPB1-202ENST00000439561 SETD1BQ9UPS6 1966 aaKnown RBP10.41□□□□□ -0.74
COPB1-202ENST00000439561 NEURL1BA8MQ27 555 aa10.4□□□□□ -0.74
COPB1-202ENST00000439561 KIF5CO60282 957 aa10.4□□□□□ -0.74
COPB1-202ENST00000439561 CTDNEP1O95476 244 aa10.4□□□□□ -0.74
COPB1-202ENST00000439561 AKAP17AQ02040 695 aaKnown RBP10.4□□□□□ -0.74
COPB1-202ENST00000439561 KCNB2Q92953 911 aa10.4□□□□□ -0.74
COPB1-202ENST00000439561 TSPYL1Q9H0U9 437 aa10.4□□□□□ -0.74
COPB1-202ENST00000439561 MYO5BQ9ULV0 1848 aa10.4□□□□□ -0.74
COPB1-202ENST00000439561 OVOS2A0A0J9YW53 1432 aa10.4□□□□□ -0.74
COPB1-202ENST00000439561 OVOS2Q6IE36 1432 aa10.4□□□□□ -0.74
COPB1-202ENST00000439561 EFCAB8A8MWE9 144 aa10.4□□□□□ -0.74
COPB1-202ENST00000439561 ANKRD65E5RJM6 399 aa10.4□□□□□ -0.74
COPB1-202ENST00000439561 ERLIN1O75477 346 aa10.4□□□□□ -0.74
COPB1-202ENST00000439561 EIF3JO75822 258 aaKnown RBP10.4□□□□□ -0.74
COPB1-202ENST00000439561 HSPD1P10809 573 aaKnown RBP10.4□□□□□ -0.74
COPB1-202ENST00000439561 NOM1Q5C9Z4 860 aaKnown RBP10.4□□□□□ -0.74
COPB1-202ENST00000439561 CCDC158Q5M9N0 1113 aa10.4□□□□□ -0.74
COPB1-202ENST00000439561 NFATC2IPQ8NCF5 419 aa10.4□□□□□ -0.74
COPB1-202ENST00000439561 CEP126Q9P2H0 1117 aa10.4□□□□□ -0.74
COPB1-202ENST00000439561 PHF8Q9UPP1 1060 aa10.4□□□□□ -0.74
COPB1-202ENST00000439561 IGKV5-2P06315 115 aa10.4□□□□□ -0.75
COPB1-202ENST00000439561 AMOTQ4VCS5 1084 aa10.4□□□□□ -0.75
COPB1-202ENST00000439561 ATL3Q6DD88 541 aa10.4□□□□□ -0.75
COPB1-202ENST00000439561 MYL10Q9BUA6 226 aa10.4□□□□□ -0.75
COPB1-202ENST00000439561 ZBTB3Q9H5J0 574 aa10.4□□□□□ -0.75
COPB1-202ENST00000439561 RTEL1Q9NZ71 1219 aa10.4□□□□□ -0.75
COPB1-202ENST00000439561 DLC1Q96QB1 1528 aa10.39□□□□□ -0.75
COPB1-202ENST00000439561 IDH1O75874 414 aaKnown RBP10.39□□□□□ -0.75
COPB1-202ENST00000439561 H2AFXP16104 143 aaPredicted RBP10.39□□□□□ -0.75
COPB1-202ENST00000439561 METAP2P50579 478 aaKnown RBP eCLIP10.39□□□□□ -0.752e-6■■■■□ 21.6
COPB1-202ENST00000439561 ZNF569Q5MCW4 686 aa10.39□□□□□ -0.75
COPB1-202ENST00000439561 ENGASEQ8NFI3 743 aa10.39□□□□□ -0.75
COPB1-202ENST00000439561 PARD6BQ9BYG5 372 aa10.39□□□□□ -0.75
COPB1-202ENST00000439561 NFE2L3Q9Y4A8 694 aa10.39□□□□□ -0.75
COPB1-202ENST00000439561 ARHGAP6O43182 974 aa10.39□□□□□ -0.75
COPB1-202ENST00000439561 RASSF8Q8NHQ8 419 aa10.39□□□□□ -0.75
COPB1-202ENST00000439561 ANKRD24Q8TF21 1146 aa10.39□□□□□ -0.75
COPB1-202ENST00000439561 DHX58Q96C10 678 aa10.39□□□□□ -0.75
COPB1-202ENST00000439561 KAZALD1Q96I82 304 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms