RNA–Protein interactions for RNA: ENST00000439514.1

HLA-W-207, Transcript of major histocompatibility complex, class I, W (pseudogene), humanhuman

BASIC

Gene HLA-W, Length 771 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-W-207ENST00000439514 JMYQ8N9B5 988 aa16.28■□□□□ 0.2
HLA-W-207ENST00000439514 MTMR14Q8NCE2 650 aa16.28■□□□□ 0.2
HLA-W-207ENST00000439514 GLIS2Q9BZE0 524 aaPredicted RBP16.28■□□□□ 0.2
HLA-W-207ENST00000439514 SIL1Q9H173 461 aa16.28■□□□□ 0.2
HLA-W-207ENST00000439514 GGA3Q9NZ52 723 aa16.28■□□□□ 0.2
HLA-W-207ENST00000439514 ABT1Q9ULW3 272 aaKnown RBP16.28■□□□□ 0.2
HLA-W-207ENST00000439514 SUGT1Q9Y2Z0 365 aa16.28■□□□□ 0.2
HLA-W-207ENST00000439514 MAST3O60307 1309 aa16.27■□□□□ 0.2
HLA-W-207ENST00000439514 RASSF10A6NK89 507 aa16.27■□□□□ 0.2
HLA-W-207ENST00000439514 SEMA3EO15041 775 aa16.27■□□□□ 0.2
HLA-W-207ENST00000439514 ECE1P42892 770 aa16.27■□□□□ 0.2
HLA-W-207ENST00000439514 G3BP1Q13283 466 aaKnown RBP eCLIP16.27■□□□□ 0.2
HLA-W-207ENST00000439514 DLGAP5Q15398 846 aa16.27■□□□□ 0.2
HLA-W-207ENST00000439514 MFSD14BQ5SR56 506 aa16.27■□□□□ 0.2
HLA-W-207ENST00000439514 APOBEC3FQ8IUX4 373 aaKnown RBP16.27■□□□□ 0.2
HLA-W-207ENST00000439514 HHIPL1Q96JK4 782 aa16.27■□□□□ 0.2
HLA-W-207ENST00000439514 DDX19BQ9UMR2 479 aa16.27■□□□□ 0.2
HLA-W-207ENST00000439514 ZNF646O15015 1829 aaPredicted RBP16.26■□□□□ 0.19
HLA-W-207ENST00000439514 ZBTB7BO15156 539 aaPredicted RBP16.26■□□□□ 0.19
HLA-W-207ENST00000439514 CELF2O95319 508 aaKnown RBP16.26■□□□□ 0.19
HLA-W-207ENST00000439514 EGFRP00533 1210 aa16.26■□□□□ 0.19
HLA-W-207ENST00000439514 DEFB115Q30KQ5 88 aa16.26■□□□□ 0.19
HLA-W-207ENST00000439514 USP48Q86UV5 1035 aa16.26■□□□□ 0.19
HLA-W-207ENST00000439514 WDR66Q8TBY9 1149 aa16.26■□□□□ 0.19
HLA-W-207ENST00000439514 TNNQ9UQP3 1299 aa16.26■□□□□ 0.19
HLA-W-207ENST00000439514 COL1A1P02452 1464 aaPredicted RBP16.25■□□□□ 0.19
HLA-W-207ENST00000439514 TRAF5O00463 557 aa16.25■□□□□ 0.19
HLA-W-207ENST00000439514 WNT10BO00744 389 aa16.25■□□□□ 0.19
HLA-W-207ENST00000439514 HTRA3P83110 453 aa16.25■□□□□ 0.19
HLA-W-207ENST00000439514 ATP8B2P98198 1209 aa16.25■□□□□ 0.19
HLA-W-207ENST00000439514 HDLBPQ00341 1268 aaKnown RBP16.25■□□□□ 0.19
HLA-W-207ENST00000439514 PDE3AQ14432 1141 aa16.25■□□□□ 0.19
HLA-W-207ENST00000439514 ANGEL2Q5VTE6 544 aaKnown RBP16.25■□□□□ 0.19
HLA-W-207ENST00000439514 SERPINA10Q9UK55 444 aa16.25■□□□□ 0.19
HLA-W-207ENST00000439514 PA2G4Q9UQ80 394 aaKnown RBP16.25■□□□□ 0.19
HLA-W-207ENST00000439514 TLL2Q9Y6L7 1015 aa16.25■□□□□ 0.19
HLA-W-207ENST00000439514 RLBP1P12271 317 aa16.24■□□□□ 0.19
HLA-W-207ENST00000439514 NF2P35240 595 aa16.24■□□□□ 0.19
HLA-W-207ENST00000439514 FKBP1BP68106 108 aa16.24■□□□□ 0.19
HLA-W-207ENST00000439514 MVPQ14764 893 aaKnown RBP16.24■□□□□ 0.19
HLA-W-207ENST00000439514 CERS5Q8N5B7 392 aa16.24■□□□□ 0.19
HLA-W-207ENST00000439514 C2orf69Q8N8R5 385 aa16.24■□□□□ 0.19
HLA-W-207ENST00000439514 SSH3Q8TE77 659 aa16.24■□□□□ 0.19
HLA-W-207ENST00000439514 MXD3Q9BW11 206 aa16.24■□□□□ 0.19
HLA-W-207ENST00000439514 ARAP2Q8WZ64 1704 aa16.23■□□□□ 0.19
HLA-W-207ENST00000439514 BCAMP50895 628 aa16.23■□□□□ 0.19
HLA-W-207ENST00000439514 POLA2Q14181 598 aa16.23■□□□□ 0.19
HLA-W-207ENST00000439514 CST9Q5W186 159 aa16.23■□□□□ 0.19
HLA-W-207ENST00000439514 ZGPATQ8N5A5 531 aaKnown RBP16.23■□□□□ 0.19
HLA-W-207ENST00000439514 ZBED3Q96IU2 234 aaPredicted RBP16.23■□□□□ 0.19
HLA-W-207ENST00000439514 MRIQ9BWK5 157 aa16.23■□□□□ 0.19
HLA-W-207ENST00000439514 MKRN1Q9UHC7 482 aaKnown RBP16.23■□□□□ 0.19
HLA-W-207ENST00000439514 DENND2AQ9ULE3 1009 aa16.23■□□□□ 0.19
HLA-W-207ENST00000439514 TTF2Q9UNY4 1162 aaKnown RBP16.23■□□□□ 0.19
HLA-W-207ENST00000439514 PPP2R3BQ9Y5P8 575 aa16.23■□□□□ 0.19
HLA-W-207ENST00000439514 PDS5AQ29RF7 1337 aaKnown RBP16.22■□□□□ 0.19
HLA-W-207ENST00000439514 PNMA6EA0A0J9YXQ4 647 aa16.22■□□□□ 0.19
HLA-W-207ENST00000439514 HMMRO75330 724 aa16.22■□□□□ 0.19
HLA-W-207ENST00000439514 OS9Q13438 667 aaPredicted RBP16.22■□□□□ 0.19
HLA-W-207ENST00000439514 TNFAIP1Q13829 316 aa16.22■□□□□ 0.19
HLA-W-207ENST00000439514 NBPF9Q3BBW0 867 aa16.22■□□□□ 0.19
HLA-W-207ENST00000439514 CFAP100Q494V2 611 aa16.22■□□□□ 0.19
HLA-W-207ENST00000439514 HSP90AB4PQ58FF6 505 aa16.22■□□□□ 0.19
HLA-W-207ENST00000439514 SAPCD2Q86UD0 394 aa16.22■□□□□ 0.19
HLA-W-207ENST00000439514 PANK1Q8TE04 598 aa16.22■□□□□ 0.19
HLA-W-207ENST00000439514 ZNF408Q9H9D4 720 aa16.22■□□□□ 0.19
HLA-W-207ENST00000439514 GPR108Q9NPR9 543 aa16.22■□□□□ 0.19
HLA-W-207ENST00000439514 SPDYE2BA6NHP3 402 aa16.21■□□□□ 0.19
HLA-W-207ENST00000439514 ADM5C9JUS6 153 aa16.21■□□□□ 0.19
HLA-W-207ENST00000439514 F8W031 263 aaPredicted RBP16.21■□□□□ 0.19
HLA-W-207ENST00000439514 SPDYE6P0CI01 402 aa16.21■□□□□ 0.19
HLA-W-207ENST00000439514 RBM5P52756 815 aaKnown RBP eCLIP16.21■□□□□ 0.19
HLA-W-207ENST00000439514 CHAF1AQ13111 956 aaPredicted RBP16.21■□□□□ 0.19
HLA-W-207ENST00000439514 ERC1Q8IUD2 1116 aa16.21■□□□□ 0.19
HLA-W-207ENST00000439514 RPAP2Q8IXW5 612 aaPredicted RBP16.21■□□□□ 0.19
HLA-W-207ENST00000439514 CDCA5Q96FF9 252 aa16.21■□□□□ 0.19
HLA-W-207ENST00000439514 GBA2Q9HCG7 927 aaPredicted RBP16.21■□□□□ 0.19
HLA-W-207ENST00000439514 A0A1B0GUL7 405 aa16.2■□□□□ 0.18
HLA-W-207ENST00000439514 TFCP2Q12800 502 aa16.2■□□□□ 0.18
HLA-W-207ENST00000439514 GORABQ5T7V8 394 aa16.2■□□□□ 0.18
HLA-W-207ENST00000439514 TEKT1Q969V4 418 aa16.2■□□□□ 0.18
HLA-W-207ENST00000439514 NOP58Q9Y2X3 529 aaKnown RBP16.2■□□□□ 0.18
HLA-W-207ENST00000439514 SALL1Q9NSC2 1324 aa16.19■□□□□ 0.18
HLA-W-207ENST00000439514 SURF6O75683 361 aaKnown RBP16.19■□□□□ 0.18
HLA-W-207ENST00000439514 CCDC102BQ68D86 513 aa16.19■□□□□ 0.18
HLA-W-207ENST00000439514 PAXIP1Q6ZW49 1069 aaPredicted RBP16.19■□□□□ 0.18
HLA-W-207ENST00000439514 IQSEC3Q9UPP2 1182 aaPredicted RBP16.19■□□□□ 0.18
HLA-W-207ENST00000439514 JAG2Q9Y219 1238 aa16.19■□□□□ 0.18
HLA-W-207ENST00000439514 MYH13Q9UKX3 1938 aa16.19■□□□□ 0.18
HLA-W-207ENST00000439514 WDR33Q9C0J8 1336 aaKnown RBP16.19■□□□□ 0.18
HLA-W-207ENST00000439514 POLR2AP24928 1970 aaKnown RBP16.18■□□□□ 0.18
HLA-W-207ENST00000439514 ECM29Q5VYK3 1845 aa16.18■□□□□ 0.18
HLA-W-207ENST00000439514 IGSF3O75054 1194 aa16.18■□□□□ 0.18
HLA-W-207ENST00000439514 MAP2K2P36507 400 aa16.18■□□□□ 0.18
HLA-W-207ENST00000439514 CRKP46108 304 aa16.18■□□□□ 0.18
HLA-W-207ENST00000439514 TNNI2P48788 182 aa16.18■□□□□ 0.18
HLA-W-207ENST00000439514 VEGFBP49765 207 aa16.18■□□□□ 0.18
HLA-W-207ENST00000439514 HUNKP57058 714 aa16.18■□□□□ 0.18
HLA-W-207ENST00000439514 MAP2K1Q02750 393 aaPredicted RBP16.18■□□□□ 0.18
HLA-W-207ENST00000439514 SPTY2D1Q68D10 685 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms