RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 HOXB7P09629 217 aa17.03■□□□□ 0.32
TSC2-206ENST00000439117 PDE4BQ07343 736 aa17.03■□□□□ 0.32
TSC2-206ENST00000439117 CCT2P78371 535 aaKnown RBP17.03■□□□□ 0.32
TSC2-206ENST00000439117 PPP2R3AQ06190 1150 aa17.03■□□□□ 0.32
TSC2-206ENST00000439117 CCDC96Q2M329 555 aa17.03■□□□□ 0.32
TSC2-206ENST00000439117 CCDC129Q6ZRS4 1044 aa17.03■□□□□ 0.32
TSC2-206ENST00000439117 MLH3Q9UHC1 1453 aa17.03■□□□□ 0.32
TSC2-206ENST00000439117 RNF123Q5XPI4 1314 aa17.02■□□□□ 0.32
TSC2-206ENST00000439117 KRT83P78385 493 aa17.02■□□□□ 0.32
TSC2-206ENST00000439117 TUBB2AQ13885 445 aa17.02■□□□□ 0.32
TSC2-206ENST00000439117 MFSD6Q6ZSS7 791 aa17.02■□□□□ 0.32
TSC2-206ENST00000439117 NCOA7Q8NI08 942 aa17.02■□□□□ 0.32
TSC2-206ENST00000439117 TUBB2BQ9BVA1 445 aa17.02■□□□□ 0.32
TSC2-206ENST00000439117 VGLL3A8MV65 326 aa17.02■□□□□ 0.32
TSC2-206ENST00000439117 KRT86O43790 486 aa17.02■□□□□ 0.32
TSC2-206ENST00000439117 KIAA0753Q2KHM9 967 aa17.02■□□□□ 0.32
TSC2-206ENST00000439117 CPLX4Q7Z7G2 160 aa17.02■□□□□ 0.32
TSC2-206ENST00000439117 CHL1O00533 1208 aa17.02■□□□□ 0.31
TSC2-206ENST00000439117 ZNF500O60304 480 aaPredicted RBP17.02■□□□□ 0.31
TSC2-206ENST00000439117 NOP2P46087 812 aaKnown RBP17.02■□□□□ 0.31
TSC2-206ENST00000439117 VAV2P52735 878 aa17.02■□□□□ 0.31
TSC2-206ENST00000439117 TMEM67Q5HYA8 995 aa17.02■□□□□ 0.31
TSC2-206ENST00000439117 MKRN1Q9UHC7 482 aaKnown RBP17.02■□□□□ 0.31
TSC2-206ENST00000439117 SAMD9LQ8IVG5 1584 aa17.02■□□□□ 0.31
TSC2-206ENST00000439117 IRS4O14654 1257 aaPredicted RBP17.02■□□□□ 0.31
TSC2-206ENST00000439117 CLGNO14967 610 aa17.02■□□□□ 0.31
TSC2-206ENST00000439117 ZEB2O60315 1214 aa17.02■□□□□ 0.31
TSC2-206ENST00000439117 KIF4AO95239 1232 aa17.02■□□□□ 0.31
TSC2-206ENST00000439117 INPP5BP32019 993 aa17.02■□□□□ 0.31
TSC2-206ENST00000439117 SSRP1Q08945 709 aaKnown RBP17.02■□□□□ 0.31
TSC2-206ENST00000439117 ISM2Q6H9L7 571 aa17.02■□□□□ 0.31
TSC2-206ENST00000439117 CRNKL1Q9BZJ0 848 aaKnown RBP17.02■□□□□ 0.31
TSC2-206ENST00000439117 INSRP06213 1382 aa17.02■□□□□ 0.31
TSC2-206ENST00000439117 TRIM21P19474 475 aaKnown RBP17.01■□□□□ 0.31
TSC2-206ENST00000439117 AFAP1L1Q8TED9 768 aa17.01■□□□□ 0.31
TSC2-206ENST00000439117 DRC1Q96MC2 740 aa17.01■□□□□ 0.31
TSC2-206ENST00000439117 USP16Q9Y5T5 823 aa17.01■□□□□ 0.31
TSC2-206ENST00000439117 WWC2Q6AWC2 1192 aa17.01■□□□□ 0.31
TSC2-206ENST00000439117 DAAM2Q86T65 1068 aa17.01■□□□□ 0.31
TSC2-206ENST00000439117 CCDC50Q8IVM0 306 aa17.01■□□□□ 0.31
TSC2-206ENST00000439117 MAGI2Q86UL8 1455 aa17.01■□□□□ 0.31
TSC2-206ENST00000439117 SBNO2Q9Y2G9 1366 aa17.01■□□□□ 0.31
TSC2-206ENST00000439117 GSTO1P78417 241 aa17.01■□□□□ 0.31
TSC2-206ENST00000439117 ESYT1Q9BSJ8 1104 aa17.01■□□□□ 0.31
TSC2-206ENST00000439117 TSPY2A6NKD2 308 aa17.01■□□□□ 0.31
TSC2-206ENST00000439117 AMPD3Q01432 767 aa17.01■□□□□ 0.31
TSC2-206ENST00000439117 RMND1Q9NWS8 449 aa17.01■□□□□ 0.31
TSC2-206ENST00000439117 IARSP41252 1262 aaKnown RBP17■□□□□ 0.31
TSC2-206ENST00000439117 ZGPATQ8N5A5 531 aaKnown RBP17■□□□□ 0.31
TSC2-206ENST00000439117 TRIM35Q9UPQ4 493 aa17■□□□□ 0.31
TSC2-206ENST00000439117 WDR66Q8TBY9 1149 aa17■□□□□ 0.31
TSC2-206ENST00000439117 CNKSR2Q8WXI2 1034 aa17■□□□□ 0.31
TSC2-206ENST00000439117 SELENOOQ9BVL4 669 aa17■□□□□ 0.31
TSC2-206ENST00000439117 IQSEC3Q9UPP2 1182 aaPredicted RBP17■□□□□ 0.31
TSC2-206ENST00000439117 CYP7A1P22680 504 aa16.99■□□□□ 0.31
TSC2-206ENST00000439117 LMOD1P29536 600 aaPredicted RBP16.99■□□□□ 0.31
TSC2-206ENST00000439117 C16orf71Q8IYS4 520 aaPredicted RBP16.99■□□□□ 0.31
TSC2-206ENST00000439117 TTC41PQ6P2S7 1318 aa16.99■□□□□ 0.31
TSC2-206ENST00000439117 MAP2K2P36507 400 aa16.99■□□□□ 0.31
TSC2-206ENST00000439117 PRPF4BQ13523 1007 aaKnown RBP16.99■□□□□ 0.31
TSC2-206ENST00000439117 G2E3Q7L622 706 aa16.99■□□□□ 0.31
TSC2-206ENST00000439117 CTNNBL1Q8WYA6 563 aaPredicted RBP16.99■□□□□ 0.31
TSC2-206ENST00000439117 LGR6Q9HBX8 967 aa16.99■□□□□ 0.31
TSC2-206ENST00000439117 HLA-DOAP06340 250 aa16.99■□□□□ 0.31
TSC2-206ENST00000439117 KIF5AQ12840 1032 aa16.99■□□□□ 0.31
TSC2-206ENST00000439117 UTP14CQ5TAP6 766 aaKnown RBP16.99■□□□□ 0.31
TSC2-206ENST00000439117 DDX17Q92841 729 aaKnown RBP16.99■□□□□ 0.31
TSC2-206ENST00000439117 LACTBP83111 547 aaPredicted RBP16.99■□□□□ 0.31
TSC2-206ENST00000439117 MCMDC2Q4G0Z9 681 aa16.98■□□□□ 0.31
TSC2-206ENST00000439117 NDUFAB1O14561 156 aa16.98■□□□□ 0.31
TSC2-206ENST00000439117 RHOXF2BP0C7M4 288 aa16.98■□□□□ 0.31
TSC2-206ENST00000439117 ARHGAP25P42331 645 aa16.98■□□□□ 0.31
TSC2-206ENST00000439117 MYCBPQ99417 103 aaPredicted RBP16.98■□□□□ 0.31
TSC2-206ENST00000439117 RHOXF2Q9BQY4 288 aa16.98■□□□□ 0.31
TSC2-206ENST00000439117 BCL2L12Q9HB09 334 aa16.98■□□□□ 0.31
TSC2-206ENST00000439117 PUF60Q9UHX1 559 aaKnown RBP16.98■□□□□ 0.31
TSC2-206ENST00000439117 MICU3Q86XE3 530 aa16.98■□□□□ 0.31
TSC2-206ENST00000439117 CCDC77Q9BR77 488 aa16.98■□□□□ 0.31
TSC2-206ENST00000439117 TFCP2L1Q9NZI6 479 aa16.98■□□□□ 0.31
TSC2-206ENST00000439117 TTC37Q6PGP7 1564 aa16.98■□□□□ 0.31
TSC2-206ENST00000439117 CCDC194A0A1B0GVG4 234 aa16.98■□□□□ 0.31
TSC2-206ENST00000439117 BMP15O95972 392 aa16.98■□□□□ 0.31
TSC2-206ENST00000439117 CLNS1AP54105 237 aaKnown RBP16.98■□□□□ 0.31
TSC2-206ENST00000439117 NLRP5P59047 1200 aa16.98■□□□□ 0.31
TSC2-206ENST00000439117 CFAP58Q5T655 872 aa16.98■□□□□ 0.31
TSC2-206ENST00000439117 PPP1R9BQ96SB3 815 aa16.98■□□□□ 0.31
TSC2-206ENST00000439117 SLC52A2Q9HAB3 445 aa16.98■□□□□ 0.31
TSC2-206ENST00000439117 PLXNC1O60486 1568 aa16.97■□□□□ 0.31
TSC2-206ENST00000439117 MYO1BO43795 1136 aa16.97■□□□□ 0.31
TSC2-206ENST00000439117 SLC9C2Q5TAH2 1124 aa16.97■□□□□ 0.31
TSC2-206ENST00000439117 NECAB1Q8N987 351 aa16.97■□□□□ 0.31
TSC2-206ENST00000439117 IFNKQ9P0W0 207 aa16.97■□□□□ 0.31
TSC2-206ENST00000439117 SAMD15Q9P1V8 674 aa16.97■□□□□ 0.31
TSC2-206ENST00000439117 CCDC40Q4G0X9 1142 aa16.97■□□□□ 0.31
TSC2-206ENST00000439117 ZNF569Q5MCW4 686 aa16.97■□□□□ 0.31
TSC2-206ENST00000439117 PLBD2Q8NHP8 589 aa16.97■□□□□ 0.31
TSC2-206ENST00000439117 PLVAPQ9BX97 442 aa16.97■□□□□ 0.31
TSC2-206ENST00000439117 STIM2Q9P246 746 aa16.97■□□□□ 0.31
TSC2-206ENST00000439117 RBM8AQ9Y5S9 174 aaKnown RBP16.97■□□□□ 0.31
TSC2-206ENST00000439117 ELF2Q15723 593 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms