RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 DDX10Q13206 875 aaKnown RBP10.12□□□□□ -0.79
LINC00578-201ENST00000439009 UBE3BQ7Z3V4 1068 aa10.12□□□□□ -0.79
LINC00578-201ENST00000439009 FBXW7Q969H0 707 aa10.12□□□□□ -0.79
LINC00578-201ENST00000439009 ERO1AQ96HE7 468 aa10.12□□□□□ -0.79
LINC00578-201ENST00000439009 MPHOSPH8Q99549 860 aa10.12□□□□□ -0.79
LINC00578-201ENST00000439009 PTPN18Q99952 460 aa10.12□□□□□ -0.79
LINC00578-201ENST00000439009 FZD1Q9UP38 647 aa10.12□□□□□ -0.79
LINC00578-201ENST00000439009 SSC5DA1L4H1 1573 aa10.12□□□□□ -0.79
LINC00578-201ENST00000439009 ZNF646O15015 1829 aaPredicted RBP10.12□□□□□ -0.79
LINC00578-201ENST00000439009 GJA5P36382 358 aa10.11□□□□□ -0.79
LINC00578-201ENST00000439009 CHRNDQ07001 517 aa10.11□□□□□ -0.79
LINC00578-201ENST00000439009 OTUD7BQ6GQQ9 843 aa10.11□□□□□ -0.79
LINC00578-201ENST00000439009 G2E3Q7L622 706 aa10.11□□□□□ -0.79
LINC00578-201ENST00000439009 PRMT6Q96LA8 375 aaPredicted RBP10.11□□□□□ -0.79
LINC00578-201ENST00000439009 STK31Q9BXU1 1019 aa10.11□□□□□ -0.79
LINC00578-201ENST00000439009 MKI67P46013 3256 aaKnown RBP10.11□□□□□ -0.79
LINC00578-201ENST00000439009 MYO1BO43795 1136 aa10.1□□□□□ -0.79
LINC00578-201ENST00000439009 SLC4A2P04920 1241 aa10.1□□□□□ -0.79
LINC00578-201ENST00000439009 IREB2P48200 963 aaKnown RBP10.1□□□□□ -0.79
LINC00578-201ENST00000439009 SP3Q02447 781 aa10.1□□□□□ -0.79
LINC00578-201ENST00000439009 CRHR2Q13324 411 aa10.1□□□□□ -0.79
LINC00578-201ENST00000439009 CCDC27Q2M243 656 aa10.1□□□□□ -0.79
LINC00578-201ENST00000439009 CFAP100Q494V2 611 aa10.1□□□□□ -0.79
LINC00578-201ENST00000439009 NBPF12Q5TAG4 269 aaPredicted RBP10.1□□□□□ -0.79
LINC00578-201ENST00000439009 ANKRD13AQ8IZ07 590 aa10.1□□□□□ -0.79
LINC00578-201ENST00000439009 LINS1Q8NG48 757 aa10.1□□□□□ -0.79
LINC00578-201ENST00000439009 MS4A4AQ96JQ5 239 aa10.1□□□□□ -0.79
LINC00578-201ENST00000439009 PRKRIP1Q9H875 184 aaPredicted RBP10.1□□□□□ -0.79
LINC00578-201ENST00000439009 EFCC1Q9HA90 598 aa10.1□□□□□ -0.79
LINC00578-201ENST00000439009 PCDHAC2Q9Y5I4 1007 aa10.1□□□□□ -0.79
LINC00578-201ENST00000439009 ANKRD18BA2A2Z9 1011 aa10.09□□□□□ -0.79
LINC00578-201ENST00000439009 SNAP23O00161 211 aa10.09□□□□□ -0.79
LINC00578-201ENST00000439009 KCNJ4P48050 445 aa10.09□□□□□ -0.79
LINC00578-201ENST00000439009 FOXO4P98177 505 aa10.09□□□□□ -0.79
LINC00578-201ENST00000439009 CAP1Q01518 475 aa10.09□□□□□ -0.79
LINC00578-201ENST00000439009 RASA3Q14644 834 aa10.09□□□□□ -0.79
LINC00578-201ENST00000439009 NCBP3Q53F19 620 aaKnown RBP10.09□□□□□ -0.79
LINC00578-201ENST00000439009 CD99L2Q8TCZ2 262 aa10.09□□□□□ -0.79
LINC00578-201ENST00000439009 MYH16Q9H6N6 1097 aa10.09□□□□□ -0.79
LINC00578-201ENST00000439009 AOX1Q06278 1338 aa10.08□□□□□ -0.8
LINC00578-201ENST00000439009 FAM205AQ6ZU69 1335 aa10.08□□□□□ -0.8
LINC00578-201ENST00000439009 CLRN2A0PK11 232 aa10.08□□□□□ -0.8
LINC00578-201ENST00000439009 TAF5LO75529 589 aa10.08□□□□□ -0.8
LINC00578-201ENST00000439009 EN2P19622 333 aaPredicted RBP10.08□□□□□ -0.8
LINC00578-201ENST00000439009 FXR1P51114 621 aaKnown RBP eCLIP10.08□□□□□ -0.8
LINC00578-201ENST00000439009 FLIIQ13045 1269 aa10.08□□□□□ -0.8
LINC00578-201ENST00000439009 TWISTNBQ3B726 338 aaPredicted RBP10.08□□□□□ -0.8
LINC00578-201ENST00000439009 ZNF804AQ7Z570 1209 aa10.08□□□□□ -0.8
LINC00578-201ENST00000439009 DNAAF4Q8WXU2 420 aa10.08□□□□□ -0.8
LINC00578-201ENST00000439009 TSR2Q969E8 191 aaKnown RBP10.08□□□□□ -0.8
LINC00578-201ENST00000439009 ZNF333Q96JL9 665 aa10.08□□□□□ -0.8
LINC00578-201ENST00000439009 TEPSINQ96N21 525 aa10.08□□□□□ -0.8
LINC00578-201ENST00000439009 KIAA0100Q14667 2235 aaKnown RBP10.08□□□□□ -0.8
LINC00578-201ENST00000439009 IL16Q14005 1332 aa10.07□□□□□ -0.8
LINC00578-201ENST00000439009 IFIT5Q13325 482 aaKnown RBP10.07□□□□□ -0.8
LINC00578-201ENST00000439009 TNFAIP1Q13829 316 aa10.07□□□□□ -0.8
LINC00578-201ENST00000439009 ARHGEF6Q15052 776 aa10.07□□□□□ -0.8
LINC00578-201ENST00000439009 SPDYE2Q495Y8 402 aa10.07□□□□□ -0.8
LINC00578-201ENST00000439009 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.07□□□□□ -0.8
LINC00578-201ENST00000439009 HELBQ8NG08 1087 aaPredicted RBP10.07□□□□□ -0.8
LINC00578-201ENST00000439009 TDRD7Q8NHU6 1098 aaKnown RBP10.07□□□□□ -0.8
LINC00578-201ENST00000439009 ZNF70Q9UC06 446 aaPredicted RBP10.07□□□□□ -0.8
LINC00578-201ENST00000439009 SERPINA10Q9UK55 444 aa10.07□□□□□ -0.8
LINC00578-201ENST00000439009 F8W031 263 aaPredicted RBP10.06□□□□□ -0.8
LINC00578-201ENST00000439009 GTF2A2P52657 109 aa10.06□□□□□ -0.8
LINC00578-201ENST00000439009 WWC1Q8IX03 1113 aa10.06□□□□□ -0.8
LINC00578-201ENST00000439009 BRI3BPQ8WY22 251 aa10.06□□□□□ -0.8
LINC00578-201ENST00000439009 OPTNQ96CV9 577 aa10.06□□□□□ -0.8
LINC00578-201ENST00000439009 TMEM106CQ9BVX2 250 aa10.06□□□□□ -0.8
LINC00578-201ENST00000439009 VEZTQ9HBM0 779 aa10.06□□□□□ -0.8
LINC00578-201ENST00000439009 ZCCHC17Q9NP64 241 aaKnown RBP10.06□□□□□ -0.8
LINC00578-201ENST00000439009 CENPFP49454 3210 aa10.05□□□□□ -0.8
LINC00578-201ENST00000439009 MAP3K9P80192 1104 aa10.05□□□□□ -0.8
LINC00578-201ENST00000439009 UBE4AQ14139 1066 aa10.05□□□□□ -0.8
LINC00578-201ENST00000439009 BEND3Q5T5X7 828 aa10.05□□□□□ -0.8
LINC00578-201ENST00000439009 NBPF11Q86T75 865 aa10.05□□□□□ -0.8
LINC00578-201ENST00000439009 DZIP1LQ8IYY4 767 aaKnown RBP10.05□□□□□ -0.8
LINC00578-201ENST00000439009 PIAS4Q8N2W9 510 aaPredicted RBP10.05□□□□□ -0.8
LINC00578-201ENST00000439009 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.05□□□□□ -0.8
LINC00578-201ENST00000439009 ELP3Q9H9T3 547 aa10.05□□□□□ -0.8
LINC00578-201ENST00000439009 ZFYVE28Q9HCC9 887 aa10.05□□□□□ -0.8
LINC00578-201ENST00000439009 LAMB1P07942 1786 aa10.05□□□□□ -0.8
LINC00578-201ENST00000439009 CEP290O15078 2479 aa10.04□□□□□ -0.8
LINC00578-201ENST00000439009 VAMP4O75379 141 aa10.04□□□□□ -0.8
LINC00578-201ENST00000439009 GNRH1P01148 92 aa10.04□□□□□ -0.8
LINC00578-201ENST00000439009 RBM5P52756 815 aaKnown RBP eCLIP10.04□□□□□ -0.8
LINC00578-201ENST00000439009 HDLBPQ00341 1268 aaKnown RBP10.04□□□□□ -0.8
LINC00578-201ENST00000439009 FKBP5Q13451 457 aaPredicted RBP10.04□□□□□ -0.8
LINC00578-201ENST00000439009 VGLL4Q14135 290 aa10.04□□□□□ -0.8
LINC00578-201ENST00000439009 EPHA10Q5JZY3 1008 aa10.04□□□□□ -0.8
LINC00578-201ENST00000439009 MFSD14BQ5SR56 506 aa10.04□□□□□ -0.8
LINC00578-201ENST00000439009 LMBR1LQ6UX01 489 aa10.04□□□□□ -0.8
LINC00578-201ENST00000439009 LDHAL6AQ6ZMR3 332 aa10.04□□□□□ -0.8
LINC00578-201ENST00000439009 FAM43AQ8N2R8 423 aa10.04□□□□□ -0.8
LINC00578-201ENST00000439009 FAM84BQ96KN1 310 aaPredicted RBP10.04□□□□□ -0.8
LINC00578-201ENST00000439009 MRIQ9BWK5 157 aa10.04□□□□□ -0.8
LINC00578-201ENST00000439009 TDRD3Q9H7E2 651 aaKnown RBP10.04□□□□□ -0.8
LINC00578-201ENST00000439009 CCL15-CCL14A0A0B4J2E2 113 aa10.03□□□□□ -0.8
LINC00578-201ENST00000439009 TLR2O60603 784 aa10.03□□□□□ -0.8
LINC00578-201ENST00000439009 HIBADHP31937 336 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms