RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 SP3Q02447 781 aa14.61□□□□□ -0.07
CSTF3-203ENST00000438862 TSPYL4Q9UJ04 414 aa14.61□□□□□ -0.07
CSTF3-203ENST00000438862 ANGEL1Q9UNK9 670 aaKnown RBP14.61□□□□□ -0.07
CSTF3-203ENST00000438862 PRKG1Q13976 671 aa14.6□□□□□ -0.07
CSTF3-203ENST00000438862 SLC4A8Q2Y0W8 1093 aa14.6□□□□□ -0.07
CSTF3-203ENST00000438862 APOBEC3FQ8IUX4 373 aaKnown RBP14.6□□□□□ -0.07
CSTF3-203ENST00000438862 BABAM1Q9NWV8 329 aa14.6□□□□□ -0.07
CSTF3-203ENST00000438862 CEP290O15078 2479 aa14.59□□□□□ -0.07
CSTF3-203ENST00000438862 IGF2BP3O00425 579 aaKnown RBP eCLIP14.59□□□□□ -0.07
CSTF3-203ENST00000438862 HSP90B1P14625 803 aaKnown RBP14.59□□□□□ -0.07
CSTF3-203ENST00000438862 NFE2L2Q16236 605 aa14.59□□□□□ -0.07
CSTF3-203ENST00000438862 MAP3K11Q16584 847 aa14.59□□□□□ -0.07
CSTF3-203ENST00000438862 SLC9C1Q4G0N8 1177 aa14.59□□□□□ -0.07
CSTF3-203ENST00000438862 ISCA1Q9BUE6 129 aa14.59□□□□□ -0.07
CSTF3-203ENST00000438862 MYO3BQ8WXR4 1341 aa14.59□□□□□ -0.07
CSTF3-203ENST00000438862 LAMB1P07942 1786 aa14.58□□□□□ -0.08
CSTF3-203ENST00000438862 IRS4O14654 1257 aaPredicted RBP14.58□□□□□ -0.08
CSTF3-203ENST00000438862 CRHR2Q13324 411 aa14.58□□□□□ -0.08
CSTF3-203ENST00000438862 SPNS2Q8IVW8 549 aa14.58□□□□□ -0.08
CSTF3-203ENST00000438862 PLBD2Q8NHP8 589 aa14.58□□□□□ -0.08
CSTF3-203ENST00000438862 RBM27Q9P2N5 1060 aaKnown RBP14.58□□□□□ -0.08
CSTF3-203ENST00000438862 PPP1R12BO60237 982 aaPredicted RBP14.57□□□□□ -0.08
CSTF3-203ENST00000438862 ATP2B4P23634 1241 aa14.57□□□□□ -0.08
CSTF3-203ENST00000438862 PPP2R1AP30153 589 aa14.57□□□□□ -0.08
CSTF3-203ENST00000438862 ANKRD13DQ6ZTN6 518 aa14.57□□□□□ -0.08
CSTF3-203ENST00000438862 ZNF428Q96B54 188 aa14.57□□□□□ -0.08
CSTF3-203ENST00000438862 WNK4Q96J92 1243 aa14.57□□□□□ -0.08
CSTF3-203ENST00000438862 COL4A1P02462 1669 aa14.57□□□□□ -0.08
CSTF3-203ENST00000438862 XDHP47989 1333 aa14.57□□□□□ -0.08
CSTF3-203ENST00000438862 POTEB3A0JP26 581 aa14.56□□□□□ -0.08
CSTF3-203ENST00000438862 TRIM28Q13263 835 aaKnown RBP14.56□□□□□ -0.08
CSTF3-203ENST00000438862 DACT2Q5SW24 774 aa14.56□□□□□ -0.08
CSTF3-203ENST00000438862 POTEBQ6S5H4 581 aa14.56□□□□□ -0.08
CSTF3-203ENST00000438862 PNNQ9H307 717 aaKnown RBP14.56□□□□□ -0.08
CSTF3-203ENST00000438862 MMRN1Q13201 1228 aa14.55□□□□□ -0.08
CSTF3-203ENST00000438862 RTL5Q5HYW3 569 aaPredicted RBP14.55□□□□□ -0.08
CSTF3-203ENST00000438862 STRIP1Q5VSL9 837 aa14.55□□□□□ -0.08
CSTF3-203ENST00000438862 DPF3Q92784 378 aa14.55□□□□□ -0.08
CSTF3-203ENST00000438862 PLEKHF1Q96S99 279 aa14.55□□□□□ -0.08
CSTF3-203ENST00000438862 SEC31BQ9NQW1 1179 aa14.55□□□□□ -0.08
CSTF3-203ENST00000438862 COL1A1P02452 1464 aaPredicted RBP14.55□□□□□ -0.08
CSTF3-203ENST00000438862 TESPA1A2RU30 521 aaPredicted RBP14.54□□□□□ -0.08
CSTF3-203ENST00000438862 ATP5J2-PTCD1G3V325 749 aa14.54□□□□□ -0.08
CSTF3-203ENST00000438862 SASH1O94885 1247 aa14.54□□□□□ -0.08
CSTF3-203ENST00000438862 CCDC152Q4G0S7 254 aa14.54□□□□□ -0.08
CSTF3-203ENST00000438862 DEFB129Q9H1M3 183 aa14.54□□□□□ -0.08
CSTF3-203ENST00000438862 PTCH2Q9Y6C5 1203 aa14.54□□□□□ -0.08
CSTF3-203ENST00000438862 A0A0C4DFX4 3053 aa14.54□□□□□ -0.08
CSTF3-203ENST00000438862 SUPT20HL1Q3ZLR7 823 aa14.53□□□□□ -0.08
CSTF3-203ENST00000438862 ZBTB38Q8NAP3 1195 aaPredicted RBP14.53□□□□□ -0.08
CSTF3-203ENST00000438862 CLMNQ96JQ2 1002 aa14.53□□□□□ -0.08
CSTF3-203ENST00000438862 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.53□□□□□ -0.08
CSTF3-203ENST00000438862 BOLA1Q9Y3E2 137 aa14.53□□□□□ -0.08
CSTF3-203ENST00000438862 PPP2R3BQ9Y5P8 575 aa14.53□□□□□ -0.08
CSTF3-203ENST00000438862 MED23Q9ULK4 1368 aa14.52□□□□□ -0.08
CSTF3-203ENST00000438862 A0A1W2PPC1 479 aa14.52□□□□□ -0.09
CSTF3-203ENST00000438862 EMP3P54852 163 aa14.52□□□□□ -0.09
CSTF3-203ENST00000438862 CAP1Q01518 475 aa14.52□□□□□ -0.09
CSTF3-203ENST00000438862 ANKRD18AQ8IVF6 992 aa14.52□□□□□ -0.09
CSTF3-203ENST00000438862 ZBED3Q96IU2 234 aaPredicted RBP14.52□□□□□ -0.09
CSTF3-203ENST00000438862 PTPN18Q99952 460 aa14.52□□□□□ -0.09
CSTF3-203ENST00000438862 MXD3Q9BW11 206 aa14.52□□□□□ -0.09
CSTF3-203ENST00000438862 PRO3102Q9H379 93 aa14.52□□□□□ -0.09
CSTF3-203ENST00000438862 FZD1Q9UP38 647 aa14.52□□□□□ -0.09
CSTF3-203ENST00000438862 MAPK8IP3Q9UPT6 1336 aa14.51□□□□□ -0.09
CSTF3-203ENST00000438862 IREB2P48200 963 aaKnown RBP14.51□□□□□ -0.09
CSTF3-203ENST00000438862 FBXW7Q969H0 707 aa14.51□□□□□ -0.09
CSTF3-203ENST00000438862 COA1Q9GZY4 146 aa14.51□□□□□ -0.09
CSTF3-203ENST00000438862 CHPF2Q9P2E5 772 aa14.51□□□□□ -0.09
CSTF3-203ENST00000438862 NR2E3Q9Y5X4 410 aa14.51□□□□□ -0.09
CSTF3-203ENST00000438862 COL6A3P12111 3177 aa14.5□□□□□ -0.09
CSTF3-203ENST00000438862 WTIPA6NIX2 430 aaPredicted RBP14.5□□□□□ -0.09
CSTF3-203ENST00000438862 PDE8AO60658 829 aa14.5□□□□□ -0.09
CSTF3-203ENST00000438862 TTLL5Q6EMB2 1281 aa14.5□□□□□ -0.09
CSTF3-203ENST00000438862 ANKRD13AQ8IZ07 590 aa14.5□□□□□ -0.09
CSTF3-203ENST00000438862 NKX2-3Q8TAU0 364 aa14.5□□□□□ -0.09
CSTF3-203ENST00000438862 HTATIP2Q9BUP3 242 aa14.5□□□□□ -0.09
CSTF3-203ENST00000438862 ZFYVE28Q9HCC9 887 aa14.5□□□□□ -0.09
CSTF3-203ENST00000438862 DBF4Q9UBU7 674 aaPredicted RBP14.5□□□□□ -0.09
CSTF3-203ENST00000438862 CUL9Q8IWT3 2517 aa14.5□□□□□ -0.09
CSTF3-203ENST00000438862 RANBP2P49792 3224 aaKnown RBP14.49□□□□□ -0.09
CSTF3-203ENST00000438862 MYCP01106 439 aaPredicted RBP14.49□□□□□ -0.09
CSTF3-203ENST00000438862 GNRH1P01148 92 aa14.49□□□□□ -0.09
CSTF3-203ENST00000438862 PRMT2P55345 433 aa14.49□□□□□ -0.09
CSTF3-203ENST00000438862 KIAA0825Q8IV33 1275 aa14.49□□□□□ -0.09
CSTF3-203ENST00000438862 HYPKQ9NX55 129 aa14.49□□□□□ -0.09
CSTF3-203ENST00000438862 ZNF646O15015 1829 aaPredicted RBP14.48□□□□□ -0.09
CSTF3-203ENST00000438862 USP2O75604 605 aaPredicted RBP14.48□□□□□ -0.09
CSTF3-203ENST00000438862 WDHD1O75717 1129 aaPredicted RBP14.48□□□□□ -0.09
CSTF3-203ENST00000438862 HOXB3P14651 431 aaPredicted RBP14.48□□□□□ -0.09
CSTF3-203ENST00000438862 GJA5P36382 358 aa14.48□□□□□ -0.09
CSTF3-203ENST00000438862 RIPK4P57078 832 aa14.48□□□□□ -0.09
CSTF3-203ENST00000438862 KIF22Q14807 665 aa14.48□□□□□ -0.09
CSTF3-203ENST00000438862 DLGAP5Q15398 846 aa14.48□□□□□ -0.09
CSTF3-203ENST00000438862 MTMR14Q8NCE2 650 aa14.48□□□□□ -0.09
CSTF3-203ENST00000438862 SH3TC2Q8TF17 1288 aa14.48□□□□□ -0.09
CSTF3-203ENST00000438862 HS3ST6Q96QI5 342 aa14.48□□□□□ -0.09
CSTF3-203ENST00000438862 CDC5LQ99459 802 aaKnown RBP14.48□□□□□ -0.09
CSTF3-203ENST00000438862 MYO1BO43795 1136 aa14.47□□□□□ -0.09
CSTF3-203ENST00000438862 PCCAP05165 728 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms