RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 C3orf67Q6ZVT6 689 aa16.46■□□□□ 0.22
PTCHD3-201ENST00000438700 SETDB2Q96T68 719 aa16.46■□□□□ 0.22
PTCHD3-201ENST00000438700 COL4A1P02462 1669 aa16.45■□□□□ 0.22
PTCHD3-201ENST00000438700 ABCC12Q96J65 1359 aa16.45■□□□□ 0.22
PTCHD3-201ENST00000438700 GTF2E1P29083 439 aaPredicted RBP16.45■□□□□ 0.22
PTCHD3-201ENST00000438700 FKBP4Q02790 459 aaKnown RBP eCLIP16.45■□□□□ 0.22
PTCHD3-201ENST00000438700 TOB2Q14106 344 aaPredicted RBP16.45■□□□□ 0.22
PTCHD3-201ENST00000438700 HMG20BQ9P0W2 317 aa16.45■□□□□ 0.22
PTCHD3-201ENST00000438700 DNM1Q05193 864 aaKnown RBP16.45■□□□□ 0.22
PTCHD3-201ENST00000438700 SCARF1Q14162 830 aa16.45■□□□□ 0.22
PTCHD3-201ENST00000438700 MCMDC2Q4G0Z9 681 aa16.45■□□□□ 0.22
PTCHD3-201ENST00000438700 SYAP1Q96A49 352 aaPredicted RBP16.45■□□□□ 0.22
PTCHD3-201ENST00000438700 RFC4P35249 363 aa16.44■□□□□ 0.22
PTCHD3-201ENST00000438700 IGHMBP2P38935 993 aaKnown RBP16.44■□□□□ 0.22
PTCHD3-201ENST00000438700 TRAPPC3LQ5T215 181 aa16.44■□□□□ 0.22
PTCHD3-201ENST00000438700 ZNF772Q68DY9 489 aaPredicted RBP16.44■□□□□ 0.22
PTCHD3-201ENST00000438700 TAF1P21675 1872 aa16.44■□□□□ 0.22
PTCHD3-201ENST00000438700 ARAP2Q8WZ64 1704 aa16.44■□□□□ 0.22
PTCHD3-201ENST00000438700 RBM6P78332 1123 aaKnown RBP16.44■□□□□ 0.22
PTCHD3-201ENST00000438700 PUM3Q15397 648 aaKnown RBP16.44■□□□□ 0.22
PTCHD3-201ENST00000438700 HS1BP3Q53T59 392 aa16.44■□□□□ 0.22
PTCHD3-201ENST00000438700 TMEM87AQ8NBN3 555 aa16.44■□□□□ 0.22
PTCHD3-201ENST00000438700 ATP6V1DQ9Y5K8 247 aa16.44■□□□□ 0.22
PTCHD3-201ENST00000438700 UBR3Q6ZT12 1888 aa16.43■□□□□ 0.22
PTCHD3-201ENST00000438700 CYP21A2P08686 494 aa16.43■□□□□ 0.22
PTCHD3-201ENST00000438700 LARP1BQ659C4 914 aaKnown RBP16.43■□□□□ 0.22
PTCHD3-201ENST00000438700 FERMT3Q86UX7 667 aa16.43■□□□□ 0.22
PTCHD3-201ENST00000438700 NBPF5PQ86XG9 351 aaPredicted RBP16.43■□□□□ 0.22
PTCHD3-201ENST00000438700 NYXQ9GZU5 481 aa16.43■□□□□ 0.22
PTCHD3-201ENST00000438700 AKAP11Q9UKA4 1901 aa16.43■□□□□ 0.22
PTCHD3-201ENST00000438700 ANKRD1Q15327 319 aa16.43■□□□□ 0.22
PTCHD3-201ENST00000438700 PI16Q6UXB8 463 aa16.43■□□□□ 0.22
PTCHD3-201ENST00000438700 CDC37L1Q7L3B6 337 aa16.43■□□□□ 0.22
PTCHD3-201ENST00000438700 FGFR2P21802 821 aa16.42■□□□□ 0.22
PTCHD3-201ENST00000438700 LPIN2Q92539 896 aa16.42■□□□□ 0.22
PTCHD3-201ENST00000438700 NEK1Q96PY6 1258 aa16.42■□□□□ 0.22
PTCHD3-201ENST00000438700 LRRC2Q9BYS8 371 aa16.42■□□□□ 0.22
PTCHD3-201ENST00000438700 ZAP70P43403 619 aa16.42■□□□□ 0.22
PTCHD3-201ENST00000438700 SF3B3Q15393 1217 aaKnown RBP16.42■□□□□ 0.22
PTCHD3-201ENST00000438700 TSGA10IPQ3SY00 556 aa16.42■□□□□ 0.22
PTCHD3-201ENST00000438700 CDC5LQ99459 802 aaKnown RBP16.42■□□□□ 0.22
PTCHD3-201ENST00000438700 TSPY26PQ9H489 355 aa16.42■□□□□ 0.22
PTCHD3-201ENST00000438700 SNAP23O00161 211 aa16.41■□□□□ 0.22
PTCHD3-201ENST00000438700 MCAMP43121 646 aa16.41■□□□□ 0.22
PTCHD3-201ENST00000438700 TERF1P54274 439 aa16.41■□□□□ 0.22
PTCHD3-201ENST00000438700 SLC27A3Q5K4L6 730 aa16.41■□□□□ 0.22
PTCHD3-201ENST00000438700 SLC10A5Q5PT55 438 aa16.41■□□□□ 0.22
PTCHD3-201ENST00000438700 CCDC24Q8N4L8 307 aa16.41■□□□□ 0.22
PTCHD3-201ENST00000438700 U3KPZ7 1027 aaPredicted RBP16.41■□□□□ 0.22
PTCHD3-201ENST00000438700 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.41■□□□□ 0.22
PTCHD3-201ENST00000438700 PHKA1P46020 1223 aa16.41■□□□□ 0.22
PTCHD3-201ENST00000438700 UBE2HP62256 183 aa16.41■□□□□ 0.22
PTCHD3-201ENST00000438700 KRT32Q14532 448 aa16.41■□□□□ 0.22
PTCHD3-201ENST00000438700 FAM173BQ6P4H8 233 aa16.41■□□□□ 0.22
PTCHD3-201ENST00000438700 TSC1Q92574 1164 aa16.41■□□□□ 0.22
PTCHD3-201ENST00000438700 SLC5A1P13866 664 aa16.4■□□□□ 0.22
PTCHD3-201ENST00000438700 CCDC102BQ68D86 513 aa16.4■□□□□ 0.22
PTCHD3-201ENST00000438700 ZNF830Q96NB3 372 aaPredicted RBP16.4■□□□□ 0.22
PTCHD3-201ENST00000438700 MYH7P12883 1935 aa16.4■□□□□ 0.22
PTCHD3-201ENST00000438700 RNF113AO15541 343 aaKnown RBP16.4■□□□□ 0.22
PTCHD3-201ENST00000438700 ZMYM1Q5SVZ6 1142 aa16.4■□□□□ 0.22
PTCHD3-201ENST00000438700 TPTE2Q6XPS3 522 aa16.4■□□□□ 0.22
PTCHD3-201ENST00000438700 Q6ZUG5 572 aa16.4■□□□□ 0.22
PTCHD3-201ENST00000438700 TICAM2Q86XR7 235 aa16.4■□□□□ 0.22
PTCHD3-201ENST00000438700 ANKRD18AQ8IVF6 992 aa16.4■□□□□ 0.22
PTCHD3-201ENST00000438700 PRDM4Q9UKN5 801 aa16.4■□□□□ 0.22
PTCHD3-201ENST00000438700 A0A1B0GUL6 1792 aa16.39■□□□□ 0.21
PTCHD3-201ENST00000438700 A0A0G2JLW4 131 aa16.39■□□□□ 0.21
PTCHD3-201ENST00000438700 ADRA2BP18089 450 aa16.39■□□□□ 0.21
PTCHD3-201ENST00000438700 CHRNDQ07001 517 aa16.39■□□□□ 0.21
PTCHD3-201ENST00000438700 STOX1Q6ZVD7 989 aa16.39■□□□□ 0.21
PTCHD3-201ENST00000438700 ZNF512BQ96KM6 892 aaPredicted RBP16.39■□□□□ 0.21
PTCHD3-201ENST00000438700 HELLSQ9NRZ9 838 aa16.39■□□□□ 0.21
PTCHD3-201ENST00000438700 JAK2O60674 1132 aa16.38■□□□□ 0.21
PTCHD3-201ENST00000438700 FGD1P98174 961 aa16.38■□□□□ 0.21
PTCHD3-201ENST00000438700 NFIXQ14938 502 aa16.38■□□□□ 0.21
PTCHD3-201ENST00000438700 CCDC183Q5T5S1 534 aa16.38■□□□□ 0.21
PTCHD3-201ENST00000438700 NLRP3Q96P20 1036 aa16.38■□□□□ 0.21
PTCHD3-201ENST00000438700 NPHP1O15259 732 aa16.38■□□□□ 0.21
PTCHD3-201ENST00000438700 ARID4AP29374 1257 aaPredicted RBP16.38■□□□□ 0.21
PTCHD3-201ENST00000438700 BRF1Q92994 677 aa16.38■□□□□ 0.21
PTCHD3-201ENST00000438700 ALDH8A1Q9H2A2 487 aaPredicted RBP16.38■□□□□ 0.21
PTCHD3-201ENST00000438700 PRDM10Q9NQV6 1147 aa16.38■□□□□ 0.21
PTCHD3-201ENST00000438700 MYO5AQ9Y4I1 1855 aaKnown RBP16.38■□□□□ 0.21
PTCHD3-201ENST00000438700 MAST3O60307 1309 aa16.37■□□□□ 0.21
PTCHD3-201ENST00000438700 TNRC6CQ9HCJ0 1690 aaKnown RBP16.37■□□□□ 0.21
PTCHD3-201ENST00000438700 CARMIL3Q8ND23 1372 aa16.37■□□□□ 0.21
PTCHD3-201ENST00000438700 TXNRD1Q16881 649 aa16.37■□□□□ 0.21
PTCHD3-201ENST00000438700 CELF1Q92879 486 aaKnown RBP16.37■□□□□ 0.21
PTCHD3-201ENST00000438700 UQCRFS1P1P0C7P4 283 aa16.37■□□□□ 0.21
PTCHD3-201ENST00000438700 PDCP20941 246 aa16.37■□□□□ 0.21
PTCHD3-201ENST00000438700 LRRFIP1Q32MZ4 808 aaKnown RBP16.37■□□□□ 0.21
PTCHD3-201ENST00000438700 PROM2Q8N271 834 aa16.37■□□□□ 0.21
PTCHD3-201ENST00000438700 GTF3C6Q969F1 213 aa16.37■□□□□ 0.21
PTCHD3-201ENST00000438700 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.37■□□□□ 0.21
PTCHD3-201ENST00000438700 M0R2C6 588 aa16.36■□□□□ 0.21
PTCHD3-201ENST00000438700 PTMAP06454 111 aaKnown RBP16.36■□□□□ 0.21
PTCHD3-201ENST00000438700 C17orf53Q8N3J3 647 aaPredicted RBP16.36■□□□□ 0.21
PTCHD3-201ENST00000438700 BSDC1Q9NW68 430 aaPredicted RBP16.36■□□□□ 0.21
PTCHD3-201ENST00000438700 CCDC39Q9UFE4 941 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms