RNA–Protein interactions for RNA: ENST00000438581.6

TMEM39A-202, Transcript of transmembrane protein 39A, humanhuman

TSL 1 (best)

Gene TMEM39A, Length 4,393 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-202ENST00000438581 RINLQ6ZS11 566 aa9.4□□□□□ -0.9
TMEM39A-202ENST00000438581 FAM196AQ6ZSG2 479 aa9.4□□□□□ -0.9
TMEM39A-202ENST00000438581 SEC62Q99442 399 aaKnown RBP9.4□□□□□ -0.9
TMEM39A-202ENST00000438581 GPAA1O43292 621 aa9.4□□□□□ -0.91
TMEM39A-202ENST00000438581 IL6STP40189 918 aaPredicted RBP9.4□□□□□ -0.91
TMEM39A-202ENST00000438581 GSTO1P78417 241 aa9.4□□□□□ -0.91
TMEM39A-202ENST00000438581 TLR7Q9NYK1 1049 aaKnown RBP9.4□□□□□ -0.91
TMEM39A-202ENST00000438581 RBM27Q9P2N5 1060 aaKnown RBP9.4□□□□□ -0.91
TMEM39A-202ENST00000438581 LRRC7Q96NW7 1537 aa9.4□□□□□ -0.91
TMEM39A-202ENST00000438581 ZRSR2Q15696 482 aaKnown RBP9.39□□□□□ -0.91
TMEM39A-202ENST00000438581 FAM43BQ6ZT52 329 aaPredicted RBP9.39□□□□□ -0.91
TMEM39A-202ENST00000438581 DHX32Q7L7V1 743 aaKnown RBP9.39□□□□□ -0.91
TMEM39A-202ENST00000438581 KRT23Q9C075 422 aa9.39□□□□□ -0.91
TMEM39A-202ENST00000438581 STK32BQ9NY57 414 aa9.39□□□□□ -0.91
TMEM39A-202ENST00000438581 IBTKQ9P2D0 1353 aaPredicted RBP9.39□□□□□ -0.91
TMEM39A-202ENST00000438581 PRDM1O75626 825 aa9.39□□□□□ -0.91
TMEM39A-202ENST00000438581 TSPY3P0CV98 308 aa9.39□□□□□ -0.91
TMEM39A-202ENST00000438581 TSPY8P0CW00 308 aa9.39□□□□□ -0.91
TMEM39A-202ENST00000438581 ATP5JP18859 108 aa9.39□□□□□ -0.91
TMEM39A-202ENST00000438581 MAP3K11Q16584 847 aa9.39□□□□□ -0.91
TMEM39A-202ENST00000438581 NRXN1Q9ULB1 1477 aa9.39□□□□□ -0.91
TMEM39A-202ENST00000438581 MYO3AQ8NEV4 1616 aa9.39□□□□□ -0.91
TMEM39A-202ENST00000438581 HLA-DOAP06340 250 aa9.39□□□□□ -0.91
TMEM39A-202ENST00000438581 ZSCAN22P10073 491 aaPredicted RBP9.39□□□□□ -0.91
TMEM39A-202ENST00000438581 ZNF76P36508 570 aa9.39□□□□□ -0.91
TMEM39A-202ENST00000438581 IFIT1BQ5T764 474 aaKnown RBP9.39□□□□□ -0.91
TMEM39A-202ENST00000438581 RUFY3Q7L099 469 aa9.39□□□□□ -0.91
TMEM39A-202ENST00000438581 APPBP2Q92624 585 aa9.39□□□□□ -0.91
TMEM39A-202ENST00000438581 FAM210AQ96ND0 272 aa9.39□□□□□ -0.91
TMEM39A-202ENST00000438581 COPRSQ9NQ92 184 aa9.39□□□□□ -0.91
TMEM39A-202ENST00000438581 SNX14Q9Y5W7 946 aa9.39□□□□□ -0.91
TMEM39A-202ENST00000438581 SLC27A2O14975 620 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 IPO7O95373 1038 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 GYG1P46976 350 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 RBM26Q5T8P6 1007 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 NBPF14Q5TI25 921 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 SEPT12Q8IYM1 358 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 RBM17Q96I25 401 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 NUB1Q9Y5A7 615 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 ZC3H13Q5T200 1668 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 RAD50Q92878 1312 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 DLC1Q96QB1 1528 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 VWDEQ8N2E2 1590 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 B4E1Z4 1266 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 SATB1Q01826 763 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 PPP4R3BQ5MIZ7 849 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 OGFOD1Q8N543 542 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 ALG1Q9BT22 464 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 HELLSQ9NRZ9 838 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 ATG3Q9NT62 314 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 DBNLQ9UJU6 430 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 DENND2AQ9ULE3 1009 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 RIMS1Q86UR5 1692 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 MED14O60244 1454 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 A0A0D9SFI3 127 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 CCDC194A0A1B0GVG4 234 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 DCAF8L1A6NGE4 600 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 IGKV5-2P06315 115 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 LIG1P18858 919 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 RTN1Q16799 776 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 FEZ1Q99689 392 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 CNNM2Q9H8M5 875 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 SEC31BQ9NQW1 1179 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 CNPY2Q9Y2B0 182 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 AOX1Q06278 1338 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 KCNQ2O43526 872 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 SERPINC1P01008 464 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 ADORA1P30542 326 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 BCAMP50895 628 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 HLFQ16534 295 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 TMTC2Q8N394 836 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 FSIP1Q8NA03 581 aa9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 SUDS3Q9H7L9 328 aaPredicted RBP9.38□□□□□ -0.91
TMEM39A-202ENST00000438581 MROH2AA6NES4 1674 aa9.37□□□□□ -0.91
TMEM39A-202ENST00000438581 SPATA31D1Q6ZQQ2 1576 aa9.37□□□□□ -0.91
TMEM39A-202ENST00000438581 ARID4AP29374 1257 aaPredicted RBP9.37□□□□□ -0.91
TMEM39A-202ENST00000438581 KIF5BP33176 963 aa9.37□□□□□ -0.91
TMEM39A-202ENST00000438581 CLCN1P35523 988 aa9.37□□□□□ -0.91
TMEM39A-202ENST00000438581 DNM1Q05193 864 aaKnown RBP9.37□□□□□ -0.91
TMEM39A-202ENST00000438581 SYNE4Q8N205 404 aa9.37□□□□□ -0.91
TMEM39A-202ENST00000438581 SPATA5Q8NB90 893 aa9.37□□□□□ -0.91
TMEM39A-202ENST00000438581 GGA1Q9UJY5 639 aa9.37□□□□□ -0.91
TMEM39A-202ENST00000438581 ZNF532Q9HCE3 1301 aa9.37□□□□□ -0.91
TMEM39A-202ENST00000438581 OVOS2A0A0J9YW53 1432 aa9.37□□□□□ -0.91
TMEM39A-202ENST00000438581 OVOS2Q6IE36 1432 aa9.37□□□□□ -0.91
TMEM39A-202ENST00000438581 PTH1RQ03431 593 aa9.37□□□□□ -0.91
TMEM39A-202ENST00000438581 EPHA10Q5JZY3 1008 aa9.37□□□□□ -0.91
TMEM39A-202ENST00000438581 NLRP10Q86W26 655 aa9.37□□□□□ -0.91
TMEM39A-202ENST00000438581 SRP68Q9UHB9 627 aaKnown RBP9.37□□□□□ -0.91
TMEM39A-202ENST00000438581 VEZTQ9HBM0 779 aa9.37□□□□□ -0.91
TMEM39A-202ENST00000438581 AATFQ9NY61 560 aaKnown RBP eCLIP9.37□□□□□ -0.91
TMEM39A-202ENST00000438581 SAP30BPQ9UHR5 308 aaKnown RBP9.37□□□□□ -0.91
TMEM39A-202ENST00000438581 PALD1Q9ULE6 856 aa9.37□□□□□ -0.91
TMEM39A-202ENST00000438581 TMEM131LA2VDJ0 1609 aa9.37□□□□□ -0.91
TMEM39A-202ENST00000438581 GNAT2P19087 354 aa9.36□□□□□ -0.91
TMEM39A-202ENST00000438581 MROH5Q6ZUA9 1318 aa9.36□□□□□ -0.91
TMEM39A-202ENST00000438581 CEP57L1Q8IYX8 460 aa9.36□□□□□ -0.91
TMEM39A-202ENST00000438581 EFCC1Q9HA90 598 aa9.36□□□□□ -0.91
TMEM39A-202ENST00000438581 NCOA5Q9HCD5 579 aaKnown RBP9.36□□□□□ -0.91
TMEM39A-202ENST00000438581 CABP5Q9NP86 173 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 288.6 ms