RNA–Protein interactions for RNA: ENST00000438191.1

RPE-209, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-209ENST00000438191 COL4A1P02462 1669 aa12.34□□□□□ -0.43
RPE-209ENST00000438191 USP17L3A6NCW0 530 aa12.33□□□□□ -0.44
RPE-209ENST00000438191 USP17L4A6NCW7 530 aa12.33□□□□□ -0.44
RPE-209ENST00000438191 WDHD1O75717 1129 aaPredicted RBP12.33□□□□□ -0.44
RPE-209ENST00000438191 FMNL1O95466 1100 aaPredicted RBP12.33□□□□□ -0.44
RPE-209ENST00000438191 C17orf99Q6UX52 265 aa12.33□□□□□ -0.44
RPE-209ENST00000438191 USP17L1Q7RTZ2 530 aa12.33□□□□□ -0.44
RPE-209ENST00000438191 ANKLE1Q8NAG6 615 aa12.33□□□□□ -0.44
RPE-209ENST00000438191 CELF1Q92879 486 aaKnown RBP12.33□□□□□ -0.44
RPE-209ENST00000438191 DEFB129Q9H1M3 183 aa12.33□□□□□ -0.44
RPE-209ENST00000438191 ELP3Q9H9T3 547 aa12.33□□□□□ -0.44
RPE-209ENST00000438191 DDX60LQ5H9U9 1706 aaKnown RBP12.33□□□□□ -0.44
RPE-209ENST00000438191 ADGRA2Q96PE1 1338 aa12.33□□□□□ -0.44
RPE-209ENST00000438191 IREB2P48200 963 aaKnown RBP12.32□□□□□ -0.44
RPE-209ENST00000438191 GTF2A2P52657 109 aa12.32□□□□□ -0.44
RPE-209ENST00000438191 PRKCZQ05513 592 aa12.32□□□□□ -0.44
RPE-209ENST00000438191 OGFOD1Q8N543 542 aa12.32□□□□□ -0.44
RPE-209ENST00000438191 MGAMO43451 1857 aa12.31□□□□□ -0.44
RPE-209ENST00000438191 INHAP05111 366 aa12.31□□□□□ -0.44
RPE-209ENST00000438191 ZBED3Q96IU2 234 aaPredicted RBP12.31□□□□□ -0.44
RPE-209ENST00000438191 NBPF3Q9H094 633 aa12.31□□□□□ -0.44
RPE-209ENST00000438191 ZCCHC17Q9NP64 241 aaKnown RBP12.31□□□□□ -0.44
RPE-209ENST00000438191 TMEM31Q5JXX7 168 aa12.3□□□□□ -0.44
RPE-209ENST00000438191 MXD3Q9BW11 206 aa12.3□□□□□ -0.44
RPE-209ENST00000438191 EPHX3Q9H6B9 360 aa12.3□□□□□ -0.44
RPE-209ENST00000438191 PODXL2Q9NZ53 605 aa12.3□□□□□ -0.44
RPE-209ENST00000438191 THEGQ9P2T0 379 aa12.3□□□□□ -0.44
RPE-209ENST00000438191 CPA4Q9UI42 421 aa12.3□□□□□ -0.44
RPE-209ENST00000438191 GABRQQ9UN88 632 aa12.3□□□□□ -0.44
RPE-209ENST00000438191 ADCY3O60266 1144 aa12.29□□□□□ -0.44
RPE-209ENST00000438191 MRPS5P82675 430 aaKnown RBP12.29□□□□□ -0.44
RPE-209ENST00000438191 SUPT20HL1Q3ZLR7 823 aa12.29□□□□□ -0.44
RPE-209ENST00000438191 NBPF12Q5TAG4 269 aaPredicted RBP12.29□□□□□ -0.44
RPE-209ENST00000438191 NECAB3Q96P71 396 aaPredicted RBP12.29□□□□□ -0.44
RPE-209ENST00000438191 C11orf49Q9H6J7 331 aa12.29□□□□□ -0.44
RPE-209ENST00000438191 PPP2R3BQ9Y5P8 575 aa12.29□□□□□ -0.44
RPE-209ENST00000438191 COL3A1P02461 1466 aaPredicted RBP12.28□□□□□ -0.44
RPE-209ENST00000438191 ECM29Q5VYK3 1845 aa12.28□□□□□ -0.44
RPE-209ENST00000438191 BTBD19C9JJ37 291 aa12.28□□□□□ -0.44
RPE-209ENST00000438191 UFL1O94874 794 aa12.28□□□□□ -0.44
RPE-209ENST00000438191 ELNP15502 786 aa12.28□□□□□ -0.44
RPE-209ENST00000438191 DACT2Q5SW24 774 aa12.28□□□□□ -0.44
RPE-209ENST00000438191 PODNQ7Z5L7 613 aa12.28□□□□□ -0.44
RPE-209ENST00000438191 TCF20Q9UGU0 1960 aaKnown RBP12.28□□□□□ -0.44
RPE-209ENST00000438191 SMAD3P84022 425 aaKnown RBP12.27□□□□□ -0.45
RPE-209ENST00000438191 GAS2L2Q8NHY3 880 aa12.27□□□□□ -0.45
RPE-209ENST00000438191 RRP7AQ9Y3A4 280 aaKnown RBP12.27□□□□□ -0.45
RPE-209ENST00000438191 MMP14P50281 582 aa12.26□□□□□ -0.45
RPE-209ENST00000438191 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.26□□□□□ -0.45
RPE-209ENST00000438191 PXYLP1Q8TE99 480 aa12.26□□□□□ -0.45
RPE-209ENST00000438191 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.26□□□□□ -0.45
RPE-209ENST00000438191 C11orf16Q9NQ32 467 aa12.26□□□□□ -0.45
RPE-209ENST00000438191 GGA1Q9UJY5 639 aa12.26□□□□□ -0.45
RPE-209ENST00000438191 ZNF804BA4D1E1 1349 aa12.26□□□□□ -0.45
RPE-209ENST00000438191 PFASO15067 1338 aa12.26□□□□□ -0.45
RPE-209ENST00000438191 MYO3BQ8WXR4 1341 aa12.26□□□□□ -0.45
RPE-209ENST00000438191 GPR37L1O60883 481 aa12.25□□□□□ -0.45
RPE-209ENST00000438191 MYL6BP14649 208 aa12.25□□□□□ -0.45
RPE-209ENST00000438191 FOXK2Q01167 660 aa12.25□□□□□ -0.45
RPE-209ENST00000438191 CETPP11597 493 aa12.24□□□□□ -0.45
RPE-209ENST00000438191 FLT3LGP49771 235 aa12.24□□□□□ -0.45
RPE-209ENST00000438191 GRIN2CQ14957 1233 aa12.24□□□□□ -0.45
RPE-209ENST00000438191 SHHQ15465 462 aa12.24□□□□□ -0.45
RPE-209ENST00000438191 NLRP10Q86W26 655 aa12.24□□□□□ -0.45
RPE-209ENST00000438191 IL27Q8NEV9 243 aa12.24□□□□□ -0.45
RPE-209ENST00000438191 SH3TC1Q8TE82 1336 aa12.24□□□□□ -0.45
RPE-209ENST00000438191 LBHD1Q9BQE6 289 aaPredicted RBP12.24□□□□□ -0.45
RPE-209ENST00000438191 FCGRTP55899 365 aa12.23□□□□□ -0.45
RPE-209ENST00000438191 SF3B3Q15393 1217 aaKnown RBP12.23□□□□□ -0.45
RPE-209ENST00000438191 MORC1Q86VD1 984 aa12.23□□□□□ -0.45
RPE-209ENST00000438191 PPM1EQ8WY54 764 aa12.23□□□□□ -0.45
RPE-209ENST00000438191 ANKIB1Q9P2G1 1089 aa12.23□□□□□ -0.45
RPE-209ENST00000438191 TRMT112Q9UI30 125 aaKnown RBP12.23□□□□□ -0.45
RPE-209ENST00000438191 LTBP2Q14767 1821 aa12.23□□□□□ -0.45
RPE-209ENST00000438191 RPS8P62241 208 aaKnown RBP12.22□□□□□ -0.45
RPE-209ENST00000438191 NHLH1Q02575 133 aa12.22□□□□□ -0.45
RPE-209ENST00000438191 IRF5Q13568 498 aa12.22□□□□□ -0.45
RPE-209ENST00000438191 VGLL4Q14135 290 aa12.22□□□□□ -0.45
RPE-209ENST00000438191 LRRC26Q2I0M4 334 aa12.22□□□□□ -0.45
RPE-209ENST00000438191 C9orf50Q5SZB4 431 aa12.22□□□□□ -0.45
RPE-209ENST00000438191 STRIP1Q5VSL9 837 aa12.22□□□□□ -0.45
RPE-209ENST00000438191 MTMR14Q8NCE2 650 aa12.22□□□□□ -0.45
RPE-209ENST00000438191 SPDYE5A6NIY4 337 aa12.21□□□□□ -0.45
RPE-209ENST00000438191 BMP1P13497 986 aa12.21□□□□□ -0.45
RPE-209ENST00000438191 POTEEQ6S8J3 1075 aa12.21□□□□□ -0.45
RPE-209ENST00000438191 KIAA0825Q8IV33 1275 aa12.21□□□□□ -0.45
RPE-209ENST00000438191 FAM86C2PA6NEL3 165 aa12.2□□□□□ -0.46
RPE-209ENST00000438191 BCRP11274 1271 aa12.2□□□□□ -0.46
RPE-209ENST00000438191 COL6A1P12109 1028 aa12.2□□□□□ -0.46
RPE-209ENST00000438191 MAP3K9P80192 1104 aa12.2□□□□□ -0.46
RPE-209ENST00000438191 DLGAP5Q15398 846 aa12.2□□□□□ -0.46
RPE-209ENST00000438191 FBXW7Q969H0 707 aa12.2□□□□□ -0.46
RPE-209ENST00000438191 OGDHLQ9ULD0 1010 aa12.2□□□□□ -0.46
RPE-209ENST00000438191 MAST2Q6P0Q8 1798 aa12.2□□□□□ -0.46
RPE-209ENST00000438191 CLRN2A0PK11 232 aa12.19□□□□□ -0.46
RPE-209ENST00000438191 SNAPC2Q13487 334 aa12.19□□□□□ -0.46
RPE-209ENST00000438191 RASA3Q14644 834 aa12.19□□□□□ -0.46
RPE-209ENST00000438191 AKNAD1Q5T1N1 836 aa12.19□□□□□ -0.46
RPE-209ENST00000438191 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.19□□□□□ -0.46
RPE-209ENST00000438191 PCDHAC2Q9Y5I4 1007 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms