RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 HELBQ8NG08 1087 aaPredicted RBP18.99■□□□□ 0.63
HDAC8-213ENST00000436675 STK31Q9BXU1 1019 aa18.99■□□□□ 0.63
HDAC8-213ENST00000436675 VEZTQ9HBM0 779 aa18.99■□□□□ 0.63
HDAC8-213ENST00000436675 COL1A1P02452 1464 aaPredicted RBP18.98■□□□□ 0.63
HDAC8-213ENST00000436675 ZBTB48P10074 688 aaPredicted RBP18.98■□□□□ 0.63
HDAC8-213ENST00000436675 CFAP100Q494V2 611 aa18.98■□□□□ 0.63
HDAC8-213ENST00000436675 NBPF12Q5TAG4 269 aaPredicted RBP18.98■□□□□ 0.63
HDAC8-213ENST00000436675 INTS3Q68E01 1043 aaKnown RBP18.98■□□□□ 0.63
HDAC8-213ENST00000436675 CHMP4AQ9BY43 222 aa18.98■□□□□ 0.63
HDAC8-213ENST00000436675 AOX1Q06278 1338 aa18.98■□□□□ 0.63
HDAC8-213ENST00000436675 EN2P19622 333 aaPredicted RBP18.97■□□□□ 0.63
HDAC8-213ENST00000436675 GJA5P36382 358 aa18.97■□□□□ 0.63
HDAC8-213ENST00000436675 CRHR2Q13324 411 aa18.97■□□□□ 0.63
HDAC8-213ENST00000436675 MAP3K11Q16584 847 aa18.97■□□□□ 0.63
HDAC8-213ENST00000436675 ERO1AQ96HE7 468 aa18.97■□□□□ 0.63
HDAC8-213ENST00000436675 PTPN22Q9Y2R2 807 aa18.97■□□□□ 0.63
HDAC8-213ENST00000436675 CEP290O15078 2479 aa18.97■□□□□ 0.63
HDAC8-213ENST00000436675 RBM5P52756 815 aaKnown RBP eCLIP18.96■□□□□ 0.63
HDAC8-213ENST00000436675 GCKRQ14397 625 aa18.96■□□□□ 0.63
HDAC8-213ENST00000436675 SUPT20HL1Q3ZLR7 823 aa18.96■□□□□ 0.63
HDAC8-213ENST00000436675 PRMT6Q96LA8 375 aaPredicted RBP18.96■□□□□ 0.63
HDAC8-213ENST00000436675 EFCC1Q9HA90 598 aa18.96■□□□□ 0.63
HDAC8-213ENST00000436675 LAMB1P07942 1786 aa18.96■□□□□ 0.63
HDAC8-213ENST00000436675 RBBP6Q7Z6E9 1792 aaKnown RBP18.96■□□□□ 0.63
HDAC8-213ENST00000436675 MYO1BO43795 1136 aa18.95■□□□□ 0.62
HDAC8-213ENST00000436675 USP2O75604 605 aaPredicted RBP18.95■□□□□ 0.62
HDAC8-213ENST00000436675 SLC4A2P04920 1241 aa18.95■□□□□ 0.62
HDAC8-213ENST00000436675 CAP1Q01518 475 aa18.95■□□□□ 0.62
HDAC8-213ENST00000436675 MTMR14Q8NCE2 650 aa18.95■□□□□ 0.62
HDAC8-213ENST00000436675 PLA2G12BQ9BX93 195 aa18.95■□□□□ 0.62
HDAC8-213ENST00000436675 A0A1B0GUL6 1792 aa18.95■□□□□ 0.62
HDAC8-213ENST00000436675 OTOFQ9HC10 1997 aa18.94■□□□□ 0.62
HDAC8-213ENST00000436675 ANKRD18BA2A2Z9 1011 aa18.94■□□□□ 0.62
HDAC8-213ENST00000436675 SPDYE2BA6NHP3 402 aa18.94■□□□□ 0.62
HDAC8-213ENST00000436675 CSF1RP07333 972 aa18.94■□□□□ 0.62
HDAC8-213ENST00000436675 SPDYE6P0CI01 402 aa18.94■□□□□ 0.62
HDAC8-213ENST00000436675 IREB2P48200 963 aaKnown RBP18.94■□□□□ 0.62
HDAC8-213ENST00000436675 CASP7P55210 303 aa18.94■□□□□ 0.62
HDAC8-213ENST00000436675 OTUD7BQ6GQQ9 843 aa18.94■□□□□ 0.62
HDAC8-213ENST00000436675 PTPN18Q99952 460 aa18.94■□□□□ 0.62
HDAC8-213ENST00000436675 ELP3Q9H9T3 547 aa18.94■□□□□ 0.62
HDAC8-213ENST00000436675 CHMP3Q9Y3E7 222 aa18.94■□□□□ 0.62
HDAC8-213ENST00000436675 PPP2R3BQ9Y5P8 575 aa18.94■□□□□ 0.62
HDAC8-213ENST00000436675 SP3Q02447 781 aa18.93■□□□□ 0.62
HDAC8-213ENST00000436675 RASA3Q14644 834 aa18.93■□□□□ 0.62
HDAC8-213ENST00000436675 TWISTNBQ3B726 338 aaPredicted RBP18.93■□□□□ 0.62
HDAC8-213ENST00000436675 IRS2Q9Y4H2 1338 aa18.93■□□□□ 0.62
HDAC8-213ENST00000436675 PLIN1O60240 522 aa18.92■□□□□ 0.62
HDAC8-213ENST00000436675 ZNF804AQ7Z570 1209 aa18.92■□□□□ 0.62
HDAC8-213ENST00000436675 MYH16Q9H6N6 1097 aa18.92■□□□□ 0.62
HDAC8-213ENST00000436675 BRCA2P51587 3418 aa18.92■□□□□ 0.62
HDAC8-213ENST00000436675 MYCP01106 439 aaPredicted RBP18.91■□□□□ 0.62
HDAC8-213ENST00000436675 FLIIQ13045 1269 aa18.91■□□□□ 0.62
HDAC8-213ENST00000436675 FKBP5Q13451 457 aaPredicted RBP18.91■□□□□ 0.62
HDAC8-213ENST00000436675 ANKRD13AQ8IZ07 590 aa18.91■□□□□ 0.62
HDAC8-213ENST00000436675 CNKSR2Q8WXI2 1034 aa18.91■□□□□ 0.62
HDAC8-213ENST00000436675 ARMC5Q96C12 935 aa18.91■□□□□ 0.62
HDAC8-213ENST00000436675 OPTNQ96CV9 577 aa18.91■□□□□ 0.62
HDAC8-213ENST00000436675 PRKRIP1Q9H875 184 aaPredicted RBP18.91■□□□□ 0.62
HDAC8-213ENST00000436675 IL1R1P14778 569 aa18.9■□□□□ 0.62
HDAC8-213ENST00000436675 DNAAF4Q8WXU2 420 aa18.9■□□□□ 0.62
HDAC8-213ENST00000436675 TMEM106CQ9BVX2 250 aa18.9■□□□□ 0.62
HDAC8-213ENST00000436675 UNCXA6NJT0 531 aa18.89■□□□□ 0.61
HDAC8-213ENST00000436675 IFIT5Q13325 482 aaKnown RBP18.89■□□□□ 0.61
HDAC8-213ENST00000436675 C15orf52Q6ZUT6 534 aaKnown RBP18.89■□□□□ 0.61
HDAC8-213ENST00000436675 CDAN1Q8IWY9 1227 aa18.89■□□□□ 0.61
HDAC8-213ENST00000436675 ZNF594Q96JF6 807 aaPredicted RBP18.89■□□□□ 0.61
HDAC8-213ENST00000436675 TRIOBPQ9H2D6 2365 aa18.89■□□□□ 0.61
HDAC8-213ENST00000436675 TESPA1A2RU30 521 aaPredicted RBP18.88■□□□□ 0.61
HDAC8-213ENST00000436675 FOXO4P98177 505 aa18.88■□□□□ 0.61
HDAC8-213ENST00000436675 LINS1Q8NG48 757 aa18.88■□□□□ 0.61
HDAC8-213ENST00000436675 TDRD3Q9H7E2 651 aaKnown RBP18.88■□□□□ 0.61
HDAC8-213ENST00000436675 ZNF70Q9UC06 446 aaPredicted RBP18.88■□□□□ 0.61
HDAC8-213ENST00000436675 PTCH2Q9Y6C5 1203 aa18.88■□□□□ 0.61
HDAC8-213ENST00000436675 ZSWIM8A7E2V4 1837 aa18.87■□□□□ 0.61
HDAC8-213ENST00000436675 FXR1P51114 621 aaKnown RBP eCLIP18.87■□□□□ 0.61
HDAC8-213ENST00000436675 FKBP1AP62942 108 aaKnown RBP18.87■□□□□ 0.61
HDAC8-213ENST00000436675 TAF1CQ15572 869 aaPredicted RBP18.87■□□□□ 0.61
HDAC8-213ENST00000436675 BRI3BPQ8WY22 251 aa18.87■□□□□ 0.61
HDAC8-213ENST00000436675 ZNF333Q96JL9 665 aa18.87■□□□□ 0.61
HDAC8-213ENST00000436675 MS4A4AQ96JQ5 239 aa18.87■□□□□ 0.61
HDAC8-213ENST00000436675 CCL15-CCL14A0A0B4J2E2 113 aa18.86■□□□□ 0.61
HDAC8-213ENST00000436675 TCP10L2B9ZVM9 353 aa18.86■□□□□ 0.61
HDAC8-213ENST00000436675 CCL15Q16663 113 aa18.86■□□□□ 0.61
HDAC8-213ENST00000436675 SLC4A8Q2Y0W8 1093 aa18.86■□□□□ 0.61
HDAC8-213ENST00000436675 SLC9C1Q4G0N8 1177 aa18.86■□□□□ 0.61
HDAC8-213ENST00000436675 TAF7LQ5H9L4 462 aa18.86■□□□□ 0.61
HDAC8-213ENST00000436675 TTF2Q9UNY4 1162 aaKnown RBP18.86■□□□□ 0.61
HDAC8-213ENST00000436675 CACNA1FO60840 1977 aa18.86■□□□□ 0.61
HDAC8-213ENST00000436675 F6X3S4 739 aa18.85■□□□□ 0.61
HDAC8-213ENST00000436675 ECM2O94769 699 aaPredicted RBP18.85■□□□□ 0.61
HDAC8-213ENST00000436675 SPDYE2Q495Y8 402 aa18.85■□□□□ 0.61
HDAC8-213ENST00000436675 EPHA10Q5JZY3 1008 aa18.85■□□□□ 0.61
HDAC8-213ENST00000436675 MFSD14BQ5SR56 506 aa18.85■□□□□ 0.61
HDAC8-213ENST00000436675 LMBR1LQ6UX01 489 aa18.85■□□□□ 0.61
HDAC8-213ENST00000436675 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.85■□□□□ 0.61
HDAC8-213ENST00000436675 TMEM39BQ9GZU3 492 aa18.85■□□□□ 0.61
HDAC8-213ENST00000436675 ZFYVE28Q9HCC9 887 aa18.85■□□□□ 0.61
HDAC8-213ENST00000436675 CNNM1Q9NRU3 951 aa18.85■□□□□ 0.61
HDAC8-213ENST00000436675 COLQQ9Y215 455 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms