RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 PI4K2BQ8TCG2 481 aa20.52■□□□□ 0.88
CALD1-209ENST00000436461 JDP2Q8WYK2 163 aa20.52■□□□□ 0.88
CALD1-209ENST00000436461 VPS33BQ9H267 617 aa20.52■□□□□ 0.88
CALD1-209ENST00000436461 MAP4K4O95819 1239 aaPredicted RBP20.51■□□□□ 0.87
CALD1-209ENST00000436461 EDC3Q96F86 508 aaKnown RBP20.51■□□□□ 0.87
CALD1-209ENST00000436461 GPATCH3Q96I76 525 aa20.51■□□□□ 0.87
CALD1-209ENST00000436461 GNL3LQ9NVN8 582 aaKnown RBP20.51■□□□□ 0.87
CALD1-209ENST00000436461 HMG20BQ9P0W2 317 aa20.51■□□□□ 0.87
CALD1-209ENST00000436461 RAD17O75943 681 aa20.5■□□□□ 0.87
CALD1-209ENST00000436461 GTF2IP78347 998 aa20.5■□□□□ 0.87
CALD1-209ENST00000436461 DNAJC2Q99543 621 aaKnown RBP20.5■□□□□ 0.87
CALD1-209ENST00000436461 MXD3Q9BW11 206 aa20.5■□□□□ 0.87
CALD1-209ENST00000436461 STAP2Q9UGK3 403 aa20.5■□□□□ 0.87
CALD1-209ENST00000436461 PSME4Q14997 1843 aa20.5■□□□□ 0.87
CALD1-209ENST00000436461 TTC41PQ6P2S7 1318 aa20.5■□□□□ 0.87
CALD1-209ENST00000436461 UQCRFS1P1P0C7P4 283 aa20.49■□□□□ 0.87
CALD1-209ENST00000436461 ATP5JP18859 108 aa20.49■□□□□ 0.87
CALD1-209ENST00000436461 ZAP70P43403 619 aa20.49■□□□□ 0.87
CALD1-209ENST00000436461 PODNQ7Z5L7 613 aa20.49■□□□□ 0.87
CALD1-209ENST00000436461 ZNRF3Q9ULT6 936 aa20.49■□□□□ 0.87
CALD1-209ENST00000436461 SPATA5Q8NB90 893 aa20.49■□□□□ 0.87
CALD1-209ENST00000436461 DCAF8L1A6NGE4 600 aa20.48■□□□□ 0.87
CALD1-209ENST00000436461 TBC1D9Q6ZT07 1266 aa20.48■□□□□ 0.87
CALD1-209ENST00000436461 ZNF512BQ96KM6 892 aaPredicted RBP20.48■□□□□ 0.87
CALD1-209ENST00000436461 ANTXR1Q9H6X2 564 aa20.48■□□□□ 0.87
CALD1-209ENST00000436461 DENND2AQ9ULE3 1009 aa20.48■□□□□ 0.87
CALD1-209ENST00000436461 ZNF541Q9H0D2 1346 aa20.48■□□□□ 0.87
CALD1-209ENST00000436461 CXCL9Q07325 125 aa20.47■□□□□ 0.87
CALD1-209ENST00000436461 TTLL5Q6EMB2 1281 aa20.47■□□□□ 0.87
CALD1-209ENST00000436461 OSBPL3Q9H4L5 887 aa20.47■□□□□ 0.87
CALD1-209ENST00000436461 FZD9O00144 591 aa20.46■□□□□ 0.87
CALD1-209ENST00000436461 ERC2O15083 957 aa20.46■□□□□ 0.87
CALD1-209ENST00000436461 GLRX3O76003 335 aaKnown RBP20.46■□□□□ 0.87
CALD1-209ENST00000436461 CYP2E1P05181 493 aaPredicted RBP20.46■□□□□ 0.87
CALD1-209ENST00000436461 HAUS7Q99871 368 aa20.46■□□□□ 0.87
CALD1-209ENST00000436461 GOLIM4O00461 696 aa20.45■□□□□ 0.87
CALD1-209ENST00000436461 PSMD14O00487 310 aa20.45■□□□□ 0.87
CALD1-209ENST00000436461 GSPT1P15170 499 aaKnown RBP20.45■□□□□ 0.87
CALD1-209ENST00000436461 GRIK5Q16478 980 aa20.45■□□□□ 0.87
CALD1-209ENST00000436461 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.45■□□□□ 0.87
CALD1-209ENST00000436461 USP17L3A6NCW0 530 aa20.45■□□□□ 0.86
CALD1-209ENST00000436461 USP17L4A6NCW7 530 aa20.45■□□□□ 0.86
CALD1-209ENST00000436461 SEMA3EO15041 775 aa20.45■□□□□ 0.86
CALD1-209ENST00000436461 USP17L1Q7RTZ2 530 aa20.45■□□□□ 0.86
CALD1-209ENST00000436461 CERS5Q8N5B7 392 aa20.45■□□□□ 0.86
CALD1-209ENST00000436461 AK9Q5TCS8 1911 aa20.44■□□□□ 0.86
CALD1-209ENST00000436461 MFSD14BQ5SR56 506 aa20.44■□□□□ 0.86
CALD1-209ENST00000436461 DACT2Q5SW24 774 aa20.44■□□□□ 0.86
CALD1-209ENST00000436461 TTC22Q5TAA0 569 aa20.44■□□□□ 0.86
CALD1-209ENST00000436461 PIH1D3Q9NQM4 214 aaKnown RBP20.44■□□□□ 0.86
CALD1-209ENST00000436461 ABCF2Q9UG63 623 aa20.44■□□□□ 0.86
CALD1-209ENST00000436461 ZBTB12Q9Y330 459 aaPredicted RBP20.44■□□□□ 0.86
CALD1-209ENST00000436461 AOX1Q06278 1338 aa20.44■□□□□ 0.86
CALD1-209ENST00000436461 FAM205AQ6ZU69 1335 aa20.44■□□□□ 0.86
CALD1-209ENST00000436461 EIF6P56537 245 aaKnown RBP20.43■□□□□ 0.86
CALD1-209ENST00000436461 STRIP1Q5VSL9 837 aa20.43■□□□□ 0.86
CALD1-209ENST00000436461 CIAPIN1Q6FI81 312 aa20.43■□□□□ 0.86
CALD1-209ENST00000436461 PAG1Q9NWQ8 432 aa20.43■□□□□ 0.86
CALD1-209ENST00000436461 GJA3Q9Y6H8 435 aa20.43■□□□□ 0.86
CALD1-209ENST00000436461 DOCK2Q92608 1830 aa20.43■□□□□ 0.86
CALD1-209ENST00000436461 PRDX5P30044 214 aa20.42■□□□□ 0.86
CALD1-209ENST00000436461 TRIM6-TRIM34B2RNG4 842 aa20.42■□□□□ 0.86
CALD1-209ENST00000436461 F8W031 263 aaPredicted RBP20.42■□□□□ 0.86
CALD1-209ENST00000436461 WDR66Q8TBY9 1149 aa20.42■□□□□ 0.86
CALD1-209ENST00000436461 CHGBP05060 677 aa20.41■□□□□ 0.86
CALD1-209ENST00000436461 PDS5AQ29RF7 1337 aaKnown RBP20.41■□□□□ 0.86
CALD1-209ENST00000436461 ADAMTSL1Q8N6G6 1762 aa20.41■□□□□ 0.86
CALD1-209ENST00000436461 RILPL2Q969X0 211 aa20.41■□□□□ 0.86
CALD1-209ENST00000436461 MYH7P12883 1935 aa20.4■□□□□ 0.86
CALD1-209ENST00000436461 VIL1P09327 827 aaKnown RBP20.4■□□□□ 0.86
CALD1-209ENST00000436461 RSBN1LQ6PCB5 846 aaPredicted RBP20.4■□□□□ 0.86
CALD1-209ENST00000436461 ZBTB22O15209 634 aa20.39■□□□□ 0.86
CALD1-209ENST00000436461 IDH1O75874 414 aaKnown RBP20.39■□□□□ 0.86
CALD1-209ENST00000436461 DDNO94850 711 aaPredicted RBP20.39■□□□□ 0.86
CALD1-209ENST00000436461 SLFNL1Q499Z3 407 aa20.39■□□□□ 0.86
CALD1-209ENST00000436461 KIAA0825Q8IV33 1275 aa20.39■□□□□ 0.86
CALD1-209ENST00000436461 SALL1Q9NSC2 1324 aa20.39■□□□□ 0.85
CALD1-209ENST00000436461 SHTN1A0MZ66 631 aa20.38■□□□□ 0.85
CALD1-209ENST00000436461 SDSP20132 328 aa20.38■□□□□ 0.85
CALD1-209ENST00000436461 TBC1D22AQ8WUA7 517 aa20.38■□□□□ 0.85
CALD1-209ENST00000436461 LRP2BPQ9P2M1 347 aa20.38■□□□□ 0.85
CALD1-209ENST00000436461 TNIP1Q15025 636 aa20.38■□□□□ 0.85
CALD1-209ENST00000436461 RAI14Q9P0K7 980 aa20.38■□□□□ 0.85
CALD1-209ENST00000436461 LDHBP07195 334 aaKnown RBP20.37■□□□□ 0.85
CALD1-209ENST00000436461 ERICH6Q7L0X2 663 aa20.37■□□□□ 0.85
CALD1-209ENST00000436461 ZNF384Q8TF68 577 aa20.37■□□□□ 0.85
CALD1-209ENST00000436461 FSD1Q9BTV5 496 aa20.37■□□□□ 0.85
CALD1-209ENST00000436461 MYH2Q9UKX2 1941 aa20.37■□□□□ 0.85
CALD1-209ENST00000436461 MAST2Q6P0Q8 1798 aa20.36■□□□□ 0.85
CALD1-209ENST00000436461 GMPSP49915 693 aaPredicted RBP20.36■□□□□ 0.85
CALD1-209ENST00000436461 SCNN1DP51172 638 aa20.36■□□□□ 0.85
CALD1-209ENST00000436461 TTF1Q15361 905 aaPredicted RBP20.36■□□□□ 0.85
CALD1-209ENST00000436461 CNTROBQ8N137 903 aa20.36■□□□□ 0.85
CALD1-209ENST00000436461 ZGPATQ8N5A5 531 aaKnown RBP20.36■□□□□ 0.85
CALD1-209ENST00000436461 KBTBD3Q8NAB2 608 aa20.36■□□□□ 0.85
CALD1-209ENST00000436461 EVI5LQ96CN4 794 aa20.36■□□□□ 0.85
CALD1-209ENST00000436461 GMLQ99445 158 aa20.36■□□□□ 0.85
CALD1-209ENST00000436461 TTF2Q9UNY4 1162 aaKnown RBP20.36■□□□□ 0.85
CALD1-209ENST00000436461 MECOMQ03112 1051 aa20.35■□□□□ 0.85
CALD1-209ENST00000436461 DIXDC1Q155Q3 683 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms