RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 MYH16Q9H6N6 1097 aa17.37■□□□□ 0.37
LINC00028-201ENST00000435497 AOX1Q06278 1338 aa17.37■□□□□ 0.37
LINC00028-201ENST00000435497 CACNA1FO60840 1977 aa17.37■□□□□ 0.37
LINC00028-201ENST00000435497 SSC5DA1L4H1 1573 aa17.36■□□□□ 0.37
LINC00028-201ENST00000435497 PRMT6Q96LA8 375 aaPredicted RBP17.36■□□□□ 0.37
LINC00028-201ENST00000435497 IL16Q14005 1332 aa17.36■□□□□ 0.37
LINC00028-201ENST00000435497 VAMP4O75379 141 aa17.35■□□□□ 0.37
LINC00028-201ENST00000435497 IL1R1P14778 569 aa17.35■□□□□ 0.37
LINC00028-201ENST00000435497 INHBEP58166 350 aa17.35■□□□□ 0.37
LINC00028-201ENST00000435497 CFAP100Q494V2 611 aa17.35■□□□□ 0.37
LINC00028-201ENST00000435497 IFNL1Q8IU54 200 aa17.35■□□□□ 0.37
LINC00028-201ENST00000435497 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.35■□□□□ 0.37
LINC00028-201ENST00000435497 COL1A1P02452 1464 aaPredicted RBP17.35■□□□□ 0.37
LINC00028-201ENST00000435497 HTTP42858 3142 aa17.34■□□□□ 0.37
LINC00028-201ENST00000435497 CLRN2A0PK11 232 aa17.34■□□□□ 0.37
LINC00028-201ENST00000435497 MANSC4A6NHS7 340 aaPredicted RBP17.34■□□□□ 0.37
LINC00028-201ENST00000435497 F8W031 263 aaPredicted RBP17.34■□□□□ 0.37
LINC00028-201ENST00000435497 IGF2BP3O00425 579 aaKnown RBP eCLIP17.34■□□□□ 0.37
LINC00028-201ENST00000435497 ALDH1A1P00352 501 aa17.34■□□□□ 0.37
LINC00028-201ENST00000435497 KIAA0100Q14667 2235 aaKnown RBP17.34■□□□□ 0.37
LINC00028-201ENST00000435497 EPHA10Q5JZY3 1008 aa17.34■□□□□ 0.37
LINC00028-201ENST00000435497 NBPF12Q5TAG4 269 aaPredicted RBP17.34■□□□□ 0.37
LINC00028-201ENST00000435497 WNK4Q96J92 1243 aa17.34■□□□□ 0.37
LINC00028-201ENST00000435497 ECM29Q5VYK3 1845 aa17.33■□□□□ 0.37
LINC00028-201ENST00000435497 A0A1B0GUL6 1792 aa17.33■□□□□ 0.37
LINC00028-201ENST00000435497 SPDYE2BA6NHP3 402 aa17.33■□□□□ 0.36
LINC00028-201ENST00000435497 F6X3S4 739 aa17.33■□□□□ 0.36
LINC00028-201ENST00000435497 PPP1R12BO60237 982 aaPredicted RBP17.33■□□□□ 0.36
LINC00028-201ENST00000435497 USP2O75604 605 aaPredicted RBP17.33■□□□□ 0.36
LINC00028-201ENST00000435497 SPDYE6P0CI01 402 aa17.33■□□□□ 0.36
LINC00028-201ENST00000435497 ZBTB48P10074 688 aaPredicted RBP17.33■□□□□ 0.36
LINC00028-201ENST00000435497 GJA5P36382 358 aa17.33■□□□□ 0.36
LINC00028-201ENST00000435497 FKBP1AP62942 108 aaKnown RBP17.33■□□□□ 0.36
LINC00028-201ENST00000435497 IFIT5Q13325 482 aaKnown RBP17.33■□□□□ 0.36
LINC00028-201ENST00000435497 BEND3Q5T5X7 828 aa17.33■□□□□ 0.36
LINC00028-201ENST00000435497 JAG2Q9Y219 1238 aa17.33■□□□□ 0.36
LINC00028-201ENST00000435497 PPP2R3BQ9Y5P8 575 aa17.33■□□□□ 0.36
LINC00028-201ENST00000435497 MKI67P46013 3256 aaKnown RBP17.32■□□□□ 0.36
LINC00028-201ENST00000435497 FANCIQ9NVI1 1328 aa17.32■□□□□ 0.36
LINC00028-201ENST00000435497 NCBP3Q53F19 620 aaKnown RBP17.32■□□□□ 0.36
LINC00028-201ENST00000435497 LMBR1LQ6UX01 489 aa17.32■□□□□ 0.36
LINC00028-201ENST00000435497 OTOP1Q7RTM1 612 aa17.32■□□□□ 0.36
LINC00028-201ENST00000435497 ZNF594Q96JF6 807 aaPredicted RBP17.32■□□□□ 0.36
LINC00028-201ENST00000435497 UNCXA6NJT0 531 aa17.31■□□□□ 0.36
LINC00028-201ENST00000435497 SUPT20HL1Q3ZLR7 823 aa17.31■□□□□ 0.36
LINC00028-201ENST00000435497 ZNF804AQ7Z570 1209 aa17.31■□□□□ 0.36
LINC00028-201ENST00000435497 CHMP3Q9Y3E7 222 aa17.31■□□□□ 0.36
LINC00028-201ENST00000435497 TRIM17Q9Y577 477 aa17.31■□□□□ 0.36
LINC00028-201ENST00000435497 CENPFP49454 3210 aa17.31■□□□□ 0.36
LINC00028-201ENST00000435497 LAMB1P07942 1786 aa17.3■□□□□ 0.36
LINC00028-201ENST00000435497 PLIN1O60240 522 aa17.3■□□□□ 0.36
LINC00028-201ENST00000435497 CAP1Q01518 475 aa17.3■□□□□ 0.36
LINC00028-201ENST00000435497 EXOSC9Q06265 439 aaKnown RBP17.3■□□□□ 0.36
LINC00028-201ENST00000435497 RASA3Q14644 834 aa17.3■□□□□ 0.36
LINC00028-201ENST00000435497 PTPN18Q99952 460 aa17.3■□□□□ 0.36
LINC00028-201ENST00000435497 VEZTQ9HBM0 779 aa17.3■□□□□ 0.36
LINC00028-201ENST00000435497 FAM205AQ6ZU69 1335 aa17.29■□□□□ 0.36
LINC00028-201ENST00000435497 POTEFA5A3E0 1075 aa17.29■□□□□ 0.36
LINC00028-201ENST00000435497 MYO1BO43795 1136 aa17.29■□□□□ 0.36
LINC00028-201ENST00000435497 LDHAL6AQ6ZMR3 332 aa17.29■□□□□ 0.36
LINC00028-201ENST00000435497 TESPA1A2RU30 521 aaPredicted RBP17.28■□□□□ 0.36
LINC00028-201ENST00000435497 IREB2P48200 963 aaKnown RBP17.28■□□□□ 0.36
LINC00028-201ENST00000435497 CRHR2Q13324 411 aa17.28■□□□□ 0.36
LINC00028-201ENST00000435497 TDRD7Q8NHU6 1098 aaKnown RBP17.28■□□□□ 0.36
LINC00028-201ENST00000435497 SPINK5Q9NQ38 1064 aaPredicted RBP17.28■□□□□ 0.36
LINC00028-201ENST00000435497 SALL2Q9Y467 1007 aaPredicted RBP17.28■□□□□ 0.36
LINC00028-201ENST00000435497 RBM5P52756 815 aaKnown RBP eCLIP17.27■□□□□ 0.36
LINC00028-201ENST00000435497 CCDC57Q2TAC2 916 aa17.27■□□□□ 0.36
LINC00028-201ENST00000435497 WDR63Q8IWG1 891 aa17.27■□□□□ 0.36
LINC00028-201ENST00000435497 CDAN1Q8IWY9 1227 aa17.27■□□□□ 0.36
LINC00028-201ENST00000435497 ANKRD13AQ8IZ07 590 aa17.27■□□□□ 0.36
LINC00028-201ENST00000435497 CD99L2Q8TCZ2 262 aa17.27■□□□□ 0.36
LINC00028-201ENST00000435497 FAM84BQ96KN1 310 aaPredicted RBP17.27■□□□□ 0.36
LINC00028-201ENST00000435497 TEPSINQ96N21 525 aa17.27■□□□□ 0.36
LINC00028-201ENST00000435497 ZNF70Q9UC06 446 aaPredicted RBP17.27■□□□□ 0.36
LINC00028-201ENST00000435497 PTPN22Q9Y2R2 807 aa17.27■□□□□ 0.36
LINC00028-201ENST00000435497 GRM8O00222 908 aa17.26■□□□□ 0.35
LINC00028-201ENST00000435497 SPDYE2Q495Y8 402 aa17.26■□□□□ 0.35
LINC00028-201ENST00000435497 INTS3Q68E01 1043 aaKnown RBP17.26■□□□□ 0.35
LINC00028-201ENST00000435497 MS4A4AQ96JQ5 239 aa17.26■□□□□ 0.35
LINC00028-201ENST00000435497 PUS3Q9BZE2 481 aaKnown RBP17.26■□□□□ 0.35
LINC00028-201ENST00000435497 TDRD3Q9H7E2 651 aaKnown RBP17.26■□□□□ 0.35
LINC00028-201ENST00000435497 CNNM1Q9NRU3 951 aa17.26■□□□□ 0.35
LINC00028-201ENST00000435497 GYG1P46976 350 aa17.25■□□□□ 0.35
LINC00028-201ENST00000435497 UBE4AQ14139 1066 aa17.25■□□□□ 0.35
LINC00028-201ENST00000435497 MFSD14BQ5SR56 506 aa17.25■□□□□ 0.35
LINC00028-201ENST00000435497 ERO1AQ96HE7 468 aa17.25■□□□□ 0.35
LINC00028-201ENST00000435497 KAZALD1Q96I82 304 aa17.25■□□□□ 0.35
LINC00028-201ENST00000435497 ELP3Q9H9T3 547 aa17.25■□□□□ 0.35
LINC00028-201ENST00000435497 SERPINA10Q9UK55 444 aa17.25■□□□□ 0.35
LINC00028-201ENST00000435497 TTF2Q9UNY4 1162 aaKnown RBP17.25■□□□□ 0.35
LINC00028-201ENST00000435497 BRCA2P51587 3418 aa17.24■□□□□ 0.35
LINC00028-201ENST00000435497 OTOFQ9HC10 1997 aa17.24■□□□□ 0.35
LINC00028-201ENST00000435497 HIBADHP31937 336 aaKnown RBP17.24■□□□□ 0.35
LINC00028-201ENST00000435497 SP3Q02447 781 aa17.24■□□□□ 0.35
LINC00028-201ENST00000435497 GRIK5Q16478 980 aa17.24■□□□□ 0.35
LINC00028-201ENST00000435497 TAF7LQ5H9L4 462 aa17.24■□□□□ 0.35
LINC00028-201ENST00000435497 OTUD7BQ6GQQ9 843 aa17.24■□□□□ 0.35
LINC00028-201ENST00000435497 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.24■□□□□ 0.35
LINC00028-201ENST00000435497 DZIP1LQ8IYY4 767 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms