RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 CD163Q86VB7 1156 aa6.12□□□□□ -1.43
LINC01239-201ENST00000433645 SEC31BQ9NQW1 1179 aa6.12□□□□□ -1.43
LINC01239-201ENST00000433645 SH2B1Q9NRF2 756 aaPredicted RBP6.12□□□□□ -1.43
LINC01239-201ENST00000433645 FAM229AH3BQW9 127 aa6.11□□□□□ -1.43
LINC01239-201ENST00000433645 GADD45BO75293 160 aaPredicted RBP6.11□□□□□ -1.43
LINC01239-201ENST00000433645 TRPA1O75762 1119 aa6.11□□□□□ -1.43
LINC01239-201ENST00000433645 P4HBP07237 508 aaKnown RBP6.11□□□□□ -1.43
LINC01239-201ENST00000433645 MAPK8P45983 427 aa6.11□□□□□ -1.43
LINC01239-201ENST00000433645 GRIA4P48058 902 aa6.11□□□□□ -1.43
LINC01239-201ENST00000433645 IKBKEQ14164 716 aa6.11□□□□□ -1.43
LINC01239-201ENST00000433645 GRM2Q14416 872 aa6.11□□□□□ -1.43
LINC01239-201ENST00000433645 SUZ12Q15022 739 aaKnown RBP6.11□□□□□ -1.43
LINC01239-201ENST00000433645 GRIK4Q16099 956 aa6.11□□□□□ -1.43
LINC01239-201ENST00000433645 NPAS4Q8IUM7 802 aa6.11□□□□□ -1.43
LINC01239-201ENST00000433645 GLIS3Q8NEA6 775 aa6.11□□□□□ -1.43
LINC01239-201ENST00000433645 EPS8L3Q8TE67 593 aaKnown RBP6.11□□□□□ -1.43
LINC01239-201ENST00000433645 ANKRD24Q8TF21 1146 aa6.11□□□□□ -1.43
LINC01239-201ENST00000433645 MRPL18Q9H0U6 180 aaKnown RBP6.11□□□□□ -1.43
LINC01239-201ENST00000433645 CLEC4MQ9H2X3 399 aaPredicted RBP6.11□□□□□ -1.43
LINC01239-201ENST00000433645 ABCB6Q9NP58 842 aa6.11□□□□□ -1.43
LINC01239-201ENST00000433645 TMEM238LA0A1B0GVL6 79 aa6.1□□□□□ -1.43
LINC01239-201ENST00000433645 PRPF40AO75400 957 aaKnown RBP6.1□□□□□ -1.43
LINC01239-201ENST00000433645 ESRRAP11474 423 aaPredicted RBP6.1□□□□□ -1.43
LINC01239-201ENST00000433645 CD68P34810 354 aaPredicted RBP6.1□□□□□ -1.43
LINC01239-201ENST00000433645 CHRNA4P43681 627 aa6.1□□□□□ -1.43
LINC01239-201ENST00000433645 C19orf57Q0VDD7 668 aa6.1□□□□□ -1.43
LINC01239-201ENST00000433645 DDX54Q8TDD1 881 aaKnown RBP6.1□□□□□ -1.43
LINC01239-201ENST00000433645 ASAP3Q8TDY4 903 aa6.1□□□□□ -1.43
LINC01239-201ENST00000433645 SOX1O00570 391 aaPredicted RBP6.09□□□□□ -1.43
LINC01239-201ENST00000433645 MSTNO14793 375 aa6.09□□□□□ -1.43
LINC01239-201ENST00000433645 B3GALT4O96024 378 aa6.09□□□□□ -1.43
LINC01239-201ENST00000433645 LDHBP07195 334 aaKnown RBP6.09□□□□□ -1.43
LINC01239-201ENST00000433645 MBTPS1Q14703 1052 aa6.09□□□□□ -1.43
LINC01239-201ENST00000433645 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.09□□□□□ -1.43
LINC01239-201ENST00000433645 EAPPQ56P03 285 aaPredicted RBP6.09□□□□□ -1.43
LINC01239-201ENST00000433645 TMCO4Q5TGY1 634 aa6.09□□□□□ -1.43
LINC01239-201ENST00000433645 GALNT11Q8NCW6 608 aa6.09□□□□□ -1.43
LINC01239-201ENST00000433645 ZNF576Q9H609 170 aa6.09□□□□□ -1.43
LINC01239-201ENST00000433645 SPG7Q9UQ90 795 aa6.09□□□□□ -1.43
LINC01239-201ENST00000433645 PROCP04070 461 aa6.08□□□□□ -1.44
LINC01239-201ENST00000433645 GATA4P43694 442 aa6.08□□□□□ -1.44
LINC01239-201ENST00000433645 PCDH1Q08174 1060 aa6.08□□□□□ -1.44
LINC01239-201ENST00000433645 Q6ZS46 218 aa6.08□□□□□ -1.44
LINC01239-201ENST00000433645 TXNRD3Q86VQ6 643 aa6.08□□□□□ -1.44
LINC01239-201ENST00000433645 SPOCK3Q9BQ16 436 aa6.08□□□□□ -1.44
LINC01239-201ENST00000433645 BCO2Q9BYV7 579 aa6.08□□□□□ -1.44
LINC01239-201ENST00000433645 USP21Q9UK80 565 aa6.08□□□□□ -1.44
LINC01239-201ENST00000433645 METTL12A8MUP2 240 aa6.07□□□□□ -1.44
LINC01239-201ENST00000433645 F8W735 103 aaPredicted RBP6.07□□□□□ -1.44
LINC01239-201ENST00000433645 GNA15P30679 374 aa6.07□□□□□ -1.44
LINC01239-201ENST00000433645 GSTT1P30711 240 aa6.07□□□□□ -1.44
LINC01239-201ENST00000433645 ITGAEP38570 1179 aa6.07□□□□□ -1.44
LINC01239-201ENST00000433645 SPRED3Q2MJR0 410 aa6.07□□□□□ -1.44
LINC01239-201ENST00000433645 FOXD4L6Q3SYB3 417 aaPredicted RBP6.07□□□□□ -1.44
LINC01239-201ENST00000433645 SHISA2Q6UWI4 295 aa6.07□□□□□ -1.44
LINC01239-201ENST00000433645 FOXD4L3Q6VB84 417 aaPredicted RBP6.07□□□□□ -1.44
LINC01239-201ENST00000433645 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.07□□□□□ -1.44
LINC01239-201ENST00000433645 FBXO33Q7Z6M2 555 aa6.07□□□□□ -1.44
LINC01239-201ENST00000433645 KLHDC7BQ96G42 594 aa6.07□□□□□ -1.44
LINC01239-201ENST00000433645 PPM1HQ9ULR3 514 aa6.07□□□□□ -1.44
LINC01239-201ENST00000433645 MEGF11A6BM72 1044 aa6.06□□□□□ -1.44
LINC01239-201ENST00000433645 ZNF423Q2M1K9 1284 aa6.06□□□□□ -1.44
LINC01239-201ENST00000433645 HP1BP3Q5SSJ5 553 aaPredicted RBP6.06□□□□□ -1.44
LINC01239-201ENST00000433645 GPAT2Q6NUI2 795 aa6.06□□□□□ -1.44
LINC01239-201ENST00000433645 TXNDC11Q6PKC3 985 aa6.06□□□□□ -1.44
LINC01239-201ENST00000433645 NXPE4Q6UWF7 544 aa6.06□□□□□ -1.44
LINC01239-201ENST00000433645 NRSN2Q9GZP1 204 aa6.06□□□□□ -1.44
LINC01239-201ENST00000433645 C12orf49Q9H741 205 aa6.06□□□□□ -1.44
LINC01239-201ENST00000433645 AKTIPQ9H8T0 292 aa6.06□□□□□ -1.44
LINC01239-201ENST00000433645 FAM8A1Q9UBU6 413 aa6.06□□□□□ -1.44
LINC01239-201ENST00000433645 CYP11A1P05108 521 aa6.05□□□□□ -1.44
LINC01239-201ENST00000433645 PI16Q6UXB8 463 aa6.05□□□□□ -1.44
LINC01239-201ENST00000433645 DTHD1Q6ZMT9 781 aa6.05□□□□□ -1.44
LINC01239-201ENST00000433645 DZIP1LQ8IYY4 767 aaKnown RBP6.05□□□□□ -1.44
LINC01239-201ENST00000433645 C3orf58Q8NDZ4 430 aa6.05□□□□□ -1.44
LINC01239-201ENST00000433645 WFDC12Q8WWY7 111 aa6.05□□□□□ -1.44
LINC01239-201ENST00000433645 SSBP4Q9BWG4 385 aaPredicted RBP6.05□□□□□ -1.44
LINC01239-201ENST00000433645 CARD10Q9BWT7 1032 aa6.05□□□□□ -1.44
LINC01239-201ENST00000433645 OSBPL7Q9BZF2 842 aa6.05□□□□□ -1.44
LINC01239-201ENST00000433645 WWC3Q9ULE0 1092 aa6.05□□□□□ -1.44
LINC01239-201ENST00000433645 ADAM11O75078 769 aa6.04□□□□□ -1.44
LINC01239-201ENST00000433645 CDC25BP30305 580 aa6.04□□□□□ -1.44
LINC01239-201ENST00000433645 AP3B2Q13367 1082 aa6.04□□□□□ -1.44
LINC01239-201ENST00000433645 DUOXA2Q1HG44 320 aa6.04□□□□□ -1.44
LINC01239-201ENST00000433645 FOXD4L4Q8WXT5 416 aaPredicted RBP6.04□□□□□ -1.44
LINC01239-201ENST00000433645 SLC7A3Q8WY07 619 aa6.04□□□□□ -1.44
LINC01239-201ENST00000433645 CEP41Q9BYV8 373 aa6.04□□□□□ -1.44
LINC01239-201ENST00000433645 KCNK4Q9NYG8 393 aa6.04□□□□□ -1.44
LINC01239-201ENST00000433645 AK5Q9Y6K8 562 aa6.04□□□□□ -1.44
LINC01239-201ENST00000433645 SYNGAP1Q96PV0 1343 aa6.03□□□□□ -1.44
LINC01239-201ENST00000433645 NOS3P29474 1203 aa6.03□□□□□ -1.44
LINC01239-201ENST00000433645 FCGRTP55899 365 aa6.03□□□□□ -1.44
LINC01239-201ENST00000433645 DAB2P98082 770 aa6.03□□□□□ -1.44
LINC01239-201ENST00000433645 PPP2R3AQ06190 1150 aa6.03□□□□□ -1.44
LINC01239-201ENST00000433645 UVSSAQ2YD98 709 aa6.03□□□□□ -1.44
LINC01239-201ENST00000433645 ANKRD34AQ69YU3 496 aa6.03□□□□□ -1.44
LINC01239-201ENST00000433645 KIAA1211Q6ZU35 1233 aa6.03□□□□□ -1.44
LINC01239-201ENST00000433645 SETDB2Q96T68 719 aa6.03□□□□□ -1.44
LINC01239-201ENST00000433645 DUSP9Q99956 384 aaKnown RBP6.03□□□□□ -1.44
LINC01239-201ENST00000433645 CEP44Q9C0F1 390 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms